# STOCKHOLM 1.0
#=GF ID 3.40.50.10130/FF/000010
#=GF DE Crossover junction endonuclease eme1
#=GF AC 3.40.50.10130/FF/000010
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.841
#=GS F5HH93/422-643              AC F5HH93
#=GS F5HH93/422-643              OS Neurospora crassa OR74A
#=GS F5HH93/422-643              DE Uncharacterized protein
#=GS F5HH93/422-643              DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS Q5AXV2/330-454_505-561      AC Q5AXV2
#=GS Q5AXV2/330-454_505-561      OS Aspergillus nidulans FGSC A4
#=GS Q5AXV2/330-454_505-561      DE Uncharacterized protein
#=GS Q5AXV2/330-454_505-561      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A0A1U8QML2/330-454_505-561  AC A0A1U8QML2
#=GS A0A1U8QML2/330-454_505-561  OS Aspergillus nidulans FGSC A4
#=GS A0A1U8QML2/330-454_505-561  DE Uncharacterized protein
#=GS A0A1U8QML2/330-454_505-561  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A0A1D9Q196/350-571          AC A0A1D9Q196
#=GS A0A1D9Q196/350-571          OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A0A1D9Q196/350-571          DE Uncharacterized protein
#=GS A0A1D9Q196/350-571          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS F8MQV4/400-621              AC F8MQV4
#=GS F8MQV4/400-621              OS Neurospora tetrasperma FGSC 2508
#=GS F8MQV4/400-621              DE Uncharacterized protein
#=GS F8MQV4/400-621              DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS Q4WVT2/328-553              AC Q4WVT2
#=GS Q4WVT2/328-553              OS Aspergillus fumigatus Af293
#=GS Q4WVT2/328-553              DE Uncharacterized protein
#=GS Q4WVT2/328-553              DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A397HZN1/316-544          AC A0A397HZN1
#=GS A0A397HZN1/316-544          OS Aspergillus thermomutatus
#=GS A0A397HZN1/316-544          DE Uncharacterized protein
#=GS A0A397HZN1/316-544          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus thermomutatus; 
#=GS A0A0S7E0M8/323-552          AC A0A0S7E0M8
#=GS A0A0S7E0M8/323-552          OS Aspergillus lentulus
#=GS A0A0S7E0M8/323-552          DE Uncharacterized protein
#=GS A0A0S7E0M8/323-552          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus lentulus; 
#=GS A1DDK8/332-557              AC A1DDK8
#=GS A1DDK8/332-557              OS Aspergillus fischeri NRRL 181
#=GS A1DDK8/332-557              DE Uncharacterized protein
#=GS A1DDK8/332-557              DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fischeri; 
#=GS A0A0K8L4E3/343-570          AC A0A0K8L4E3
#=GS A0A0K8L4E3/343-570          OS Aspergillus udagawae
#=GS A0A0K8L4E3/343-570          DE Crossover junction endonuclease eme1
#=GS A0A0K8L4E3/343-570          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus udagawae; 
#=GS G4US13/400-621              AC G4US13
#=GS G4US13/400-621              OS Neurospora tetrasperma FGSC 2509
#=GS G4US13/400-621              DE Uncharacterized protein
#=GS G4US13/400-621              DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS A0A0B0E3R5/422-643          AC A0A0B0E3R5
#=GS A0A0B0E3R5/422-643          OS Neurospora crassa
#=GS A0A0B0E3R5/422-643          DE Uncharacterized protein
#=GS A0A0B0E3R5/422-643          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS A7EB07/350-571              AC A7EB07
#=GS A7EB07/350-571              OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A7EB07/350-571              DE Uncharacterized protein
#=GS A7EB07/350-571              DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS A0A0J5SYE8/328-553          AC A0A0J5SYE8
#=GS A0A0J5SYE8/328-553          OS Aspergillus fumigatus Z5
#=GS A0A0J5SYE8/328-553          DE Crossover junction endonuclease eme1
#=GS A0A0J5SYE8/328-553          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A229WCM0/328-553          AC A0A229WCM0
#=GS A0A229WCM0/328-553          OS Aspergillus fumigatus
#=GS A0A229WCM0/328-553          DE Uncharacterized protein
#=GS A0A229WCM0/328-553          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS B0Y1V0/328-553              AC B0Y1V0
#=GS B0Y1V0/328-553              OS Aspergillus fumigatus A1163
#=GS B0Y1V0/328-553              DE Uncharacterized protein
#=GS B0Y1V0/328-553              DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GF SQ 16
F5HH93/422-643                      EMIVDLPSSL-PPATKIQMEE-----FLKKIDVKEINTWTSPVDNVVRWRRAVKSRYNEERHHYDPIPETIETEKIILVILPAAEFAKLAMGA-------EGHNLEAHVLKVQRHFPNHQTIYLIEGLKKLLSSNRNKRNNDFASVVRSRLAE-DESASTSSS-RRTNK---KNDPPMTISESQIDAALLRLQLLYSMQIQETTCLQDTAHHLQLFTQNVAVAPYKRHQEDYLMKSAGFC
Q5AXV2/330-454_505-561              EMILDLASSFKDTSVGNQAVE-----YMRMLGVEQ-TFFDSSIRNVVKWRRKMKAIYNSSLGYWEPCELHLREEEHVLCLVTAQEFVDMVTSSLDSDNLNASSELELHILRLKRAYPHCTVIYLIEGLSAW--------------------------------------------------DDTIEDALLNLQVNHNCLIHQTTAPPESAEWIKIFTEHISTVPYRRERMN--DNDSAFC
A0A1U8QML2/330-454_505-561          EMILDLASSFKDTSVGNQAVE-----YMRMLGVEQ-TFFDSSIRNVVKWRRKMKAIYNSSLGYWEPCELHLREEEHVLCLVTAQEFVDMVTSSLDSDNLNASSELELHILRLKRAYPHCTVIYLIEGLSAW--------------------------------------------------DDTIEDALLNLQVNHNCLIHQTTAPPESAEWIKIFTEHISTVPYRRERMN--DNDSAFC
A0A1D9Q196/350-571                  EMIVDLPSCIQDKS--NMALRARIDILLKELNVQQ-SQWENS-DLVIKWRRKVISEYNEESDIWEPKAQQIKNEKHILCILSAKKFVDMSLGR-------GDMDLETHVSILKSHFESCNVLYLIEGLTAWQNKNRNIKDRQYKAAVRSRIPE-DEAAGASSSQRRKVP---QADEYIENADSAIEDSLLNLEVLHKVKYWLTSNAQDSAKWVSQFTKHISTIPYLAQREALGLN---FC
F8MQV4/400-621                      EMIVDLPSSL-PPATKIQIEE-----FLKKIDVKEINTWTSPVDNVVRWRRAVKSRYNEERHHYDPIPETIETEKIILVILPAAEFAKLAMGA-------EGHNLEAHVLKVQRHFPNHQTIYLIEGLKKLLSSNRNKRNNDFASVVRSRLAE-DESASTASS-RRTNK---KNDPPMTISESQIDAALLRLQLLYSMQIQETTCLQDTAHQLQLFTQNVAVAPYKRHQENYLMKSAGFC
Q4WVT2/328-553                      EMILDLASSFRETSVGNQSIE-----LMKRLGVEH-TFFTSSIPNLVKWRRKVTARYNEAAGHWEPCPHHIREEDHVLCLVTAQEFVNMAIAP--ADPVTGTTELELHLSHIKKAYPRHKLIYLIEGLTSWMRKNQNSRNRAFQAQVRQQL----VPDDPSSSTRRRKAPAKTAESTPPVDDDTIEDALLELQVTHACLIHHTSAASESAEWIKNFTEHISTIPYKRERMD--GNDSAFC
A0A397HZN1/316-544                  EMILDLASSFRETSIGNQSIE-----LMKRLGVEH-TFFTSSIPNIVKWRRKVTARYNEAAGHWEPCPHHIREEEHVLCLVTAQDFVDMVIAA--ADPVTGTTKLELHLDRIKKAYPGHRPIYLIEGLTAWMRKNQNSRNRAFQAQVRRQLDQ-QNPDDSSSSARRRKPPAKTAESTPPVDDDTIEDALLELQVTHACLIHHTSAAPESAEWIKNFTEHISTIPYKRERMD--GNDSAFC
A0A0S7E0M8/323-552                  EMILDLASSLRETSVGNQSIE-----LMKRLGVEH-TFFTSSIPNIVKWRRKVTAKYNEAAGHWEPCLHHIREEDHVLCLVTAQEFVNMVIAP--ADPVTGISELELHLDRIKKAYPRHKPIYLIEGLAAWMRKNQNSRNRAFQAQVRQQLDQNQNPDDPSSSTRRRKPPAKTAESTRPVDDDTIEDALLELQVTHACLIHHTSAAAESAEWIKNFTEHISTIPYKRERMD--SNDSAFC
A1DDK8/332-557                      EMILDLASSFRETSVGNQSIE-----LMKRLGVEH-TFFTSSIPNIVKWRRKVTARYNEAAGHWEPCPHHIRDEDHVLCLVTAQEFVNMAIAP--ADPVTGTTELELHLSRIKNAYPRHKLIYLIEGLTAWMRKNQNSRNRAFQAQVRRQL----VPDDPSSSTRRRNPPAKTAESTPPVDDDTIEDALLELQVTHACLIHHTSAAAESAEWIKNFTEHISTIPYKRERMD--GNDSAFC
A0A0K8L4E3/343-570                  EMILDLASSFRETSVGNQSIE-----LMKRLGVEH-TFFTSSIPNVVKWRRKVTARYNEAAGHWEPCPHHIREEDHVLCLVTAQDFVNMVIAP--ADPVTGTTELELHLDRIKKVYPRHKPIYLIEGLTAWMRKNQNSRNRAFQAQVRRQLD--QNPDDPSSSTHRRKPPAKTAESTPPVDDDTIEDALLELQVTHACLIHHTSAAAESAEWIKNFTEHISTIPYKRERMD--GNDSAFC
G4US13/400-621                      EMIVDLPSSL-PPATKIQIEE-----FLKKIDVKEINTWTSPVDNVVRWRRAVKSRYNEERHHYDPIPETIETEKIILVILPAAEFAKLAMGA-------EGHNLEAHVLKVQRHFPNHQTIYLIEGLKKLLSSNRNKRNNDFASVVRSRLAE-DESASTASS-RRTNK---KNDPPMTISESQIDAALLRLQLLYSMQIQETTCLQDTAHQLQLFTQNVAVAPYKRHQENYLMKSAGFC
A0A0B0E3R5/422-643                  EMIVDLPSSL-PPATKIQMEE-----FLKKIDVKEINTWTSPVDNVVRWRRAVKSRYNEERHHYDPIPETIETEKIILVILPAAEFAKLAMGA-------EGHNLEAHVLKVQRHFPNHQTIYLIEGLKKLLSSNRNKRNNDFASVVRSRLAE-DESASTSSS-RRTNK---KNDPPMTISESQIDAALLRLQLLYSMQIQETTCLQDTAHHLQLFTQNVAVAPYKRHQEDYLMKSAGFC
A7EB07/350-571                      EMIVDLPSCIQDKS--NMALRARIDILLKELNVQQ-SQWENS-DLVIKWRRKVISEYNEESDIWEPKAQQIKNEKHILCILSAKKFVDMSLGR-------GDMDLETHVSILKSHFESCNVLYLIEGLTAWQNKNRNIKDRQYKAAVRSRIPE-DEAAGASSSQRRKVP---QADEYIENADSAIEDSLLNLEVLHKVKYWLTSNAQDSAKWVSQFTKHISTIPYLAQREALGLN---FC
A0A0J5SYE8/328-553                  EMILDLASSFRETSVGNQSIE-----LMKRLGVEH-TFFTSSIPNLVKWRRKVTARYNEAAGHWEPCPHHIREEDHVLCLVTAQEFVNMAIAP--ADPVTGTTELELHLSHIKKAYPRHKLIYLIEGLTSWMRKNQNSRNRAFQAQVRQQL----VPDDPSSSTRRRKPPAKTAESTPPVDDDTIEDALLELQVTHACLIHHTSAASESAEWIKNFTEHISTIPYKRERMD--GNDSAFC
A0A229WCM0/328-553                  EMILDLASSFRETSVGNQSIE-----LMKRLGVEH-TFFTSSIPNLVKWRRKVTARYNEAAGHWEPCPHHIREEDHVLCLVTAQEFVNMAIAP--ADPVTGTTELELHLSHIKKAYPRHKLIYLIEGLTSWMRKNQNSRNRAFQAQVRQQL----VPDDPSSSTRRRKPPAKTAESTPPVDDDTIEDALLELQVTHACLIHHTSAASESAEWIKNFTEHISTIPYKRERMD--GNDSAFC
B0Y1V0/328-553                      EMILDLASSFRETSVGNQSIE-----LMKRLGVEH-TFFTSSIPNLVKWRRKVTARYNEAAGHWEPCPHHIREEDHVLCLVTAQEFVNMAIAP--ADPVTGTTELELHLSHIKKAYPRHKLIYLIEGLTSWMRKNQNSRNRAFQAQVRQQL----VPDDPSSSTRRRKPPAKTAESTPPVDDDTIEDALLELQVTHACLIHHTSAASESAEWIKNFTEHISTIPYKRERMD--GNDSAFC
#=GC scorecons                      999699697524564356447000005674659550545576446677999674659974345679454575495579566595696575554001211154459949644565476464479999994453336462554353426634512023333356615633311134433233375597679949764744465496454769556539956766599575645103644499
#=GC scorecons_70                   ******_**____*___*__*______**_*_*_______**__*******_*___***____***____*__*__**_**_*_***_*_______________**_*____*__**____*******_____________________________________________________*__**_***_***_*___*__*____***_____**_****_**_*_*_____*___**
#=GC scorecons_80                   ***_**_**___________*_______*___*_______*_____*****_*___**______**____*__*___*____*__*__________________**_*_______*_____*******_____________________________________________________*__**_***_**__*______*______*_____**__*___**_____________**
#=GC scorecons_90                   ***_**_*________________________*_______________***_____**_______*_______*___*____*__*__________________**_*______________******________________________________________________________*___**_*__________*______*_____**______**_____________**
//