# STOCKHOLM 1.0
#=GF ID 3.40.190.10/FF/000196
#=GF DE Amino acid ABC transporter
#=GF AC 3.40.190.10/FF/000196
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 88.199
#=GS Q2FX86/133-225      AC Q2FX86
#=GS Q2FX86/133-225      OS Staphylococcus aureus subsp. aureus NCTC 8325
#=GS Q2FX86/133-225      DE ABC transporter, permease protein, putative
#=GS Q2FX86/133-225      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A9U700/115-208      AC A9U700
#=GS A9U700/115-208      OS Physcomitrella patens
#=GS A9U700/115-208      DE Predicted protein
#=GS A9U700/115-208      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A0A0H3JN52/89-181   AC A0A0H3JN52
#=GS A0A0H3JN52/89-181   OS Staphylococcus aureus subsp. aureus N315
#=GS A0A0H3JN52/89-181   DE SA1675 protein
#=GS A0A0H3JN52/89-181   DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A5I3E2/137-229      AC A5I3E2
#=GS A5I3E2/137-229      OS Clostridium botulinum A str. Hall
#=GS A5I3E2/137-229      DE Probable amino acid abc transporter,substrate-binding protein
#=GS A5I3E2/137-229      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS Q8Y527/135-227      AC Q8Y527
#=GS Q8Y527/135-227      OS Listeria monocytogenes EGD-e
#=GS Q8Y527/135-227      DE ArpJ protein
#=GS Q8Y527/135-227      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A402W6S1/135-227  AC A0A402W6S1
#=GS A0A402W6S1/135-227  OS Salmonella enterica
#=GS A0A402W6S1/135-227  DE ABC transporter permease subunit
#=GS A0A402W6S1/135-227  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; 
#=GS A0A1E8XFD2/133-225  AC A0A1E8XFD2
#=GS A0A1E8XFD2/133-225  OS Staphylococcus sp. HMSC055H04
#=GS A0A1E8XFD2/133-225  DE Glutamate ABC transporter permease
#=GS A0A1E8XFD2/133-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus sp. HMSC055H04; 
#=GS A0A2G7HM92/137-229  AC A0A2G7HM92
#=GS A0A2G7HM92/137-229  OS Clostridium combesii
#=GS A0A2G7HM92/137-229  DE Amino acid ABC transporter
#=GS A0A2G7HM92/137-229  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium combesii; 
#=GS A0A1V9IIJ0/137-229  AC A0A1V9IIJ0
#=GS A0A1V9IIJ0/137-229  OS Clostridium sporogenes
#=GS A0A1V9IIJ0/137-229  DE Arginine-binding extracellular protein ArtP
#=GS A0A1V9IIJ0/137-229  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sporogenes; 
#=GS G2ZEE9/135-227      AC G2ZEE9
#=GS G2ZEE9/135-227      OS Listeria ivanovii subsp. ivanovii PAM 55
#=GS G2ZEE9/135-227      DE Putative amino acid ABC transporter, permease protein
#=GS G2ZEE9/135-227      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria ivanovii; Listeria ivanovii subsp. ivanovii; 
#=GS X5E0B5/133-225      AC X5E0B5
#=GS X5E0B5/133-225      OS Staphylococcus aureus
#=GS X5E0B5/133-225      DE ABC transporter permease
#=GS X5E0B5/133-225      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A0A0H3JS32/89-181   AC A0A0H3JS32
#=GS A0A0H3JS32/89-181   OS Staphylococcus aureus subsp. aureus Mu50
#=GS A0A0H3JS32/89-181   DE Similar to glutamine-binding periplasmic protein
#=GS A0A0H3JS32/89-181   DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H3JX15/133-225  AC A0A0H3JX15
#=GS A0A0H3JX15/133-225  OS Staphylococcus aureus subsp. aureus MW2
#=GS A0A0H3JX15/133-225  DE MW1799 protein
#=GS A0A0H3JX15/133-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS T1YAL7/133-225      AC T1YAL7
#=GS T1YAL7/133-225      OS Staphylococcus aureus subsp. aureus CN1
#=GS T1YAL7/133-225      DE Arginine-binding protein
#=GS T1YAL7/133-225      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H2WXI6/133-225  AC A0A0H2WXI6
#=GS A0A0H2WXI6/133-225  OS Staphylococcus aureus subsp. aureus COL
#=GS A0A0H2WXI6/133-225  DE Amino acid ABC transporter, permease/substrate-binding protein
#=GS A0A0H2WXI6/133-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H2XH31/133-225  AC A0A0H2XH31
#=GS A0A0H2XH31/133-225  OS Staphylococcus aureus subsp. aureus USA300
#=GS A0A0H2XH31/133-225  DE Amino acid ABC transporter, permease/substrate-binding protein
#=GS A0A0H2XH31/133-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0E1ALJ9/133-225  AC A0A0E1ALJ9
#=GS A0A0E1ALJ9/133-225  OS Staphylococcus aureus subsp. aureus Z172
#=GS A0A0E1ALJ9/133-225  DE Glutamate ABC transporter, periplasmic glutamine-binding protein
#=GS A0A0E1ALJ9/133-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0E1VGG0/133-225  AC A0A0E1VGG0
#=GS A0A0E1VGG0/133-225  OS Staphylococcus aureus subsp. aureus USA300_TCH959
#=GS A0A0E1VGG0/133-225  DE ABC transporter, permease protein
#=GS A0A0E1VGG0/133-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H3K9A2/133-225  AC A0A0H3K9A2
#=GS A0A0H3K9A2/133-225  OS Staphylococcus aureus subsp. aureus str. Newman
#=GS A0A0H3K9A2/133-225  DE Extracellular glutamine-binding protein
#=GS A0A0H3K9A2/133-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A3A8AMP7/137-229  AC A0A3A8AMP7
#=GS A0A3A8AMP7/137-229  OS Clostridium botulinum
#=GS A0A3A8AMP7/137-229  DE Amino acid ABC transporter
#=GS A0A3A8AMP7/137-229  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A7GEY2/137-229      AC A7GEY2
#=GS A7GEY2/137-229      OS Clostridium botulinum F str. Langeland
#=GS A7GEY2/137-229      DE Polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein
#=GS A7GEY2/137-229      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS B1KUR7/137-229      AC B1KUR7
#=GS B1KUR7/137-229      OS Clostridium botulinum A3 str. Loch Maree
#=GS B1KUR7/137-229      DE Polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein
#=GS B1KUR7/137-229      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GF SQ 22
Q2FX86/133-225              IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A9U700/115-208              CTGGVIVSKKGGPKTAKDLQGKVVGVQIGTTYMEAAQKIPGIKQVRTYQKDPDALQDLLSGRLDAWITDRFVAKEAIKERKLENTLQLGELV---GP
A0A0H3JN52/89-181           IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A5I3E2/137-229              SV-VVRAEDKDKFKSLEEFKGKKIGVQKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGK---NLAVSNIKFENKD
Q8Y527/135-227              RV-VIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDK---TLAMADIKFSNGS
A0A402W6S1/135-227          RV-VIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDK---TLAMADIKFSNGS
A0A1E8XFD2/133-225          IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A2G7HM92/137-229          SV-VVRAEDKDKFKSLEEFKGKKIGVQKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGK---NLAVSNIKFENKD
A0A1V9IIJ0/137-229          SV-VVRAEDKDKFKSLEEFKGKKIGVQKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGK---NLAVSNIKFENKD
G2ZEE9/135-227              RV-VVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNELIGSDVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYLSQDK---TLAMADIKFVNGS
X5E0B5/133-225              IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A0H3JS32/89-181           IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A0H3JX15/133-225          IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
T1YAL7/133-225              IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A0H2WXI6/133-225          IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A0H2XH31/133-225          IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A0E1ALJ9/133-225          IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A0E1VGG0/133-225          IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A0H3K9A2/133-225          IM-LVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNP---KLGISNVKFNEEE
A0A3A8AMP7/137-229          SV-VVRAEDKDKFKSLEEFKGKKIGVQKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGK---NLAVSNIKFENKD
A7GEY2/137-229              SV-VVRAEDKDKFKSLEEFKGKKIGVQKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGK---NLAVSNIKFENKD
B1KUR7/137-229              SV-VVRAEDKDKFKSLDEFKGKKIGVQKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGK---NLAVSNIKFENKD
#=GC scorecons              4505855555556655578556779697695776596475455474774756956749565887648584799557565450004955666773454
#=GC scorecons_70           ____*________*___**__****_****_**__**_*_____*_**_*_**_**_*_*_****_*_*_***__*_*_______*__*****____
#=GC scorecons_80           ____*____________**___***_**_*_**__*__*_____*_**____*__*_*___**___*_*_***__*_________*_____**____
#=GC scorecons_90           ____*___________________*_*__*_____*________________*____*___*____*_*__**____________*___________
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