# STOCKHOLM 1.0
#=GF ID 3.40.220.20/FF/000002
#=GF DE Polyprotein ORF1ab
#=GF AC 3.40.220.20/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 1.961
#=GS K9N7C7/1280-1402      AC K9N7C7
#=GS K9N7C7/1280-1402      OS Betacoronavirus England 1
#=GS K9N7C7/1280-1402      DE Replicase polyprotein 1ab
#=GS K9N7C7/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS K9N7C7/1280-1402      DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS K9N638/1280-1402      AC K9N638
#=GS K9N638/1280-1402      OS Betacoronavirus England 1
#=GS K9N638/1280-1402      DE Replicase polyprotein 1a
#=GS K9N638/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS K9N638/1280-1402      DR EC; 3.4.19.12; 3.4.22.69; 
#=GS M1RUQ1/1280-1402      AC M1RUQ1
#=GS M1RUQ1/1280-1402      OS Human betacoronavirus 2c England-Qatar/2012
#=GS M1RUQ1/1280-1402      DE ORF1a
#=GS M1RUQ1/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS M1RUQ1/1280-1402      DR EC; 3.4.19.12; 3.4.22.69; 
#=GS M4STU1/1280-1402      AC M4STU1
#=GS M4STU1/1280-1402      OS Human betacoronavirus 2c Jordan-N3/2012
#=GS M4STU1/1280-1402      DE ORF1ab protein
#=GS M4STU1/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS K0BWD0/1280-1402      AC K0BWD0
#=GS K0BWD0/1280-1402      OS Human betacoronavirus 2c EMC/2012
#=GS K0BWD0/1280-1402      DE ORF1ab
#=GS K0BWD0/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS A0A0U2GPI9/1280-1402  AC A0A0U2GPI9
#=GS A0A0U2GPI9/1280-1402  OS Middle East respiratory syndrome-related coronavirus
#=GS A0A0U2GPI9/1280-1402  DE Polyprotein ORF1ab
#=GS A0A0U2GPI9/1280-1402  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS K4LC41/1280-1402      AC K4LC41
#=GS K4LC41/1280-1402      OS Human betacoronavirus 2c EMC/2012
#=GS K4LC41/1280-1402      DE ORF1a
#=GS K4LC41/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS V9TU12/1280-1402      AC V9TU12
#=GS V9TU12/1280-1402      OS Middle East respiratory syndrome-related coronavirus
#=GS V9TU12/1280-1402      DE Orf1a
#=GS V9TU12/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS V9TU05/1280-1402      AC V9TU05
#=GS V9TU05/1280-1402      OS Middle East respiratory syndrome-related coronavirus
#=GS V9TU05/1280-1402      DE Orf1a
#=GS V9TU05/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS W6A0I8/646-768        AC W6A0I8
#=GS W6A0I8/646-768        OS Middle East respiratory syndrome-related coronavirus
#=GS W6A0I8/646-768        DE ORF1a
#=GS W6A0I8/646-768        DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS W6A941/1280-1402      AC W6A941
#=GS W6A941/1280-1402      OS Middle East respiratory syndrome-related coronavirus
#=GS W6A941/1280-1402      DE ORF1a
#=GS W6A941/1280-1402      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS W6A040/646-768        AC W6A040
#=GS W6A040/646-768        OS Middle East respiratory syndrome-related coronavirus
#=GS W6A040/646-768        DE ORF1a
#=GS W6A040/646-768        DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS A0A2D0YGC2/1280-1402  AC A0A2D0YGC2
#=GS A0A2D0YGC2/1280-1402  OS Middle East respiratory syndrome-related coronavirus
#=GS A0A2D0YGC2/1280-1402  DE 1AB polyprotein
#=GS A0A2D0YGC2/1280-1402  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GF SQ 13
K9N7C7/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
K9N638/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
M1RUQ1/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
M4STU1/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLMQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
K0BWD0/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLMQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
A0A0U2GPI9/1280-1402          LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
K4LC41/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLMQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
V9TU12/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQHANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
V9TU05/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQHANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
W6A0I8/646-768                LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
W6A941/1280-1402              LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
W6A040/646-768                LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
A0A2D0YGC2/1280-1402          LTFSYDGLRGAIRKAKDYGFTVFVCTDNSANTKVLRNKGVDYTKKFLTVDGVQYYCYTSKDTLDDILQQANKSVGIISMPLGYVSHGLDLIQAGSVVRRVNVPYVCLLANKEQEAILMSEDVK
#=GC scorecons                999999999999999999999999999999999999999999999999999999999999999999997999999999999999999999699999999999999999999999999999999
#=GC scorecons_70             ***************************************************************************************************************************
#=GC scorecons_80             ********************************************************************_*********************_********************************
#=GC scorecons_90             ********************************************************************_*********************_********************************
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