# STOCKHOLM 1.0
#=GF ID 3.40.50.1000/FF/000284
#=GF DE Nuclear LIM interactor-interacting factor 1
#=GF AC 3.40.50.1000/FF/000284
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 72.075
#=GS Q38EW0/35-202_246-276  AC Q38EW0
#=GS Q38EW0/35-202_246-276  OS Trypanosoma brucei brucei TREU927
#=GS Q38EW0/35-202_246-276  DE Uncharacterized protein
#=GS Q38EW0/35-202_246-276  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q38EW0/35-202_246-276  DR GO; GO:0004724; GO:0005739; GO:0005829; GO:0006470; GO:0020015; 
#=GS Q38EV9/35-202_246-276  AC Q38EV9
#=GS Q38EV9/35-202_246-276  OS Trypanosoma brucei brucei TREU927
#=GS Q38EV9/35-202_246-276  DE Uncharacterized protein
#=GS Q38EV9/35-202_246-276  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q38EV9/35-202_246-276  DR GO; GO:0004724; GO:0005739; GO:0006470; GO:0020015; 
#=GS Q4Q377/32-237          AC Q4Q377
#=GS Q4Q377/32-237          OS Leishmania major
#=GS Q4Q377/32-237          DE Putative NLI-interacting factor
#=GS Q4Q377/32-237          DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q377/32-237          DR GO; GO:0004724; GO:0005829; GO:0006470; 
#=GS A8B9T6/93-274          AC A8B9T6
#=GS A8B9T6/93-274          OS Giardia lamblia ATCC 50803
#=GS A8B9T6/93-274          DE Nuclear LIM interactor-interacting factor 1
#=GS A8B9T6/93-274          DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS E9BQT7/32-237          AC E9BQT7
#=GS E9BQT7/32-237          OS Leishmania donovani BPK282A1
#=GS E9BQT7/32-237          DE NLI-interacting factor, putative
#=GS E9BQT7/32-237          DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9B4U9/30-237          AC E9B4U9
#=GS E9B4U9/30-237          OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9B4U9/30-237          DE Putative NLI-interacting factor
#=GS E9B4U9/30-237          DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A4I9T8/32-237          AC A4I9T8
#=GS A4I9T8/32-237          OS Leishmania infantum
#=GS A4I9T8/32-237          DE PTP1-interacting_protein_-_39_kDa_-_putative
#=GS A4I9T8/32-237          DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS V6TKD6/93-274          AC V6TKD6
#=GS V6TKD6/93-274          OS Giardia intestinalis
#=GS V6TKD6/93-274          DE NLI interacting factor-like phosphatase
#=GS V6TKD6/93-274          DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS E1F8A2/93-274          AC E1F8A2
#=GS E1F8A2/93-274          OS Giardia lamblia P15
#=GS E1F8A2/93-274          DE Nuclear LIM interactor-interacting factor 1
#=GS E1F8A2/93-274          DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A0A3S7X7S3/32-237      AC A0A3S7X7S3
#=GS A0A3S7X7S3/32-237      OS Leishmania donovani
#=GS A0A3S7X7S3/32-237      DE PTP1-interacting protein, 39 kDa, putative
#=GS A0A3S7X7S3/32-237      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GF SQ 10
Q38EW0/35-202_246-276          -------WSLPLPPQQPRDTGKPTLVLDIDETLIHT--------VGMRNEGSDS-----------VSFSFFLRPHAKEFLAEVRELYEVVFWTAGTASYCSAVMDALEVQVLQLPRSFYNIDELRVEA-RGGISTKNVNFYALSRTQTLQGHNYMKYLPMLGRPLNRVIVIDSDVRSFPLHPRNGVKIEPFLPNEADHALMDLIPMLRSAASSTDLTHELDHWRTD
Q38EV9/35-202_246-276          -------WSLPLPPQQPRDTGKPTLVLDIDETLIHT--------VGMRNEGSDS-----------VSFSFFLRPHAKEFLAEVRELYEVVFWTAGTASYCSAVMDALEVQVLQLPRSFYNIDELRVEA-RGGISTKNVNFYALSRTQTLQGHNYMKYLPMLGRPLNRVIMVDDNVRSFPLHPRNGVKIEPFLPNEADHALMDLIPMLRSAASSTDLTHELDHWRTD
Q4Q377/32-237                  ----DPHWPLPLPPPLPMNKQKHTLVLDIDETLIHTYA------MGLHDDSKDHTRDPALQGVSLIDYNVLLRPHLKEFLEEVNQLFEVVFWTAGTASYCCAVLDALEQQVMQLPRSFYSYVELAKESRKMKSSTSHTNFYALSRTQTLEQQGYMKYLPMLGRKMSSVVMLDDNVRSFPLTPRNGIRIDAFDPD--DHVLQRYIFALRRVQKEK--PHEM------
A8B9T6/93-274                  GGHVDQSDHLALLPPNVRKKGRPTLVLDLDATLFYTSAELLNTPLDYFDMGEES-----------TYRYLYLRPYALDFLGWASTVFEVIIWTAAMESYA-------EPRIRATEIDRYADVVLYRGACDMIDGS------------------LVKNLAKLGRPLSDMIIVDDNPVSYALNVELAYPIPPFSGEEDDLELLRLVPILRKVLELSSLKR--------
E9BQT7/32-237                  ----DPHWPLPLPPPLPMNKQKHTLVLDIDETLIHTYA------MGLHDDSKDRTRDPALQGVSLIDYNVLLRPHLKEFLEEVNQLFEVVFWTAGTASYCCAVLDALEQQVMQLPRSFYSHVELAKESHKMKSSTSHTNFYALSRTQTLEQQGYMKYLPMLGRKMSSVVMLDDNVRSFPLTPRNGIRIDAFDPD--DRVLQRYMFALRRVQEEK--PHEM------
E9B4U9/30-237                  --EFEPHWPLPLPPPLPMHKRKHTLVLDIDETLIHTYA------MSLHDSSKDKTRDPALQGVSLIDYNVLLRPHLKEFLEEVNQLFEVVFWTAGTASYCCAVLDALEQQVMQLPRSFYSHVELAKESHKMKSSTSHTNFYALSRTQTLEQQGYMKYLPMLGRKMSSVVMLDDNVRSFPLTPRNGIRIDPFDPD--DRVLQRYMFALRRVQEEK--PHEM------
A4I9T8/32-237                  ----DPHWPLPLPPPLPMNKQKHTLVLDIDETLIHTYA------MGLHDDSKDRTRDPALQGVSLIDYNVLLRPHLKEFLEEVNQLFEVVFWTAGTASYCCAVLDALEQQVMQLPRSFYSHVELAKESHKMKSSTSHTNFYALSRTQTLEQQGYMKYLPMLGRKISSVVMLDDNVRSFPLTPRNGIRIDAFDPD--DRVLQRYMFALRRVQEEK--PHEM------
V6TKD6/93-274                  GGHVDQSDHLALLPPNDRKKGRPTLVLDLDATLFYTSAELLNTPLDYFDMGEES-----------TYRYLYLRPYALDFLGWASTVFEVIIWTAAMESYA-------EPRIRATEIDRYADVVLYRGACDMIDGS------------------LVKNLAKLGRPLSDMIIVDDNPVSYALNVELAYPIPPFSGEEDDLELLRLVPILRKVLELSSLKR--------
E1F8A2/93-274                  GGHIDQSDHVVLPPPNAHKKGRPTLVLDLDATLFYTSAELLNTPLDYFDIGEES-----------AYRYLYLRPYALDFLAWASTVFEVIVWTAALESYA-------EPRIRITEIDRYADVVLYRSACDMINGS------------------LVKNLAKLGRPLSDMIIVDDNPVSYALNVELAYPIPPFNGEEDDLELLRLVPILRKVLELSSLKR--------
A0A3S7X7S3/32-237              ----DPHWPLPLPPPLPMNKQKHTLVLDIDETLIHTYA------MGLHDDSKDRTRDPALQGVSLIDYNVLLRPHLKEFLEEVNQLFEVVFWTAGTASYCCAVLDALEQQVMQLPRSFYSHVELAKESHKMKSSTSHTNFYALSRTQTLEQQGYMKYLPMLGRKMSSVVMLDDNVRSFPLTPRNGIRIDAFDPD--DRVLQRYMFALRRVQEEK--PHEM------
#=GC scorecons                 0010433447596963444657599999695995793500000055447364751111111111144445599975479944644679975999655995233233394674455454943659345625633661223333333333321225695965999566467659775497694554644946935521944946555499564534124632000000
#=GC scorecons_70              _________*_****____*_*_*******_**_**____________*___*__________________****__***_____*****_***___**________*_**_______*____*______________________________**_*__***_**_**__***__**_*_______*_**_____*__*_*____**_*_______*________
#=GC scorecons_80              _________*_*_*_________*****_*_**__*___________________________________***____**______***__***___**________*__________*____*_______________________________*_*__***________***__**_*_______*__*_____*__*______**__________________
#=GC scorecons_90              ___________*_*_________*****_*_**__*___________________________________***____**_______**__***___**________*__________*____*_______________________________*_*__***________*____*__*_______*__*_____*__*______**__________________
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