# STOCKHOLM 1.0
#=GF ID 3.40.220.10/FF/000025
#=GF DE Polyprotein 1a
#=GF AC 3.40.220.10/FF/000025
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 8.343
#=GS P0C6Y4/1282-1453      AC P0C6Y4
#=GS P0C6Y4/1282-1453      OS Porcine epidemic diarrhea virus CV777
#=GS P0C6Y4/1282-1453      DE Replicase polyprotein 1ab
#=GS P0C6Y4/1282-1453      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS P0C6Y4/1282-1453      DR EC; 2.7.7.48; 3.4.19.12; 3.6.4.12; 3.6.4.13; 
#=GS P0C6V6/1282-1453      AC P0C6V6
#=GS P0C6V6/1282-1453      OS Porcine epidemic diarrhea virus CV777
#=GS P0C6V6/1282-1453      DE Replicase polyprotein 1a
#=GS P0C6V6/1282-1453      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS P0C6V6/1282-1453      DR EC; 3.4.19.12; 
#=GS R4JK63/1284-1453      AC R4JK63
#=GS R4JK63/1284-1453      OS Porcine epidemic diarrhea virus
#=GS R4JK63/1284-1453      DE Polyprotein
#=GS R4JK63/1284-1453      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS K4L9I6/1283-1453      AC K4L9I6
#=GS K4L9I6/1283-1453      OS Porcine epidemic diarrhea virus
#=GS K4L9I6/1283-1453      DE Polyprotein 1ab
#=GS K4L9I6/1283-1453      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS A0A067YRM0/1275-1445  AC A0A067YRM0
#=GS A0A067YRM0/1275-1445  OS Porcine epidemic diarrhea virus
#=GS A0A067YRM0/1275-1445  DE Polyprotein
#=GS A0A067YRM0/1275-1445  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS A0A1C9C4H2/1275-1445  AC A0A1C9C4H2
#=GS A0A1C9C4H2/1275-1445  OS Porcine epidemic diarrhea virus
#=GS A0A1C9C4H2/1275-1445  DE Polyprotein
#=GS A0A1C9C4H2/1275-1445  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS A0A059VJE6/1283-1453  AC A0A059VJE6
#=GS A0A059VJE6/1283-1453  OS Porcine epidemic diarrhea virus
#=GS A0A059VJE6/1283-1453  DE Polyprotein
#=GS A0A059VJE6/1283-1453  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS U6BPB2/1283-1453      AC U6BPB2
#=GS U6BPB2/1283-1453      OS Porcine epidemic diarrhea virus
#=GS U6BPB2/1283-1453      DE Polyprotein 1a
#=GS U6BPB2/1283-1453      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS A0A0N7EI25/388-558    AC A0A0N7EI25
#=GS A0A0N7EI25/388-558    OS Porcine epidemic diarrhea virus
#=GS A0A0N7EI25/388-558    DE Non-structural protein 3
#=GS A0A0N7EI25/388-558    DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GF SQ 9
P0C6Y4/1282-1453              VDSVVEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANEKLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYGDKEREAIIKYMDGLV
P0C6V6/1282-1453              VDSVVEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANEKLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYGDKEREAIIKYMDGLV
R4JK63/1284-1453              --PVLDPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLDALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREATINYMDGLV
K4L9I6/1283-1453              -EPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGSIKVGRGVMLDALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLV
A0A067YRM0/1275-1445          -EPVLEPVVKPFYSYKNVDFYQGDFNDLVRLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLV
A0A1C9C4H2/1275-1445          -EPVLEPVVKPFYSYKNVDFYQGDFNDLVRLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLV
A0A059VJE6/1283-1453          -EPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLV
U6BPB2/1283-1453              -EPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLV
A0A0N7EI25/388-558            -EPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLV
#=GC scorecons                0469679999999999999999999799979999999999996999999999999999999999999999999979999999997999999999999999999999999999999999999999999999999999999999999999999999996999999796999999
#=GC scorecons_70             ___***************************************_*****************************************************************************************************************_********_******
#=GC scorecons_80             ___*_********************_****************_*****************************************************************************************************************_********_******
#=GC scorecons_90             ___*__*******************_***_************_*******************************_*********_***********************************************************************_******_*_******
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