# STOCKHOLM 1.0
#=GF ID 3.40.50.410/FF/000115
#=GF DE Retroelement pol polyprotein-like
#=GF AC 3.40.50.410/FF/000115
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 36.495
#=GS Q9FF49/252-433      AC Q9FF49
#=GS Q9FF49/252-433      OS Arabidopsis thaliana
#=GS Q9FF49/252-433      DE Retroelement pol polyprotein-like
#=GS Q9FF49/252-433      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FF49/252-433      DR GO; GO:0005886; 
#=GS Q9LN03/205-382      AC Q9LN03
#=GS Q9LN03/205-382      OS Arabidopsis thaliana
#=GS Q9LN03/205-382      DE T6D22.13
#=GS Q9LN03/205-382      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9LN03/205-382      DR GO; GO:0005886; 
#=GS A0A178WEJ2/205-382  AC A0A178WEJ2
#=GS A0A178WEJ2/205-382  OS Arabidopsis thaliana
#=GS A0A178WEJ2/205-382  DE Uncharacterized protein
#=GS A0A178WEJ2/205-382  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS M4CE25/246-427      AC M4CE25
#=GS M4CE25/246-427      OS Brassica rapa subsp. pekinensis
#=GS M4CE25/246-427      DE Uncharacterized protein
#=GS M4CE25/246-427      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A087GCJ5/257-440  AC A0A087GCJ5
#=GS A0A087GCJ5/257-440  OS Arabis alpina
#=GS A0A087GCJ5/257-440  DE Uncharacterized protein
#=GS A0A087GCJ5/257-440  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS A0A1J3F7E2/250-431  AC A0A1J3F7E2
#=GS A0A1J3F7E2/250-431  OS Noccaea caerulescens
#=GS A0A1J3F7E2/250-431  DE Uncharacterized protein
#=GS A0A1J3F7E2/250-431  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS A0A0D3ED84/247-428  AC A0A0D3ED84
#=GS A0A0D3ED84/247-428  OS Brassica oleracea var. oleracea
#=GS A0A0D3ED84/247-428  DE Uncharacterized protein
#=GS A0A0D3ED84/247-428  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS M4DUP1/242-421      AC M4DUP1
#=GS M4DUP1/242-421      OS Brassica rapa subsp. pekinensis
#=GS M4DUP1/242-421      DE Uncharacterized protein
#=GS M4DUP1/242-421      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A0D3AKP0/298-479  AC A0A0D3AKP0
#=GS A0A0D3AKP0/298-479  OS Brassica oleracea var. oleracea
#=GS A0A0D3AKP0/298-479  DE Uncharacterized protein
#=GS A0A0D3AKP0/298-479  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GF SQ 9
Q9FF49/252-433              DLVTVLDVSGSMAGTKLALLKRAMGFVIQNLGPFDRLSVISFSSTARRNFPLRLMTETGKQEALQAVNSLVSNGGTNIAEGLKKGARVLIDRRFKNPVSSIVLLSDGQDTYTM-TSPNG--SRGTDYKALLPKEINGNRIPVHAFGFGADHDASLMHSIAENSGGTFSFIESETVIQDAFAQCIG
Q9LN03/205-382              -LITVLDVSGSMDGVKMELMKNAMSFVIQNLGETDRLSVISFSSMARRLFPLRLMSETGKQAAMQAVNSLVADGGTNIAEGLKIGARVIEGRRWKNPVSGMMLLSDGQDNFTF--SHAGV-RLRTDYESLLPSSC---RIPIHTFGFGSDHDAELMHTISEVSSGTFSFIETETVIQDAFAQCIG
A0A178WEJ2/205-382          -LITVLDVSGSMDGVKMELMKNAMSFVIQNLGETDRLSVISFSSMARRLFPLRLMSETGKQAAMQAVNSLVADGGTNIAEGLKIGARVIEGRRWKNPVSGMMLLSDGQDNFTF--SHAGV-RLRTDYESLLPSSC---RIPIHTFGFGSDHDAELMHTISEVSSGTFSFIETETVIQDAFAQCIG
M4CE25/246-427              DLVTVLDVSGSMAGTKLALLKRAMGFVIQNLGPFDRLSVISFSSTSRRSFPLRLMTETGKQEALQAVNSLVSNGGTNIAEGLMKGAKVLIDRRFKNSVSSIVLLSDGQDTYTM-TSPTGSNTKGTDYKTLLPKEV--NRIPVHAFGFGADHDASLMHSVAENSGGTFSFIESETVIQDAFAQCIG
A0A087GCJ5/257-440          DLVTVLDVSGSMAGTKLALLKRAMGFVIQNLGPFDRLSVISFSSTARRSFPLRLMTETGKQEALQAVNALVSNGGTNIAEGLKKGARVLIDRRFKNPVSSIVLLSDGQDTYTM-TSPTGTSSREASYKTLLPKEINGNRIPVHAFGFGTDHDASLMHSIAENSGGTFSFIESETVIQDAFAQCIG
A0A1J3F7E2/250-431          DLITVLDVSGSMAGSKLALLKRAMGFVIQNLGPFDRLSVISFSSTARRNFPLRLMTETGKQEALQAVNSLVANGGTNIAEGLKKGARVLIDRRFKNPVTSIVLLSDGQDTYTM-TSPTG--SRGKDYKSLLPKEINGNKIPVHAFGFGSDHDASLMHFIAENSGGTFSFIESETVIQDAFAQCIG
A0A0D3ED84/247-428          DLVTVLDVSGSMAGTKLALLKRAMGFVIQNLGPFDRLSVISFSSTARRSFPLRLMTETGKQEALQAVNSLVSNGGTNIAEGLMKGAKVLIERRFKNSVSSIVLLSDGQDTYTM-TSPTGSNTKGADYKTLLPKEV--NRIPVHAFGFGADHDASLMHSIAENSGGTFSFIESETVIQDAFAQCIG
M4DUP1/242-421              DLVTVLDVSGSMAGTKLALLKRAMGFVIQNLGPFDRLSVISFSSTSRRSFPLRLMNETGKQEALQAVNSLVSNGGTNIAEGLKKGAKVLIDRRFKNSVSSIVLLSDGQDTYTMSTSPNG---KGADYKTLLPKEV--NRIPVHAFGFGADHDASLMHSIAENSGGTFSFIESETVIQDAFAQCIG
A0A0D3AKP0/298-479          DIVTVLDVSGSMAGTKLALLKRAMGFVIQNLGPFDRLSVISFSSTSRRSFPLRLMNETGKQEALQAVNSLVSNGGTNIAEGLKKGAKVLIDRRFKNSVSSIVLLTDGQDTYTM-TSPTGGGPKGGDYKTLLPKEV--NRIPVHAFGFGADHDACLMHSIAENSGGTFSFIESETVIQDAFAQCIG
#=GC scorecons              38699999999959596596959969999999559999999999569949999995999995969999799569999999996499796459959969766699799996795039559103455796599955400389979699995999949995869596999999969999999999999
#=GC scorecons_70           _***********_*_**_***_**_*******__**********_***_******_*****_*********_***********_*****__**_**_**_*********_**___*__*______**__***______**********_****_***_*_*_*_*******_*************
#=GC scorecons_80           _*_*********_*_*__*_*_**_*******__**********__**_******_*****_*_*******__*********__**_*___**_**_**___*******_**___*__*______**__***______***_*_****_****_***_*_*_*_*******_*************
#=GC scorecons_90           ___*********_*_*__*_*_**_*******__**********__**_******_*****_*_****_**__*********__**_*___**_**_*____**_****__*___*__*_______*__***______***_*_****_****_***_*_*_*_*******_*************
//