# STOCKHOLM 1.0
#=GF ID 3.40.50.410/FF/000106
#=GF DE Nitric oxide reductase D protein
#=GF AC 3.40.50.410/FF/000106
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 63.699
#=GS Q603P8/580-764      AC Q603P8
#=GS Q603P8/580-764      OS Methylococcus capsulatus str. Bath
#=GS Q603P8/580-764      DE CbbO protein
#=GS Q603P8/580-764      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus; Methylococcus capsulatus; 
#=GS Q603P8/580-764      DR GO; GO:0019538; 
#=GS Q5LL15/446-629      AC Q5LL15
#=GS Q5LL15/446-629      OS Ruegeria pomeroyi DSS-3
#=GS Q5LL15/446-629      DE Nitric oxide reductase D protein
#=GS Q5LL15/446-629      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria pomeroyi; 
#=GS Q5LL15/446-629      DR GO; GO:0019333; 
#=GS Q51665/446-620      AC Q51665
#=GS Q51665/446-620      OS Paracoccus denitrificans
#=GS Q51665/446-620      DE NorD protein
#=GS Q51665/446-620      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus; Paracoccus denitrificans; 
#=GS Q51665/446-620      DR GO; GO:0016966; 
#=GS A1B4X4/446-620      AC A1B4X4
#=GS A1B4X4/446-620      OS Paracoccus denitrificans PD1222
#=GS A1B4X4/446-620      DE von Willebrand factor, type A
#=GS A1B4X4/446-620      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus; Paracoccus denitrificans; 
#=GS D0CP47/442-631      AC D0CP47
#=GS D0CP47/442-631      OS Ruegeria lacuscaerulensis ITI-1157
#=GS D0CP47/442-631      DE Nitric oxide reductase D protein
#=GS D0CP47/442-631      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria lacuscaerulensis; 
#=GS A0A0N7MAX0/442-628  AC A0A0N7MAX0
#=GS A0A0N7MAX0/442-628  OS Ruegeria denitrificans
#=GS A0A0N7MAX0/442-628  DE Nitric oxide reductase activation protein
#=GS A0A0N7MAX0/442-628  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria denitrificans; 
#=GS A0A0X3TJS6/442-628  AC A0A0X3TJS6
#=GS A0A0X3TJS6/442-628  OS Ruegeria marisrubri
#=GS A0A0X3TJS6/442-628  DE Nitric oxide reductase D protein
#=GS A0A0X3TJS6/442-628  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria marisrubri; 
#=GS A0A1G6UPU3/442-630  AC A0A1G6UPU3
#=GS A0A1G6UPU3/442-630  OS Ruegeria marina
#=GS A0A1G6UPU3/442-630  DE Nitric oxide reductase NorD protein
#=GS A0A1G6UPU3/442-630  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria marina; 
#=GS A0A0C1G8L8/442-628  AC A0A0C1G8L8
#=GS A0A0C1G8L8/442-628  OS Ruegeria sp. ANG-R
#=GS A0A0C1G8L8/442-628  DE Nitric oxide reductase D protein
#=GS A0A0C1G8L8/442-628  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria sp. ANG-R; 
#=GS A0A1X7IG90/447-617  AC A0A1X7IG90
#=GS A0A1X7IG90/447-617  OS Paracoccus sp. J56
#=GS A0A1X7IG90/447-617  DE Nitric oxide reductase NorD protein
#=GS A0A1X7IG90/447-617  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus; Paracoccus sp. J56; 
#=GS A0A099F568/446-620  AC A0A099F568
#=GS A0A099F568/446-620  OS Paracoccus halophilus
#=GS A0A099F568/446-620  DE Nitric oxide reductase D protein
#=GS A0A099F568/446-620  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus; Paracoccus halophilus; 
#=GF SQ 11
Q603P8/580-764              TIR-KTRDLAVLLLLDLSESTNETLPGSDRPIIQLAREACTLLAWAIDGIGDPFAIHGFASDGRHDVQYYRFKDFDQPFDDQAKSRIAGMKGGLSTRMGAAMRHAAHHLRHRPQQRKLLLLVSDGEPADIDERDPQYLRLDTKKAVEELASSGIMTYCLTLDPDADAYVSRIFGPNRYTVVDHVQR------
Q5LL15/446-629              ----VARDLAVSILLDVSRSTESAVSG--RAVIDIEREALAALAWGLDACGDDFAIHAFSSLKRARVYVQRCKGFGEMMSPQVEARIASLRPGFYTRLGAAIRHASADLAGQGRKRRLLLVITDGKPNDLDHYEGRHGIEDTAMAVREARRAGQSVFGVTIDKSGKSWFPRMFGQGGFAVIPDPNRLTLA--
Q51665/446-620              -----ARNLAVSILLDVSRSTESAVTG--RAVIEIEREALAALAWGLDACGDRFAINAFSSLKRDRVFLSACKDFDEPMGAAIERRIAGLRPRFYTRLGAGIRHASAGLSAQASSRRLLLVITDGKPNDLDHYEGRHGIEDSAMAVREARRAGHAVHGITVDRDAKSWFPRIFGQGGFSLIP----------
A1B4X4/446-620              -----ARNLAVSILLDVSRSTESAVTG--RAVIEIEREALAALAWGLDACGDRFAINAFSSLKRDRVFLSACKDFDEPMGAAIERRIAGLRPRFYTRLGAGIRHASAGLSAQASSRRLLLVITDGKPNDLDHYEGRHGIEDSAMAVREARRAGHAVHGITVDRDAKSWFPRIFGQGGFSLIP----------
D0CP47/442-631              QSRPEARDLAVSILLDISRSTESAVAG--RAVIDIEREALAALAWGLNACGDDFAIHAFSSLKRQRVYVQRCKKFSEPMTATVEQRIASLRPGHYTRLGAAIRHASADLAAQARKRRLLLVITDGKPNDLDHYEGRHGIEDTCMAVREARRAGQSVFGVTIDKTGKSWFPRMFGQGGFAVIPDPNRLTMALP
A0A0N7MAX0/442-628          QSRPEARDLAVSILLDVSRSTESAVTG--RAVIDIEREALAALAWGLNACGDDFAIHAFSSLKRQRVYVQRCKRFDEPMGSTVEQRIASLRPGHYTRLGAAIRHCSADLADQSRKRRLLLVITDGKPNDLDHYEGRHGIEDTCMAVREARRAGQSVFGVTIDKTGKSWFPRMFGQGGFAVIPDPHRLTM---
A0A0X3TJS6/442-628          QSRPEARDLAVSILLDVSRSTESAVSG--RAVIDIEREALAALAWGLNACGDDFAIHAFSSLKRSRVYIQRCKGFDEPMTATVEQRIASLRPGFYTRLGAAIRHASADLASQSRKRRLLLVITDGKPNDLDHYEGRHGIEDTCMAIREARRSGQSVFGVTIDKTGKSWFPRMFGQGGFAVIPEPNRLTM---
A0A1G6UPU3/442-630          QSRPEARDLAVSILLDVSRSTESAVTG--RAVIDIEREALAALAWGLNACGDDFAIHAFSSLKRHRVYLQRCKRFDEPMGQQVEKRIASLRPGHYTRLGAAIRHVSTDLASQTRKRRLLLVITDGKPNDLDHYEGRHGIEDTRQAVREARRAGQAVFGVTIDKTGKSWFPRMFGRGGFAVIPDPNRLTMAL-
A0A0C1G8L8/442-628          QSRPEARDLAVSILLDVSRSTESAVTG--RAVIDIEREALAALAWGLNACGDDFAIHAFSSLKRQRVYVQRCKRFDEPMGAKVEQRIASLRPGHYTRLGAAIRHCSSELATQTRKRRLLLVITDGKPNDLDHYEGRHGIEDTRQAIREARRAGQSVFGVTIDKTGKSWFPRMFGQGGFAVIPDPHRLTM---
A0A1X7IG90/447-617          -----ARNLAVSILLDVSRSTESAVTG--RAVIEVEREALAALAWGLDACGDRFAINAFSSLKRDRVFLSTCKDFDEPMGVAVEQRIAGLRPRFYTRLGAGIRHASAGLARQLGSRRLLLVITDGKPNDLDHYEGRHGIEDSAMAVREARRAGHAVHGITVDRDAKSWFPRIFGPGGF--------------
A0A099F568/446-620          ----MARNLAVSILLDVSRSTESAVTG--RAVIDIEREALAALAWGLDACGDSFAINAFSSLKRDRVFLSACKSFDEPMTRAVERRIAGLRPRFYTRLGAGIRHASAGLSAQASHRRLLLIVTDGKPNDLDHYEGRHGIEDSARAVREARMRGHAVHAVTVDRDGKTWFPRIFGQGGFSLI-----------
#=GC scorecons              112127969996799969699767759009779566999676999776769939996797956946954456949777643467499967765469979967996754943734497999677997969796676775659634976966559446556969556666679699566745632213111000
#=GC scorecons_70           _____********************_*__****_*****_************_***_****_**_**____**_*****____*_***_***__******_*****__*__*___**********************___*___******__*__*___*_*___*_*******_***______________
#=GC scorecons_80           _____**_***_****_*_**__**_*__*_**___***_*_***_*___**_***__*_*__*__*_____*_****_______***_**____*****_***____*__*___*****_*_**_*_***__*_**___*___**_*____*______*_*________*_**___*______________
#=GC scorecons_90           ______*_***__***_*_**_____*__*__*___***___***_____**_***__*_*__*__*_____*_*__________***_______**_**__**____*______*_***___**_*_*_*_________*___*__*____*______*_*________*_**__________________
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