# STOCKHOLM 1.0 #=GF ID 3.40.1280.10/FF/000058 #=GF DE rRNA methylase, SpoU family protein #=GF AC 3.40.1280.10/FF/000058 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 66.713 #=GS A8BHT7/973-1126 AC A8BHT7 #=GS A8BHT7/973-1126 OS Giardia lamblia ATCC 50803 #=GS A8BHT7/973-1126 DE TAR RNA loop binding protein, putative #=GS A8BHT7/973-1126 DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; #=GS H3EV32/223-365 AC H3EV32 #=GS H3EV32/223-365 OS Pristionchus pacificus #=GS H3EV32/223-365 DE Uncharacterized protein #=GS H3EV32/223-365 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS C3ZMU7/1444-1561 AC C3ZMU7 #=GS C3ZMU7/1444-1561 OS Branchiostoma floridae #=GS C3ZMU7/1444-1561 DE Uncharacterized protein #=GS C3ZMU7/1444-1561 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS V6TJB2/1597-1750 AC V6TJB2 #=GS V6TJB2/1597-1750 OS Giardia intestinalis #=GS V6TJB2/1597-1750 DE rRNA methylase, SpoU family protein #=GS V6TJB2/1597-1750 DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; #=GF SQ 4 A8BHT7/973-1126 ----------------LIINASLLDKTTNLGGLARTAEVFGLDTLVLGNTSFALDPSFKAMSMTADMWLNIEEVQPCNLVQWIAEKKKDDYSVVCLEQSSRSVYLQDADLPRKAVLVLGNERKGCPEEILSLCDMTVEIQQLGNIRSLNVHVSCAIFVWKWACQHRFSTA H3EV32/223-365 --KEDGERERRREGKSIYVVASFIDKAANLGGLCRTSEIFTVDRLVVADAAIVNDATFKALSMSAESWQKIEEVRPDALPAWLAEMKRRGYALVAAEQASDSVPLHRYQFPEKTVLIMGDEKRGVPMAILRAVDAIVHIEQLGR-------------------------C C3ZMU7/1444-1561 LNMADMHIKVVRKG-HLVVVASLIDKPTNLGGLCRTCEIFGVSTLVLGSMKYVEDKTFQQLSVSSQGWVNIQEVRPGELPEYVEEMRRQGYFLIGVEQTADSRNLTEFTFPDKSLLLLG--------------------------------------------------- V6TJB2/1597-1750 ----------------LIINASLLDKTTNLGGLARTAEVFGLDTLVLGNTSFALDPSFKAMSMTADMWLNIEEVQPCNLVQWIAEKKKDGYSVVCLEQSSRSVYLQDADLPRKAVLVLGNERKGCPEELLSLCDMTVEIQQLGNIRSLNVHVSCAIFVWKWACQHRFSTA #=GC scorecons 00002000000202006364996599469999949939695555996643345293596569655439369699593394355594663693563499454942934335949469569232231311231113123132333111111111111111111111111111 #=GC scorecons_70 ________________*_*_***_**_******_**_***____***_______*__*___*_____*__*_**_*__*_____*_**_**__*__**___*__*_____*_*__*_**___________________________________________________ #=GC scorecons_80 ____________________**__**__*****_**_*_*____**________*__*___*_____*__*_**_*__*_____*_____*_____**___*__*_____*_*__*__*___________________________________________________ #=GC scorecons_90 ____________________**__**__*****_**_*_*____**________*__*___*_____*__*_**_*__*_____*_____*_____**___*__*_____*_*__*__*___________________________________________________ //