# STOCKHOLM 1.0
#=GF ID 3.40.50.410/FF/000112
#=GF DE TFIIH basal transcription factor subunit
#=GF AC 3.40.50.410/FF/000112
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 40.579
#=GS Q57TV9/1-206      AC Q57TV9
#=GS Q57TV9/1-206      OS Trypanosoma brucei brucei TREU927
#=GS Q57TV9/1-206      DE DNA repair and transcription factor protein, putative
#=GS Q57TV9/1-206      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q57TV9/1-206      DR GO; GO:0005634; GO:0005654; GO:0005675; GO:0005737; GO:0006351; 
#=GS A4HDM8/1-212      AC A4HDM8
#=GS A4HDM8/1-212      OS Leishmania braziliensis
#=GS A4HDM8/1-212      DE Uncharacterized protein
#=GS A4HDM8/1-212      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS E9AX13/1-211      AC E9AX13
#=GS E9AX13/1-211      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AX13/1-211      DE Uncharacterized protein
#=GS E9AX13/1-211      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A0A1G4IEZ7/1-206  AC A0A1G4IEZ7
#=GS A0A1G4IEZ7/1-206  OS Trypanosoma equiperdum
#=GS A0A1G4IEZ7/1-206  DE TFIIH basal transcription factor subunit
#=GS A0A1G4IEZ7/1-206  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A0A1E1J612/1-212  AC A0A1E1J612
#=GS A0A1E1J612/1-212  OS Leishmania guyanensis
#=GS A0A1E1J612/1-212  DE Uncharacterized protein
#=GS A0A1E1J612/1-212  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; 
#=GS E9AH75/1-211      AC E9AH75
#=GS E9AH75/1-211      OS Leishmania infantum
#=GS E9AH75/1-211      DE Ssl1-like_-_putative
#=GS E9AH75/1-211      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS Q4QAG3/1-211      AC Q4QAG3
#=GS Q4QAG3/1-211      OS Leishmania major
#=GS Q4QAG3/1-211      DE Uncharacterized protein
#=GS Q4QAG3/1-211      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS E9BH37/1-211      AC E9BH37
#=GS E9BH37/1-211      OS Leishmania donovani BPK282A1
#=GS E9BH37/1-211      DE Uncharacterized protein
#=GS E9BH37/1-211      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0A088RRQ4/1-212  AC A0A088RRQ4
#=GS A0A088RRQ4/1-212  OS Leishmania panamensis
#=GS A0A088RRQ4/1-212  DE Uncharacterized protein
#=GS A0A088RRQ4/1-212  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS A0A3P3Z839/1-212  AC A0A3P3Z839
#=GS A0A3P3Z839/1-212  OS Leishmania braziliensis MHOM/BR/75/M2904
#=GS A0A3P3Z839/1-212  DE Ssl1-like
#=GS A0A3P3Z839/1-212  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GF SQ 10
Q57TV9/1-206              MLKTVLLLDGSEAVNCSLDYLPTRLIALRPQLNKFVHTYLDANPLASLGVVVMRDGVAQRLIPCTTNATDIVQTLELKYFRFGGSGAMSLENGLRMALSELVDLRRIAKRLRENNSGSTGSDVQ------EDVTSRLRIVLASSSVTIVDPLDVFAVQKIVAQLRVRVDVISFCGAVHVLQEAAVLTGGSLHTPMNYEHLTEILRHLASPEG
A4HDM8/1-212              MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVEGYLDSTPLASLGVVVMRDGISHRLLPCTTNHNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALVSTAAKKSSSIAAVNPRSAWKGSATQLNVIVLTASVTLIDPTDVFAVVNVMAALSIRINVVSLVGAVHVFDVCTAETGGTLYCPLNYGHLLHIVDELSAATS
E9AX13/1-211              MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVERYLDSTPLASLGVVVMRDGISHRLLPCTTNRNEIVDVLERDVFLHGGSGNMSMENGLRVAMSELVDMREVAALAATTAKKSSSVGAQNPRAAWKGSATQLNVIVLTASVTLIDPTDVFAVVNIMAALSIRISVVSLVGAVHVFDVCTVETGGTLYCPLNYDHLLHIMDELSTAH-
A0A1G4IEZ7/1-206          MLKTVLLLDGSEAVNCSLDYLPTRLIALRPQLNKFVHTYLDANPLASLGVVVMRDGVAQRLIPCTTNATDIVQTLELKYFRFGGSGAMSLENGLRMALSELVDLRRIAKRLRENNSGSTGSDVQ------EDVTSRLRIVLASSSVTIVDPLDVFAVQKIVAQLRVRVDVISFCGAVHVLQEAAVLTGGSLHTPMNYEHLTEILRHLASPEG
A0A1E1J612/1-212          MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVEGYLDSTPLASLGVVVMRDGISHRLLPCTTNHNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALVSTAAKKSSSIAAVNPRSAWKGSATQLNVIVLTASVTLIDPTDVFAVVNVMAALSIRINVVSLVGAVHVFDVCTAETGGTLYCPLNYGHLLHIVDELSAATS
E9AH75/1-211              MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVERYLDSTPLASLGVVVMRDGISHRLLPCTTNRNEIVDVLERDVFLHGGSGSTSMENGLRMAMSELVDMREVAALAAATAKKSSSFAARNPRAAWKGSATQLNVIVLTASVTLIDPTDVFAVVNIMAALSIRISVVSLVGAVHVFDVCTVETGGTLYCPLNYDHLLHIMDELSTAH-
Q4QAG3/1-211              MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRFVERYLDSTPLASLGVVVMRDGISHRLLPCTTNRNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALAAATAKKSSSVAARNPRAAWKGSATQLNVIVLTASVTLIDPTDVFAVVNIMAVLSIRISVVSLVGAVHVFDVCTVETGGTLYCPLNYDHLLHIMDELSTAH-
E9BH37/1-211              MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVERYLDSTPLASLGVVVMRDGISHRLLPCTTNRNEIVDVLERDVFLHGGSGSTSMENGLRMAMSELVDMREVAALAAATAKKSSSFAARNPRAAWKGSATQLNVIVLTASVTLIDPTDVFAVVNIMAALSIRISVVSLVGAVHVFDVCTVETGGTLYCPLNYDHLLHIMDELSTAH-
A0A088RRQ4/1-212          MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVEGYLDSTPLASLGVVVMRDGISHRLLPCTTNHNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALVSTAAKKSSSIAAVNPRSAWKGSATQLNVIVLTASVTLIDPTDVFAVVNVMAALSIRINVVSLVGAVHVFDVCTAETGGTLYCPLNYGHLLHIVDELSAATS
A0A3P3Z839/1-212          MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVEGYLDSTPLASLGVVVMRDGISHRLLPCTTNHNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALVSTAAKKSSSIAAVNPRSAWKGSATQLNVIVLTASVTLIDPTDVFAVVNVMAALSIRINVVSLVGAVHVFDVCTAETGGTLYCPLNYGHLLHIVDELSAATS
#=GC scorecons            99699999999696959499995496969959466954999559999999999999656996999994569955994549459999459699999896999996956954444455595534543331335556569566655599966995999994576949569649696499999654566499959659699599559555955542
#=GC scorecons_70         ***************_*_****__******_*_*_*__***__**************_*********__***__**___*__****__*****************_**_________*_______________*_**_***___*******_*****__***_*_***_****_******___**_***_**_****_**__*___*_____
#=GC scorecons_80         **_********_*_*_*_****__*_*_**_*___*__***__*************___**_*****___**__**___*__****__*_*******_*****_*__*_________*__________________*_______***__**_*****__*_*_*__*__*_*__*****_______***_*__*_**_**__*___*_____
#=GC scorecons_90         **_********_*_*_*_****__*_*_**_*___*__***__*************___**_*****___**__**___*__****__*_*******_*****_*__*_________*__________________*_______***__**_*****____*_*__*__*_*__*****_______***_*__*_**_**__*___*_____
//