# STOCKHOLM 1.0
#=GF ID 3.40.1690.20/FF/000007
#=GF DE ATP dependent metalloprotease
#=GF AC 3.40.1690.20/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 77.548
#=GS P39925/137-223      AC P39925
#=GS P39925/137-223      OS Saccharomyces cerevisiae S288C
#=GS P39925/137-223      DE Mitochondrial respiratory chain complexes assembly protein AFG3
#=GS P39925/137-223      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P39925/137-223      DR GO; GO:0001302; GO:0002181; GO:0005515; GO:0005739; GO:0005743; GO:0005745; GO:0006465; GO:0006508; GO:0008237; GO:0016887; GO:0030150; GO:0034622; GO:0097002; 
#=GS Q5AJC2/122-223      AC Q5AJC2
#=GS Q5AJC2/122-223      OS Candida albicans SC5314
#=GS Q5AJC2/122-223      DE AAA family ATPase
#=GS Q5AJC2/122-223      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q5AJC2/122-223      DR GO; GO:0005886; 
#=GS Q6CFY2/110-207      AC Q6CFY2
#=GS Q6CFY2/110-207      OS Yarrowia lipolytica CLIB122
#=GS Q6CFY2/110-207      DE YALI0B02574p
#=GS Q6CFY2/110-207      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS Q75EQ4/89-190       AC Q75EQ4
#=GS Q75EQ4/89-190       OS Eremothecium gossypii ATCC 10895
#=GS Q75EQ4/89-190       DE AAR025Cp
#=GS Q75EQ4/89-190       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS B9WDE1/121-222      AC B9WDE1
#=GS B9WDE1/121-222      OS Candida dubliniensis CD36
#=GS B9WDE1/121-222      DE Mitochondrial respiratory chain complexes assembly protein, putative
#=GS B9WDE1/121-222      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS A0A0L8VRW1/137-223  AC A0A0L8VRW1
#=GS A0A0L8VRW1/137-223  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VRW1/137-223  DE AFG3p Mitochondrial inner membrane m-AAA protease component
#=GS A0A0L8VRW1/137-223  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS H0GF03/101-187      AC H0GF03
#=GS H0GF03/101-187      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GF03/101-187      DE Afg3p
#=GS H0GF03/101-187      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8RKF1/137-224  AC A0A0L8RKF1
#=GS A0A0L8RKF1/137-224  OS Saccharomyces eubayanus
#=GS A0A0L8RKF1/137-224  DE AFG3-like protein
#=GS A0A0L8RKF1/137-224  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS C4YPV3/122-223      AC C4YPV3
#=GS C4YPV3/122-223      OS Candida albicans WO-1
#=GS C4YPV3/122-223      DE Uncharacterized protein
#=GS C4YPV3/122-223      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS G2WCP9/137-223      AC G2WCP9
#=GS G2WCP9/137-223      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WCP9/137-223      DE K7_Afg3p
#=GS G2WCP9/137-223      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1PA83/137-223      AC N1PA83
#=GS N1PA83/137-223      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1PA83/137-223      DE Afg3p
#=GS N1PA83/137-223      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZQW5/137-223      AC A6ZQW5
#=GS A6ZQW5/137-223      OS Saccharomyces cerevisiae YJM789
#=GS A6ZQW5/137-223      DE ATP dependent metalloprotease
#=GS A6ZQW5/137-223      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LS29/137-223      AC B3LS29
#=GS B3LS29/137-223      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LS29/137-223      DE ATP dependent metalloprotease
#=GS B3LS29/137-223      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GKJ5/137-223      AC C7GKJ5
#=GS C7GKJ5/137-223      OS Saccharomyces cerevisiae JAY291
#=GS C7GKJ5/137-223      DE Afg3p
#=GS C7GKJ5/137-223      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A1H6PRV8/110-207  AC A0A1H6PRV8
#=GS A0A1H6PRV8/110-207  OS Yarrowia lipolytica
#=GS A0A1H6PRV8/110-207  DE Uncharacterized protein
#=GS A0A1H6PRV8/110-207  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GF SQ 15
P39925/137-223              -----SNNSGDDSNRVLTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSS
Q5AJC2/122-223              -TFYLINRTSESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEAELIPGAVSNISHNRN---GKPYVVFTIGSLEFFEDEMNKVQDRLKIPINERLPVVYEDHTS
Q6CFY2/110-207              LSWYLSSPSNSGP--KLSWQEFQSGYLEKGMVKKMTVENGQRVVAELTSPVQQPNGT------TTSIVEFAIGSVESFERRMEEAQDALHIAAADRIPIHYVRRSS
Q75EQ4/89-190               ----LLSRSGEQPEEALTMQDFKTRYLEKGLVKKLYVVNRQVVEAELLPQAGDGRGEAFGLGMRGPVVGFTIGSVDIFEEQLDQAQDKLGIPQNERIPVTYVERTS
B9WDE1/121-222              -TFYLINRTSESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEAELIPGAVSNISHNRN---GKPYVIFTIGSLEFFEDEMNKVQERLNIPINERLPIVYEDHTS
A0A0L8VRW1/137-223          -----SNNSGDDSNRVLTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSS
H0GF03/101-187              -----SNNSGDDSNRVLTFQDFKTKYLEKGLVSKIYVVSKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSS
A0A0L8RKF1/137-224          ----SNNNSADDSNRILTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPVKYIERSS
C4YPV3/122-223              -TFYLINRTSESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEAELIPGAVSNISHNRN---GKPYVVFTIGSLEFFEDEMNKVQDRLKIPINERLPVVYEDHTS
G2WCP9/137-223              -----SNNSGDDSNRVLTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSS
N1PA83/137-223              -----SNNSGDDSNRVLTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSS
A6ZQW5/137-223              -----SNNSGDDSNRVLTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSS
B3LS29/137-223              -----SNNSGDDSNRVLTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSS
C7GKJ5/137-223              -----SNNSGDDSNRVLTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVN--------------TKQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSS
A0A1H6PRV8/110-207          LSWYLSSPSNSGP--KLSWQEFQSGYLEKGMVKKMTVENGQRVVAELTSPVQQPNGT------TTSIVEFAIGSVESFERRMEEAQDALHIAAADRIPIHYVRRSS
#=GC scorecons              0111246464544233975979474969997949549686349699954111111110000005544939799967499558655983959744796973945669
#=GC scorecons_70           ______*_*_______**_***_*_*******_*__***___*****____________________*_*******_**__*___**_*_**__*****_*__*_*
#=GC scorecons_80           ________________*__***___*_*****_*__*_*___*_***____________________*_*****___**__*___**_*_*____*_**_*____*
#=GC scorecons_90           ________________*__*_*___*_***_*_*__*_*___*_***____________________*_*_***___**__*___**_*_*____*_*__*____*
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