# STOCKHOLM 1.0
#=GF ID 3.40.800.20/FF/000030
#=GF DE Histone deacetylase 3, putative
#=GF AC 3.40.800.20/FF/000030
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 67.377
#=GS E3K9M9/25-466                           AC E3K9M9
#=GS E3K9M9/25-466                           OS Puccinia graminis f. sp. tritici CRL 75-36-700-3
#=GS E3K9M9/25-466                           DE Uncharacterized protein
#=GS E3K9M9/25-466                           DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; 
#=GS A0A0D1DVJ3/9-50_90-133_187-464_508-568  AC A0A0D1DVJ3
#=GS A0A0D1DVJ3/9-50_90-133_187-464_508-568  OS Ustilago maydis 521
#=GS A0A0D1DVJ3/9-50_90-133_187-464_508-568  DE Chromosome 12, whole genome shotgun sequence
#=GS A0A0D1DVJ3/9-50_90-133_187-464_508-568  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS E6R5L9/3-51_117-509                     AC E6R5L9
#=GS E6R5L9/3-51_117-509                     OS Cryptococcus gattii WM276
#=GS E6R5L9/3-51_117-509                     DE Histone deacetylase 3, putative
#=GS E6R5L9/3-51_117-509                     DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS Q5K8L3/2-51_118-510                     AC Q5K8L3
#=GS Q5K8L3/2-51_118-510                     OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5K8L3/2-51_118-510                     DE Histone deacetylase 3, putative
#=GS Q5K8L3/2-51_118-510                     DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A225ZDA9/4-51_119-510                 AC A0A225ZDA9
#=GS A0A225ZDA9/4-51_119-510                 OS Cryptococcus neoformans var. grubii c45
#=GS A0A225ZDA9/4-51_119-510                 DE Histone deacetylase 1/2
#=GS A0A225ZDA9/4-51_119-510                 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS Q55M56/46-95_162-554                    AC Q55M56
#=GS Q55M56/46-95_162-554                    OS Cryptococcus neoformans var. neoformans B-3501A
#=GS Q55M56/46-95_162-554                    DE Uncharacterized protein
#=GS Q55M56/46-95_162-554                    DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GF SQ 6
E3K9M9/25-466                                   -------------------KDLDPL-DRLPSNQGRSSAVHNLVSAFGLLREERTDGQDDEPPKNRARVLSTKLASRAELEEFHDPEYVGSLLRGYDDPKIDANNEQDHRSSDLKRNPEISDAHFRSEHDEELEEFGLEHDCPRFSKMAQYVLAVAGAALETSRELREDRADIGIVWDGGRHHAQRSAAAGFCYVNDAALAISELRRQ--------------------PT----NRALKKLDRVLYLDMLDIHHGDGVELAFWSTS----------------RVLTISVHHHDPEGGFYPLSGAVESSGPAPPSP---------AASHALNIPIR---TPGALSYVCRRTILPLISAYKPSALVIQCGVDGLAGDPIGGRLWGFGLKEMGDCLEAVLQDSIAHRRKVLLVGGGGYHTPNVARAWAHFTSIALGRKFDLE---ETEIPLEVEGDVDYGPTYTLDVSGLERASSEQTGAMGCKVIREIWRTIPSCKRSSSNWIDMYPSFKINTLLASLCI
A0A0D1DVJ3/9-50_90-133_187-464_508-568          ------------RVAYIVSAELVKYADLLPSNKGRSSLVHSLAYHLDLLD---LDGL-------RAKVYLPNAATYQQLTSYHEEAFVKQLGKG-------------ARAGDL-------ECTLSKRRLLAKDQFGLQDDCPAFEGLQQHVSLVAGAAITAAELLATGQADIAIAWDGGRHHAKKSSASGFCYINDVVLAILSLRKPRKVTVTTSVPRIQEEEKEKDDVEMIRKTTIKRVDRVLYLDF-DLHWGDGVEEAFHSTS----------------NVLTLSIHHYAP--GFFPCYAA--SANPERFTPPGSLKSDAGAGSRTLNIPLGIGTSDDSLERIMSGTIQPLFEAWDPEIVVVQCGVDGLAGDPMA--V---WNLSAAAYVK-AIQSVLSWNKPVLLLGGGGYNSENAARCWSLLTAVCLGRSLLDTISYDTAIPDHKFWP-KYAPTYTLGVPAGEMI--DQNNEAHFEAISKTF-------------IE-----HVKMVSASR--
E6R5L9/3-51_117-509                             -PDTRFTNRSKIRVSYLWSPSLQRLSDDLPSNVGRSSMVHDLIKSLGLLD--------------TVVLPDPSLGTKTCLIRYHDRSYIERLLKAHTD-------EDPNDPTHLPSSPLSSTSSPRRAKIARTDPYNLSHDNPVFPSLSSYISHIAAATSTACRLLATDETDWAVCWDGGRHHAKRKEAGGFCYVNDLVLGGLLLARE---------GRIPLQLKEGEDV----KRQRTRAPRIFYLDM-DLHYSDGVSAAFHSPTVYPYPMEEGVNPPKPPNVLTLSVHHSSP--IFFP-----------PPTPLSLLPSPGTESPFSLSIPLSAYPSRQTYAKVFNQCIQPIREAWDPDYVILQLGTDGLPGDRVG--QYGNWSVAGEGGIKWVVERVKEWGKKVCVTGGGGYRHDNAARAWAEVMGVLLDRDFEE----DMPIPHHDHFE-QYAPSFTLQVPDSHMR--DENKPEDLEKAAEVFNVL----------AE-----RIKVIVDAN--
Q5K8L3/2-51_118-510                             VPSTSSTNHSAFRVSYLWSPALQRLSDDLPSNVGRSSMVHDLIRSLDLLD--------------TVVFPQPSLGTKACLLKYHDRSYIERLLMAHTD-------RDPNDPTHLPSSPSSSASSPRPAKIARTDPYNLSHDNPVFPTLASYISHVTAATSTACRLLATDKADWAVCWDGGRHHAKRKEAGGFCYVNDLVLGGLLLSRE---------GRIPLPLKEGEDP----KRQRTRAPRILYLDM-DLHYSDGVSAAFHSPTVYPYPLKEGITPPKPPNVLTLSVHHSSP--IFFP-----------PPTPLSLLPSPDTESPFSLSIPLSAYPSRQTYAKVFNQCIQPIREAWDPDYIILQLGTDGLPGDRVG--QYGNWSVDGEGGIKWVVERVKEWGKKVCVTGGGGYRHDNAARAWAEVTGVLLDRDFVE----DMPIPHHDHFE-QYAPSFTLQVPDSHMR--DENKPEDLEKAAEVFNVL----------AE-----RIKIIVDAN--
A0A225ZDA9/4-51_119-510                         --STRLTNRPRLRVSYLWSPSLQRLSDDLPSNVGRSSMVHDLIKSLNLLD--------------TVVFPEPSLGTKACLLRYHDRSYIERLLKADTD-------KDPDDPTHLPSSPSSSTSSPRPAKIARTDPYNLSHDNPVFPTLAPYISHIAAATSTACRLLATDKADWAVCWDGGRHHAKRKEAGGFCYVNDLVLGGLLLSRE---------GRIPIPLKEGEDP----KRQRTRAPRIFYLDM-DLHYSDGVSAAFHSPTVYPYPLKESVSPPKLPNVLTLSIHHSSP--VFFP-----------PPTPISLLPSPNTESPFSLSIPLSAYPSRQTYAKVFNQCIQPIREAWDPDYVILQLGTDGLPGDRVG--QYGNWSIDGEGGIKWVVERVKEWGKKVCVTGGGGYRHDNAARAWAEVMGVLLDRDFEE----DTPIPHHDHFE-QYAPSFTLQVPTSHMR--DENKSEDLEKAAEVFDVL----------AK-----RIKIIVDA---
Q55M56/46-95_162-554                            IPSTSSTNHSAFRVSYLWSPALQRLSDDLPSNVGRSSMVHDLIKSFDLLD--------------TVVFPQPSLGTKACLLKYHDRSYIERLLMAHID-------RDPNDPTHLPSSPSSSASSPRPAKIARTDPYNLSHDNPVFPTLASYISHVTAATSTACRLLATDKADWAVCWDGGRHHAKRKEAGGFCYVNDLVLGGLLLSRE---------GRIPLPLKEGEDP----KRQRTRAPRILYLDM-DLHYSDGVSAAFHSPTVYPYPLKEGITPPKPPNVLTLSVHHSSP--IFFP-----------PPTPLSLLPSPDTESPFSLSIPLSAYPSRQTYAKVFNQCIQPIREAWDPDYIILQLGTDGLPGDRVG--QYGNWSVDGEGGIKWVVERVKEWGKKVCVTGGGGYRHDNAARAWAEVMGVLLDRDFVE----DMPIPHHDHFE-QYAPSFTLQVPDSHMR--DENKPEDLEKAAEVFNVL----------AE-----RIKIIVDAN--
#=GC scorecons                                  0011001111004424324339345293999939999499495346599500001100000000453432645564539237973476449545224000000022234445922341243444533533337475946949394364476537659635646495564793663999999996743949999799469545394740000000002442112442354000065434744966999609694599943995955111111111101111169996969944900397900010010010556922242421244534959964222634444474444959625966943565949599959945600324253343443562656353354759464999994349699596345473959462300007539936332404969579949633553007664334463546552230000000000560000057645445200
#=GC scorecons_70                               _____________________*____*_****_****_**_*_____**_____________________*___*___*__***__**__*_____________________*___________________*_*_*__*_*_*__*__**__**_*___*___*__*_**_**_**********__*_*******_**____*_*___________________________*____*__******__***__***__**_*___________________********__*___***_____________**______________*_***____*______*____*_*___*__*___*_*_*_***_**__*_______________*_*________*_*___*****___****_**____*_*_*_*______*__**________***_***_**_______*_*_____*___*_______________________**________
#=GC scorecons_80                               _____________________*____*_****_****_**_*_____**_____________________________*__***__*___*_____________________*___________________*___*__*_*_*_____*___*__*_______*____**____********_*__*_*******__*____*_*________________________________*__*__***__*_*__***__**_*___________________***_*_**__*___***______________*______________*_**____________*____*_*___*__*_____*_*_***_**_____________________________*_*___*****___*_**_*_____*_*_*________*__**________*_*__**_*________*___________________________________*_________
#=GC scorecons_90                               _____________________*____*_****_****_**_*_____**_____________________________*___*_______*_____________________*_______________________*__*_*_*____________*_______*_____*____********____*_****_**__*____*_____________________________________*__***__*_*__***__**_*___________________***_*_**__*___*_*______________*______________*_**_________________*_*___*__*_____*_*_***_**_______________________________*___*****___*_**_*_______*_*___________**________*_*__**_*______________________________________________________
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