# STOCKHOLM 1.0 #=GF ID 3.40.190.10/FF/000251 #=GF DE Peptide ABC transporter substrate-binding protein #=GF AC 3.40.190.10/FF/000251 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 83.106 #=GS Q5LPN4/15-280 AC Q5LPN4 #=GS Q5LPN4/15-280 OS Ruegeria pomeroyi DSS-3 #=GS Q5LPN4/15-280 DE Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein #=GS Q5LPN4/15-280 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria pomeroyi; #=GS Q5LPN4/15-280 DR GO; GO:0006857; GO:0015675; GO:0016151; GO:0042277; GO:0042626; #=GS A9WGA3/26-308 AC A9WGA3 #=GS A9WGA3/26-308 OS Chloroflexus aurantiacus J-10-fl #=GS A9WGA3/26-308 DE Extracellular solute-binding protein family 5 #=GS A9WGA3/26-308 DR ORG; Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus; Chloroflexus aurantiacus; #=GS A9WGA8/36-315 AC A9WGA8 #=GS A9WGA8/36-315 OS Chloroflexus aurantiacus J-10-fl #=GS A9WGA8/36-315 DE Extracellular solute-binding protein family 5 #=GS A9WGA8/36-315 DR ORG; Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus; Chloroflexus aurantiacus; #=GS Q89EY3/57-334 AC Q89EY3 #=GS Q89EY3/57-334 OS Bradyrhizobium diazoefficiens USDA 110 #=GS Q89EY3/57-334 DE Blr6918 protein #=GS Q89EY3/57-334 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS Q89UQ8/73-329 AC Q89UQ8 #=GS Q89UQ8/73-329 OS Bradyrhizobium diazoefficiens USDA 110 #=GS Q89UQ8/73-329 DE ABC transporter peptide-binding protein #=GS Q89UQ8/73-329 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS P73732/32-286 AC P73732 #=GS P73732/32-286 OS Synechocystis sp. PCC 6803 substr. Kazusa #=GS P73732/32-286 DE Extracellular solute-binding protein #=GS P73732/32-286 DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; #=GS A0A1I5NRG8/39-309 AC A0A1I5NRG8 #=GS A0A1I5NRG8/39-309 OS Bradyrhizobium sp. Ghvi #=GS A0A1I5NRG8/39-309 DE Peptide/nickel transport system substrate-binding protein #=GS A0A1I5NRG8/39-309 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. Ghvi; #=GS A0A0R3E2D4/38-310 AC A0A0R3E2D4 #=GS A0A0R3E2D4/38-310 OS Bradyrhizobium manausense #=GS A0A0R3E2D4/38-310 DE Peptide ABC transporter substrate-binding protein #=GS A0A0R3E2D4/38-310 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium manausense; #=GS I0G1E7/40-310 AC I0G1E7 #=GS I0G1E7/40-310 OS Bradyrhizobium sp. S23321 #=GS I0G1E7/40-310 DE Substrate-binding protein #=GS I0G1E7/40-310 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. S23321; #=GS J2W962/36-316 AC J2W962 #=GS J2W962/36-316 OS Bradyrhizobium sp. YR681 #=GS J2W962/36-316 DE ABC-type dipeptide transport system, periplasmic component #=GS J2W962/36-316 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. YR681; #=GS A0A2M8RA44/47-302 AC A0A2M8RA44 #=GS A0A2M8RA44/47-302 OS Bradyrhizobium sp. INPA54B #=GS A0A2M8RA44/47-302 DE Peptide ABC transporter substrate-binding protein #=GS A0A2M8RA44/47-302 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. INPA54B; #=GS A0A0E3VT33/49-327 AC A0A0E3VT33 #=GS A0A0E3VT33/49-327 OS Bradyrhizobium diazoefficiens #=GS A0A0E3VT33/49-327 DE Substrate-binding protein #=GS A0A0E3VT33/49-327 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS A0A2A6N4T9/57-334 AC A0A2A6N4T9 #=GS A0A2A6N4T9/57-334 OS Bradyrhizobium diazoefficiens #=GS A0A2A6N4T9/57-334 DE Peptide ABC transporter substrate-binding protein #=GS A0A2A6N4T9/57-334 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS A0A0E4FUB0/49-304 AC A0A0E4FUB0 #=GS A0A0E4FUB0/49-304 OS Bradyrhizobium diazoefficiens #=GS A0A0E4FUB0/49-304 DE ABC transporter peptide-binding protein #=GS A0A0E4FUB0/49-304 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GF SQ 14 Q5LPN4/15-280 -----------------MGAIASAALAPAA-----FAERGSDGNVSIIYWQAPSILNPFLSGGTKDVESASLVIEPLARYDENGGMVPFLATEIPTVENGGVSADLTSITWKIAPGIKWSDGSAFTAHDVKFTADYCMHPEGGCAQLTKFEGVTSVEALDDMTVKVTFDKPTPFPYGPFVGGESPIIQKAQFENCMGAKAPEC---TTENFGPIGTGPFVVTEFKPNDVITMKANDNYRDPAKPAFATLTFKGGGDATAAGRAVMETGEFDYAWNLQLAPEVIQQMQAGGK--------- A9WGA3/26-308 APAAQATATPQPTAAPQPTAAPAATTAPAP-TEAPTAAPQQGGKLTILYWQAVTTLNPHLATGTKDFDGATVILEPLARYNEKDELVPFLAAEIPTLENGGVAADGSSVTWKIKPGLKWSDGSDFTIDDIIFTWQYCADEATACTTKAAFDPIANIEKIDDTTFRIIWKEPNANPYISFVGPLGMILQKKQFENCIGAAASTSAECQAANLAPIGTNAWKLKEFRPGDTVIYERNPFYRDAANVFFDEVEIKGGGDATSAARAVCETAEVDFAWNLQIPKAVLE---------------- A9WGA8/36-315 ---AQETVTAGPTVAPQPTAVPEATAVPAS-TAVPTAIPPSGGKLTILSWQAITTLNPHLATGVKDFNGATVILEPLARYNERDELVPFLAAEIPTLANGGIAADGTSITWKIKPGLKWSDGSDFTIDDIIFTWRYCVDEATGCTNKTSFDPIADITPIDDTTFTITWKEPNPNPYIAFVGSAGMILQQKQFANCIGAAANTSAECQAANLAPIGTNAWKVKEFRPGDTVIYERNPFYRDADNVFFDEVEIKGGGDAASAARAVCTTGEADFALNMQVPKAVLE---------------- Q89EY3/57-334 ----------SQILLWNDVAMADATLPYKP------TKAGGGGPLKILIWQAPTLLNPHFALGTKDQVASRIFFEPLAGWDREGNLIPCLAAEVPTKANGGLSPDGTSVTWKLKQGVRWHDGKPFTADDVVFTWQYAADLATAAYTTGSYQNIK-VEKIDDHTVKVIFKAPTPFWADPFVGAVGQILPKHHFGDYAGAKSRDA----PGNLKPVGTGPYKFVEFKPGDLILAERNPDYHVKNQPYFDTLEVKGGGDAVSAARAVLQTGEYDYAWNLLVEDEVLKRMEASGKGKVEFTLS- Q89UQ8/73-329 ------------------VAMAEGVSTYKP------TKRGGGGALKLLWWQGPTLLNPHFATGTKDQDGSRLFYEPLACWDPDGNMKLVLAAEIPSIQNGGLAADGKSVTWKLKPGVKWHDGKPFTADDVVFNWEYAKDPATSAVTIATYRDIV-VEKVDDLTVRILFNKPTPFWADAFVGAPNTIIPKHLFADYKGAKSREA----PNNLSPVGTGPYKFLEFKPGDLVRGELNPDYHMPNRPYFDTLEMKGGGDAVSAARAVIQTGEYDFGYNIQVEDDVLLRL-------------- P73732/32-286 -----------------------------PNVGNGNSQQNGQETLKILSWQAPTILNPHLATGFKDAEASRIALEPLASFDQEGNLVPFLAAEIPSVENGGVAADGLSVTWKLKPDVLWSDGQPFSAEDVAFTYKFLSDPKTGATSTGTYEAIAKVEALDKNTVKITFKEPNPAWFLPFVGSEGMILPQHIYKDFVGEKARQA----PANLLPIGTGPYRVTSFKPGDVVLYEVNPHYRDRKNIGFQQVEIKGGGDATSAARAVLQTGDADFALNLQVEDNILQSLAQ------------ A0A1I5NRG8/39-309 -----------QILLWNDVAMADATLAYKP------TKAGGGGPLKMLVWQAPTLLNPHFALGTKDQVASRVFFEPLAGWDRDGNLIPCLAAEVPTKASGGLSADGTSVIWKLKQGVKWHDGKPFTADDVVFTWAYAADLATAAYTTGSYQNIT-VEKIDDHTVKVVFKAPTPFWADPFVGAIGQILPKHHFADYVGAKSRDA----PGNLKPVGTGPYKFVEFKPGDLVRAERNPDYHVKNQPYFDTFEIKGGGDAVSAARAVLQTGEYDYAWNLLVEDEILKRMEAGGKGK------- A0A0R3E2D4/38-310 ----------SQILLWNDVAMANATLAYKP------TKAGGGGPLRMLVWQAPTLLNPHFALGTKDQVASRIFFEPLAGWDKEGNLIPCLAAEIPTKANGGLSADGTCVIWKLKQGVRWHDGKPFTADDVVFTWTYAADLATAAYTTGSYKDII-VEKIDDHTIKVIFKAPTPFWADPFVGSVGQILPKHHFGDYAGAKSRDA----PGNLKPVGTGPYKFVEFKPGDLLRAERNPDYHVKNQPYFDTFDIKGGGDAVSAARAVLQTGEYDYAWNLLVEDEILKRMETGGKGKV------ I0G1E7/40-310 ------------ILLWNDVAMADATLEYKP------TKAGGGGPLKLLVWQAPTLLNPHFAVGTKDQIASRIFFEPLAGWDKEGNLFPCLAAEVPTKANGGLAADGTSVTWKLKQGVRWHDGKPFTADDVVFTWTYASDLATAAYTTGSYKDIK-VEKIDDHTVKVIFKDPTPFWADPFVGSVGPILPKHHFGEYAGAKSRDA----PGNLKPVGTGPYRFVEFKPGDMIKAERNPDYHVKNQPHFDTLEVKGGGDAVSAARAVLQTGEYDFAWNLLVEDEVLKRMETSGKGRI------ J2W962/36-316 --------IASQILSWNDVAMADATLAYKP------TKAGGGGPLKMLVWQAPTLLNPHFALGTKDQVASRIFFEPLAGWDKEGNLIPCLAAEVPTKANGGLSPDGTSVTWKLKQGVRWHDGKPFTADDVVFTWAYAADLATAAYTTGSYQNIK-VEKIDDHTVKVIFKAPTPFWADPFVGSVGQILPKHQFGDYTGAKSRDA----PGNLKPIGTGPYKFVEFKPGDLILAERNPDYHVKNQPYFDTLEVKGGGDAVSAARAVLQTGEYDYAWNLLVEDEVLKRMEASGKGKVEFTLSG A0A2M8RA44/47-302 -------------------AMAEGPSAYKP------TKRGGGGALKLLWWQGPTLLNPHFATGTKDQDGSCLFYEPLACWDPDGNMKLVLAAEIPSIQNGLLAADGKSVTWKLKPGVKGHDGKPFTADDVVFTWEYIVDPATAAITVATYRDIT-VAKVDDLTVRITFKKPTPFWADAFVGAPNTIIPKHLFADYKGSKSREA----PTNLAPVGTGPYKFVEFKPGDLVRGQLNPDYHMPNRPYFDSVEMKGGGDAVSAARAVIQTGEYDFGWNIQVEDDVLLRL-------------- A0A0E3VT33/49-327 ---------ASQILLWNDVAMADATLPYKP------TKAGGGGPLKILIWQAPTLLNPHFALGTKDQVASRIFFEPLAGWDREGNLIPCLAAEVPTKANGGLSPDGTSVTWKLKQGVRWHDGKPFTADDVVFTWQYAADLATAAYTTGSYQNIK-VEKIDDHTVKVIFKAPPPFWADPFVGAVGQILPKHHFGDYAGAKSRDA----PGNLKPVGTGPYKFVEFKPGDLILAERNPDYHVKNQPYFDTLEVKGGGDAVSAARAVLQTGEYDYAWNLLVEDEVLKRMEASGKGKVEFTLS- A0A2A6N4T9/57-334 ----------SQILLWNDVAMADATLPYKP------TKAGGGGPLKILIWQAPTLLNPHFALGTKDQVASRIFFEPLAGWDREGNLIPCLAAEVPTKANGGLSPDGTSVTWKLKQGVRWHDGKPFTADDVVFTWQYAADLATAAYTTGSYQNIK-VEKIDDHTVKVIFKAPTPFWADPFVGAVGQILPKHHFGDYAGAKSRDA----PGNLKPVGTGPYKFVEFKPGDLILAERNPDYHVKNQPYFDTLEVKGGGDAVSAARAVLQTGEYDYAWNLLVEDEVLKRMEASGKGKVEFTLS- A0A0E4FUB0/49-304 ---------------------AEGVSTYKP------TKRGGGGALKLLWWQGPTLLNPHFATGTKDQDGSRLFYEPLACWDPDGNMKLVLAAEIPSIQNGGLAADGKSVTWKLKPGVKWPDGKPFTADDVVFNWEYAKDPATSAVTIATYRDIV-VEKVDDLTVRILFNKPTPFWADAFVGAPNTIIPKHLFADYKGAKSREA----PNNLSPVGTGPYKFLEFKPGDLVRGELNPDYHMPNRPYFDTLEMKGGGDAVSAARAVIQTGEYDFGYNIQVEDDVLLRLEK------------ #=GC scorecons 000000000001211111263535433446000000644556748568299767599976749699435655559999457457674649989796348976679748779967576675995597679759763844746755354557448307656973966756649675444599953639667548466397665460000649839799676654797979563374974964454549655759999995797999469784977596575557843422111110000000 #=GC scorecons_70 _____________________________*___________**_*__*_*****_******_****___*____****__*__*_*_*_*******__***__***_*******_**_*_**__******_***_*__*_**_______*__*__**_***_**_*_**_*_*_____***____**_*__*_**_***__________**_********__******_*__*_**_**______**__*_******_******__***_***_**_*___**_________________ #=GC scorecons_80 __________________________________________*_*__*_**__*_****_*_*_**________****__*________******___***___**_*****_*_*__*_**__**__**_**__*__*__*_______*__*__*___**_*_______*_*_____***____*__*__*____*____________**_*_**______******____*_**_*_______*___*_******_******__***_**__*__*___**_________________ #=GC scorecons_90 _________________________________________________**____***____*_**________****___________**_*_*___**____*__*__**________**__*___*__*___*________________*______*__*_______*_______***____*_____*____*____________*__*_**_______*_*_*______*__*_______*_____******__*_***__*_*_*___*_________________________ //