# STOCKHOLM 1.0
#=GF ID 3.40.50.410/FF/000146
#=GF DE ATP-dependent DNA helicase II subunit 2
#=GF AC 3.40.50.410/FF/000146
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 89.459
#=GS Q21829/7-214  AC Q21829
#=GS Q21829/7-214  OS Caenorhabditis elegans
#=GS Q21829/7-214  DE ATP-dependent DNA helicase II subunit 2
#=GS Q21829/7-214  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q21829/7-214  DR GO; GO:0006281; 
#=GS Q7Q190/1-181  AC Q7Q190
#=GS Q7Q190/1-181  OS Anopheles gambiae
#=GS Q7Q190/1-181  DE AGAP009910-PA
#=GS Q7Q190/1-181  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS Q4Q7S5/1-238  AC Q4Q7S5
#=GS Q4Q7S5/1-238  OS Leishmania major
#=GS Q4Q7S5/1-238  DE Putative KU80 protein
#=GS Q4Q7S5/1-238  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS H3G1Z2/9-203  AC H3G1Z2
#=GS H3G1Z2/9-203  OS Pristionchus pacificus
#=GS H3G1Z2/9-203  DE Uncharacterized protein
#=GS H3G1Z2/9-203  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A8XSY4/4-231  AC A8XSY4
#=GS A8XSY4/4-231  OS Caenorhabditis briggsae
#=GS A8XSY4/4-231  DE ATP-dependent DNA helicase II subunit 2
#=GS A8XSY4/4-231  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GF SQ 5
Q21829/7-214          ---SPGITVILIDAGSNMSVKDTETGKSAFENAINAADWIVSRKLFSKDPELFSVMAYNLDPKEYKTEVGGQTFNGVQCQ-------NEKFTPASFDHLKFITKE----LQQNT---EMIDPN---------------FFKGVLGAVAVLKDQIESYPNPSGITLIVLTNGLN-ENIRQENFDLLVEAVSESNADLMIIGIDEN---PEYPASRVAE---------------------------LAETLEGRTYTFQNVAKMLSTFQARQK
Q7Q190/1-181          --------------------------------------------------DHVGIVLFGTDET-----NNQLN---VDSGGYENITEAFELKPPNWQTLRILQNQ----VVQTESEAG--------------------WFDALIVATNFLRNGA-LGKKFTGYSIILLSPLFVAGDIDQGQLESVADGISNMLGVLHVI---TNY--VLHPAASVASIFTTTGTFDEQASKTEARTENERYVRQILDATDGTLANINWAERMLTFFDAK--
Q4Q7S5/1-238          --MSKGAVVLVLDITLPRA--------AALVEACNLCDRILTDKMIYAPSDEVSVILAGTEKS-----RSALYEQSVQAR-YNHITVAAELGPATSLTLAPIAATRAGVAVLPEGETV--RPS---------IAEAYDFIDALQVAVAVLQART--SQKKYNRCIYFLTDARH-EVRHKEDLLSLIDILQRDQVALVVIGFDFQA--LPAPADSQGEFNESTTVVPSAWAALDRKAQNERILAALCTELGPPSTLVSPAEALASLSLLRC-
H3G1Z2/9-203          ----HDISCIIVDVGGTMG--------GEVEEAKNTADWIISRKIFTNSKDEVRLIITGSEEK-----SGDIDRPQVIVH-------GDEFLTARFDMLRYLDRE----VKQSDERST--------------------ITKAMLSAIEAIREESESRNDIDGRQIVLITNGSSASDASKEEINSILGEVKNLGIDVVVIGVNREFNRDGHTVAMVNR---------------------------LEKETEATVMTFSEALKGISHFVRPT-
A8XSY4/4-231          KKSSTGITVMLIDAGVNMNMRSSNNEKTDFENAVHTANSIISRKIFSEDAENFCVMAYNLDSK-FITKLGKETFKGVVVH-------NEEFVPAQFDHLRFLLTE----LKQNTSDGSFSDPNCNGIIYFAKIKVSLPVFKGVLAAVAILKERLELVSNPSGITLIVLTNGMN-ENIRQENYDLLVNAITECNADLMIIGIPEN---PEYPASRISE---------------------------LVDQLGGRTYSFENVSMQLSTYQARQK
#=GC scorecons        0002133222225231221000000002222351323315233523112163535543536340000024233112923301001104276266333395362340000435342322001210000000000000003455543954375433222342362364476432314343664434544353422337369522250002246643434000010000000000000001110000623344433234325232463524510
#=GC scorecons_70     __________________________________________________*_________*_______________*____________*__**____*______________________________________________*___*___________*_____**__________*_______________*_**___________**________________________________*__________________*_______
#=GC scorecons_80     ____________________________________________________________________________*_____________________*______________________________________________*____________________________________________________*________________________________________________________________________
#=GC scorecons_90     ____________________________________________________________________________*_____________________*______________________________________________*____________________________________________________*________________________________________________________________________
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