# STOCKHOLM 1.0 #=GF ID 3.40.190.10/FF/000226 #=GF DE Peptide ABC transporter substrate-binding protein #=GF AC 3.40.190.10/FF/000226 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 97.238 #=GS Q3Z8Y3/42-66_190-286_501-512 AC Q3Z8Y3 #=GS Q3Z8Y3/42-66_190-286_501-512 OS Dehalococcoides mccartyi 195 #=GS Q3Z8Y3/42-66_190-286_501-512 DE Oligopeptide-binding protein, putative #=GS Q3Z8Y3/42-66_190-286_501-512 DR ORG; Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides; Dehalococcoides mccartyi; #=GS Q3Z8Y3/42-66_190-286_501-512 DR GO; GO:0006857; GO:0042277; #=GS A5I1I9/55-69_185-277_494-508 AC A5I1I9 #=GS A5I1I9/55-69_185-277_494-508 OS Clostridium botulinum A str. Hall #=GS A5I1I9/55-69_185-277_494-508 DE ABC transporter, substrate-binding lipoprotein #=GS A5I1I9/55-69_185-277_494-508 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS Q74D86/47-69_185-279_502-515 AC Q74D86 #=GS Q74D86/47-69_185-279_502-515 OS Geobacter sulfurreducens PCA #=GS Q74D86/47-69_185-279_502-515 DE Peptide ABC transporter, periplasmic peptide-binding lipoprotein #=GS Q74D86/47-69_185-279_502-515 DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter sulfurreducens; #=GS B5YL55/40-59_175-269_490-503 AC B5YL55 #=GS B5YL55/40-59_175-269_490-503 OS Thermodesulfovibrio yellowstonii DSM 11347 #=GS B5YL55/40-59_175-269_490-503 DE Oligopeptide-binding protein AppA #=GS B5YL55/40-59_175-269_490-503 DR ORG; Bacteria; Nitrospirae; Nitrospira; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio; Thermodesulfovibrio yellowstonii; #=GS Q9RU24/48-68_200-307_554-566 AC Q9RU24 #=GS Q9RU24/48-68_200-307_554-566 OS Deinococcus radiodurans R1 #=GS Q9RU24/48-68_200-307_554-566 DE Probable ABC transporter-binding protein DR_1571 #=GS Q9RU24/48-68_200-307_554-566 DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus; Deinococcus radiodurans; #=GS Q9WZ01/50-70_195-301_546-559 AC Q9WZ01 #=GS Q9WZ01/50-70_195-301_546-559 OS Thermotoga maritima MSB8 #=GS Q9WZ01/50-70_195-301_546-559 DE Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #=GS Q9WZ01/50-70_195-301_546-559 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS R4P0P9/50-70_195-301_546-559 AC R4P0P9 #=GS R4P0P9/50-70_195-301_546-559 OS Thermotoga maritima MSB8 #=GS R4P0P9/50-70_195-301_546-559 DE Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA #=GS R4P0P9/50-70_195-301_546-559 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS O67429/62-83_207-311_552-565 AC O67429 #=GS O67429/62-83_207-311_552-565 OS Aquifex aeolicus VF5 #=GS O67429/62-83_207-311_552-565 DE Transporter (Extracellular solute binding protein family 5) #=GS O67429/62-83_207-311_552-565 DR ORG; Bacteria; Aquificae; Aquificae; Aquificales; Aquificaceae; Aquifex; Aquifex aeolicus; #=GS B8E2R4/38-61_170-268_489-499 AC B8E2R4 #=GS B8E2R4/38-61_170-268_489-499 OS Dictyoglomus turgidum DSM 6724 #=GS B8E2R4/38-61_170-268_489-499 DE 4-phytase #=GS B8E2R4/38-61_170-268_489-499 DR ORG; Bacteria; Dictyoglomi; Dictyoglomia; Dictyoglomales; Dictyoglomaceae; Dictyoglomus; Dictyoglomus turgidum; #=GS P73693/74-93_220-330_579-592 AC P73693 #=GS P73693/74-93_220-330_579-592 OS Synechocystis sp. PCC 6803 substr. Kazusa #=GS P73693/74-93_220-330_579-592 DE Extracellular solute-binding protein #=GS P73693/74-93_220-330_579-592 DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; #=GS L8AJB0/74-93_220-330_579-592 AC L8AJB0 #=GS L8AJB0/74-93_220-330_579-592 OS Bacillus subtilis BEST7613 #=GS L8AJB0/74-93_220-330_579-592 DE ABC transporter substrate-binding protein #=GS L8AJB0/74-93_220-330_579-592 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; #=GS A0A0U9HPN0/39-58_174-268_489-502 AC A0A0U9HPN0 #=GS A0A0U9HPN0/39-58_174-268_489-502 OS Thermodesulfovibrio aggregans #=GS A0A0U9HPN0/39-58_174-268_489-502 DE Peptide/nickel transport system substrate-binding protein #=GS A0A0U9HPN0/39-58_174-268_489-502 DR ORG; Bacteria; Nitrospirae; Nitrospira; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio; Thermodesulfovibrio aggregans; #=GS A0A0B5L124/50-70_195-301_546-559 AC A0A0B5L124 #=GS A0A0B5L124/50-70_195-301_546-559 OS Thermotoga sp. RQ7 #=GS A0A0B5L124/50-70_195-301_546-559 DE Peptide ABC transporter substrate-binding protein #=GS A0A0B5L124/50-70_195-301_546-559 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga sp. RQ7; #=GS A0A0M1L691/55-69_185-277_494-508 AC A0A0M1L691 #=GS A0A0M1L691/55-69_185-277_494-508 OS Clostridium botulinum #=GS A0A0M1L691/55-69_185-277_494-508 DE Bacterial extracellular solute-binding s, 5 Middle family protein #=GS A0A0M1L691/55-69_185-277_494-508 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS B1L0I1/55-69_185-277_494-508 AC B1L0I1 #=GS B1L0I1/55-69_185-277_494-508 OS Clostridium botulinum A3 str. Loch Maree #=GS B1L0I1/55-69_185-277_494-508 DE Peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein #=GS B1L0I1/55-69_185-277_494-508 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS A0A0D5NDJ3/47-69_185-279_502-515 AC A0A0D5NDJ3 #=GS A0A0D5NDJ3/47-69_185-279_502-515 OS Geobacter sulfurreducens #=GS A0A0D5NDJ3/47-69_185-279_502-515 DE Peptide-binding protein #=GS A0A0D5NDJ3/47-69_185-279_502-515 DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter sulfurreducens; #=GF SQ 16 Q3Z8Y3/42-66_190-286_501-512 GEEPYTLDPAKVSDTTSVAYIY-----QIFKNNVSS-GSDWWKKPVGTGPFMLTELTQGNYIILDRNPDY--Y------DTPAKISSVIFRLQSGQPMDL--YEVGGVDVAGVGADYLAKATDPD---GIFASDLQVI----PQLSYILVKPYVKGY- A5I1I9/55-69_185-277_494-508 -----KLNPVLAPAYAND---------LINNAEFNQ-------KPIGAGPFKFVKWEKGNNITLSKFEDY--YGKDKTGN----VEKFIFKFIPDYNVRAMQLETGEIDLAYVEPSQVAKLEKLEKIKIY----NENT----AVNAIYAVNKKVTGIK Q74D86/47-69_185-279_502-515 -GEPSNLLPLLASDSASHEVAG-----NITKSELSR-------RPVGTGPYRFKEWVAGQKIVLESNHDY--Y------EGRPYIDRYIYRIIPDNSTMYLELKAGGVDLMGLSPVQYARQTDTPEFRSRFAKYRYPA----SPDALPAVSARFRGI- B5YL55/40-59_175-269_490-503 ----KRLLPLFASDSASADISG-----RIFSSPLNR-------NPIGTGPYKMKEWITGQRIILQKNEDY--Y------EGAPFFEKFISRIIPDPSTMFLELRFGGIDFMGLNPAQYKYYGEKSYFKKYFNVYRYPS----FPDTIIAVNKRIKGI- Q9RU24/48-68_200-307_554-566 --DFKTLNPFVSSESPNLPAVL----------SWTI--STNPDNIVTSGPFMLDRYVRGERAILKKNPYFGEWNKDSAGKSLPYLDGIQINIVADANAQLAQFLAGNLDTYSPDNRDKLAQVKSAMDGGKVKGTLIPNASARAQTVHFAWTDRVQG-- Q9WZ01/50-70_195-301_546-559 ---PRTCNNVVAQETSSRDVIA-----RFFKEFWTV-DAINKGEIVGLGPFIPVEYVPDQYVRFVKNPYY--WKYDKEGKQLPYLDGIIFKIIPTQDAQRLAFENGEVDVYGPRGTEYAELKAMAREKDWVVGIGGPN----FQLYLYAYSNKLHNV- R4P0P9/50-70_195-301_546-559 ---PRTCNNVVAQETSSRDVIA-----RFFKEFWTV-DAINKGEIVGLGPFIPVEYVPDQYVRFVKNPYY--WKYDKEGKQLPYLDGIIFKIIPTQDAQRLAFENGEVDVYGPRGTEYAELKAMAREKDWVVGIGGPN----FQLYLYAYSNKLHNV- O67429/62-83_207-311_552-565 --DPKTLNPALAMETSSTAVIG-----DLFSTAWNV--NTNPKEIVGTGAYKIEEYVKGQRVVYRANPYY--YEKDENGNRLPYIKEKVGVIIPDPDTALLKFVNGEIDYIGVRAQDLLFLANQK-DKDFVVYDLGAT----PPKSMVAVKKHLKNV- B8E2R4/38-61_170-268_489-499 -NDPPTLDPAMITDTASDEVAR-----QIFKEEVERLGKDFATKPVGTGAFMFDEWKHDVKVRLKANPKY--F------RGRPYVDAIEWMIIPDENVDFMNFEKGQLDITGIPDPEWDRVSNDPKYKPYIL--------EKPMISQVIYQPWVHG-- P73693/74-93_220-330_579-592 --DPKTFNAVLSQESPN--VFGYINGNPLFLSTWGT--NTPPDQIVVNGPYKLTRYVTSQRVIFSKNPYY--WEKGPNGESLPYIPRVVWAIVESTDTSLLQFRSGSLDSLGVPPESFSLLKQEEERGNFVIYNGGPT----YPYSLSAVRNRFCGI- L8AJB0/74-93_220-330_579-592 --DPKTFNAVLSQESPN--VFGYINGNPLFLSTWGT--NTPPDQIVVNGPYKLTRYVTSQRVIFSKNPYY--WEKGPNGESLPYIPRVVWAIVESTDTSLLQFRSGSLDSLGVPPESFSLLKQEEERGNFVIYNGGPT----YPYSLSAVRNRFCGI- A0A0U9HPN0/39-58_174-268_489-502 ----KRLLPLFASDSASADISG-----RIFNSPLNR-------NPIGTGPYKMKEWITGQRVILERNENY--Y------EGVPFFEKIITRIIPDPSTMFLELRFGGIDFMALNPAQYKYYGEKPYFRKYFNVYRYPS----FPDTIIAVNKRIKGI- A0A0B5L124/50-70_195-301_546-559 ---PRTCNDVVAQETSSRDVIA-----RFFKEFWTV-DSINKGEIVGLGPFIPVEYVPDQYVRFVKNPYY--WKYDKDGKQLPYLDGIIFKIIPTQDAQRLAFENGEVDVYGPRGTEYAELKAMAQEKGWVVGVGGPN----FQLYLYAYSNKLHNL- A0A0M1L691/55-69_185-277_494-508 -----KLNPVLAPAYAND---------LINNAEFNQ-------KPIGAGPFKFVKWEKGNNITLSKFEDY--YGKDKTGN----VEKFIFKFIPDYNVRAMQLETGEIDLAYVEPSQVAKLEKLEKIKIY----NENT----AVNAIYAVNKKVTGIK B1L0I1/55-69_185-277_494-508 -----KLNPVLAPAYAND---------LINNAEFNQ-------KPIGAGPFKFVKWEKGNNITLSKFEDY--YSKDKTGN----VEKFIFKFIPDYNVRAMQLETGEIDLAYVEPSQVAKLENLEKIKIY----NENT----AVNAIYAVNKKVTGIK A0A0D5NDJ3/47-69_185-279_502-515 -GEPSNLLPLLASDSASHEVAG-----NITKSELSR-------RPVGTGPYRFKEWVAGQKIVLESNHDY--Y------EGRPYIDRYIYRIIPDNSTMYLELKAGGVDLMGLSPVQYARQTDTPEFRSRFAKYRYPA----SPDALPAVSARFRGI- #=GC scorecons 00132555555545456223220000025433344300111114576497744355435546463564480051221134225454445346665344335364394593354343434343323224333211224400003434437544553640 #=GC scorecons_70 _____________________________________________**_***__________*_*__*__*_____________________**____________*__*_______________________________________*______*__ #=GC scorecons_80 _____________________________________________*__***__________________*___________________________________*__*_______________________________________*_________ #=GC scorecons_90 ________________________________________________*____________________*___________________________________*__*_________________________________________________ //