# STOCKHOLM 1.0
#=GF ID 3.40.1280.10/FF/000025
#=GF DE Mitochondrial rRNA methyltransferase 1
#=GF AC 3.40.1280.10/FF/000025
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 74.779
#=GS Q6IN84/136-322      AC Q6IN84
#=GS Q6IN84/136-322      OS Homo sapiens
#=GS Q6IN84/136-322      DE rRNA methyltransferase 1, mitochondrial
#=GS Q6IN84/136-322      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q6IN84/136-322      DR GO; GO:0000451; GO:0003723; GO:0005515; GO:0005739; GO:0005759; GO:0070039; 
#=GS Q99J25/130-318      AC Q99J25
#=GS Q99J25/130-318      OS Mus musculus
#=GS Q99J25/130-318      DE rRNA methyltransferase 1, mitochondrial
#=GS Q99J25/130-318      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q99J25/130-318      DR GO; GO:0005739; GO:0070039; 
#=GS W5MC38/144-313      AC W5MC38
#=GS W5MC38/144-313      OS Lepisosteus oculatus
#=GS W5MC38/144-313      DE Uncharacterized protein
#=GS W5MC38/144-313      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS H9G6C9/138-317      AC H9G6C9
#=GS H9G6C9/138-317      OS Anolis carolinensis
#=GS H9G6C9/138-317      DE Uncharacterized protein
#=GS H9G6C9/138-317      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GS F7DZ27/207-407      AC F7DZ27
#=GS F7DZ27/207-407      OS Monodelphis domestica
#=GS F7DZ27/207-407      DE Uncharacterized protein
#=GS F7DZ27/207-407      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; 
#=GS A7MBD2/142-344      AC A7MBD2
#=GS A7MBD2/142-344      OS Bos taurus
#=GS A7MBD2/142-344      DE MRM1 protein
#=GS A7MBD2/142-344      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS G1LNU9/143-332      AC G1LNU9
#=GS G1LNU9/143-332      OS Ailuropoda melanoleuca
#=GS G1LNU9/143-332      DE Uncharacterized protein
#=GS G1LNU9/143-332      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda; Ailuropoda melanoleuca; 
#=GS F6SV11/136-324      AC F6SV11
#=GS F6SV11/136-324      OS Equus caballus
#=GS F6SV11/136-324      DE Mitochondrial rRNA methyltransferase 1
#=GS F6SV11/136-324      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS F1S1B8/148-310      AC F1S1B8
#=GS F1S1B8/148-310      OS Sus scrofa
#=GS F1S1B8/148-310      DE Uncharacterized protein
#=GS F1S1B8/148-310      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; 
#=GS M3X736/142-335      AC M3X736
#=GS M3X736/142-335      OS Felis catus
#=GS M3X736/142-335      DE Uncharacterized protein
#=GS M3X736/142-335      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS M3YUE2/138-336      AC M3YUE2
#=GS M3YUE2/138-336      OS Mustela putorius furo
#=GS M3YUE2/138-336      DE Mitochondrial rRNA methyltransferase 1
#=GS M3YUE2/138-336      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Mustelinae; Mustela; Mustela putorius; Mustela putorius furo; 
#=GS E2RN23/133-325      AC E2RN23
#=GS E2RN23/133-325      OS Canis lupus familiaris
#=GS E2RN23/133-325      DE Mitochondrial rRNA methyltransferase 1
#=GS E2RN23/133-325      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS W5QB91/141-345      AC W5QB91
#=GS W5QB91/141-345      OS Ovis aries
#=GS W5QB91/141-345      DE Uncharacterized protein
#=GS W5QB91/141-345      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GS A0A2Y9K1Z5/146-337  AC A0A2Y9K1Z5
#=GS A0A2Y9K1Z5/146-337  OS Enhydra lutris kenyoni
#=GS A0A2Y9K1Z5/146-337  DE rRNA methyltransferase 1, mitochondrial isoform X1
#=GS A0A2Y9K1Z5/146-337  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Lutrinae; Enhydra; Enhydra lutris; Enhydra lutris kenyoni; 
#=GS A0A3Q7SA66/138-329  AC A0A3Q7SA66
#=GS A0A3Q7SA66/138-329  OS Vulpes vulpes
#=GS A0A3Q7SA66/138-329  DE rRNA methyltransferase 1, mitochondrial
#=GS A0A3Q7SA66/138-329  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes; Vulpes vulpes; 
#=GS A0A3Q7Y6F9/148-306  AC A0A3Q7Y6F9
#=GS A0A3Q7Y6F9/148-306  OS Ursus arctos horribilis
#=GS A0A3Q7Y6F9/148-306  DE rRNA methyltransferase 1, mitochondrial isoform X2
#=GS A0A3Q7Y6F9/148-306  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus arctos; Ursus arctos horribilis; 
#=GS A0A452DXF3/141-344  AC A0A452DXF3
#=GS A0A452DXF3/141-344  OS Capra hircus
#=GS A0A452DXF3/141-344  DE Uncharacterized protein
#=GS A0A452DXF3/141-344  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Capra; Capra hircus; 
#=GS D3ZK81/130-317      AC D3ZK81
#=GS D3ZK81/130-317      OS Rattus norvegicus
#=GS D3ZK81/130-317      DE Mitochondrial rRNA methyltransferase 1
#=GS D3ZK81/130-317      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS F6Y1D2/136-321      AC F6Y1D2
#=GS F6Y1D2/136-321      OS Macaca mulatta
#=GS F6Y1D2/136-321      DE Uncharacterized protein
#=GS F6Y1D2/136-321      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A452SCR7/148-305  AC A0A452SCR7
#=GS A0A452SCR7/148-305  OS Ursus americanus
#=GS A0A452SCR7/148-305  DE Mitochondrial rRNA methyltransferase 1
#=GS A0A452SCR7/148-305  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus americanus; 
#=GS G1QPE0/136-322      AC G1QPE0
#=GS G1QPE0/136-322      OS Nomascus leucogenys
#=GS G1QPE0/136-322      DE Uncharacterized protein
#=GS G1QPE0/136-322      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS H2R9M4/136-323      AC H2R9M4
#=GS H2R9M4/136-323      OS Pan troglodytes
#=GS H2R9M4/136-323      DE MRM1 isoform 1
#=GS H2R9M4/136-323      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2R9CQK1/132-319  AC A0A2R9CQK1
#=GS A0A2R9CQK1/132-319  OS Pan paniscus
#=GS A0A2R9CQK1/132-319  DE Uncharacterized protein
#=GS A0A2R9CQK1/132-319  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS A0A2Y9K8A8/150-307  AC A0A2Y9K8A8
#=GS A0A2Y9K8A8/150-307  OS Enhydra lutris kenyoni
#=GS A0A2Y9K8A8/150-307  DE rRNA methyltransferase 1, mitochondrial isoform X2
#=GS A0A2Y9K8A8/150-307  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Lutrinae; Enhydra; Enhydra lutris; Enhydra lutris kenyoni; 
#=GF SQ 24
Q6IN84/136-322              ---------EASPGDDP--QQLWLVLDGIQDPRNFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLESLNVSVAAGILLHSICSQRKGFPTEGERR--QLLQD----------------
Q99J25/130-318              -----DEAADTSSGDDP--QQLWLVLEGLQDPRNLGAVMRSAHFLGVDRVITSQRNSCPLTPVVSKASAGAMEVMDVFATPDLPGFLQAKAQQGWLVVGTVGCPGPEISQSSKVPITSCLEFVWDRPTLLVLGSEGSGLSQEVFASCQLLLTILPRRHLPPGLESLNVSVATGILLHSICSQKKGFPVQ-ERG--QLLQ-----------------
W5MC38/144-313              --------------RDSAGPPLWLVLDGIQDPMNLGAILRSAYFLGVDRIASSLRNSCPLTPVVSKASSGAMEVLEVYGYDSLADVLKAKLSRGWHVVGTVGAAEADMG----IPVLSCSEFQQTKPTLLVLGSEGDGLTPELRALCQAHLTIAPRRDLHPGVESLNVSVAAGILLHSLISSRRKERC----------------------------
H9G6C9/138-317              TQAPAHRLEGATTEEAP--QLLWLALEGIQDPMNLGAVLRSAHFLGVDGIVMSRKNSCPLTPVVSKASSGAMEVLDVFSADDLPGFLKVKSKEGWEVLGTVA----HAKAQDGIPVVSCLDFRWMKPTILVLGNEGHGLSPETKSLCRRMLTIAPGRELEPGIESLNVSVAAGILLHSICAQKVKA------------------------------
F7DZ27/207-407              -----------EPREDPASRRLWLILEEIQDPRNLGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKASAGTMEVMDVFATDDLPGLLKVKAQQGWLVAGTVGCPGSVVPQCSDIPITSCLEFLWDRSTLLVLGNEGSGLSHEIRNLCHILLTILPGRELPPEVESLNVSVAAGILLHSIISQRKGQDSLLKEETRAVLCDSLEPSAASEELD----
A7MBD2/142-344              --------EVARPGDDP--QQLWLVLEGLQDPRNLGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQARARQGWLVAGTVGCPGPEIALSSKIPVTRCLDFLWDRPTLLVLGNEGSGLSRAVQASCQLLLTILPGRQLPPGLESLNVSVAAGILLHSICSQRKGFPVERRRE--QLLHDPQDPSASSEAARVAQ-
G1LNU9/143-332              ---------EARPGDDP--QQLWLVLERIQDPRNLGALLRSAHFLGVDKIITSGRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKAREGWLVAGTVGCPGPEISPSSEIPITSCLEFLWDRPTLLVLGNEGSGLSQAVQASCQLLLTILPGRQLPPGLESLNVSVAAGILLHSICSQRKGFPVEGKRE--HLLQDPQE-------------
F6SV11/136-324              -------SREARPGDDP--QQLWLILEGLQDPRNLGAVLRSAYFLGVDKVITSRRNSCPLTPVVSKASAGAVEVMDVFSTDDLAGFLQVKARQGWLVAGTVGCPGPETSLSSEMPITSCLEFVWDQPTLLVLGNEGSGLSQEVQASCQVLLTILPGRQLPPGLESLNVSVATGILLHSICSQRKAFPAEQKRG--KLLQD----------------
F1S1B8/148-310              --------------DDP--QQLWLVLEGLQDPRNLGAVLRSAHFLGVEKVITSRKNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKARQGWLVAGTVGCPGPEISPSSEVPITSCLDFLWDQPTLLVLGNEGSGLSREVQASCQLLLTILPGRQLPPGLESLNVSVAAAL---------------GGRE--C--------------------
M3X736/142-335              --------GEARPGDDP--RQLWLVLEGLQDPRNLGGVLRSAHFLGVDKVITSGRNSCPLTPVVSKASAGAMEVMDLFSTDDLAGFLQARAREGWLVAGTVGCLGPEISSFSEIPVTSCLEFLWDRPTVLVLGNEGSGLSKGVQASCQLLLTILPGRQLPSGLDSLNVSVAAGILLHSICSQRKGFSAE-KRE--QLL-DPQGTSATS--------
M3YUE2/138-336              ----WTEVEEARPGDDP--QQLWLVLERLQDPRNLGSVLRSAHFLGVDKVITTGRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKSRQGWLVAGTVSCPGPEISPSSDIPITSCLEFLWDRPTLLVLGNEGSGLSLAVQASCQLLLTILPGRQLPPGLESLNVSVAAGILLHSICSQRKGSSGERKRE--HLLQDPREPSTT---------
E2RN23/133-325              ----WTEVEEARPGDDP--RRLWLVLERLQDPRNLGAVLRSAHFLGVDKVITSGRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKARQGWLVAGTVGCPRPEM--SSEIPITSCLEFLWDQPTLLVLGNEGSGLSQAVQASCQLLLTILPGRQLPPGLESLNVSVAAGILLHSICCQRKDFPMGRKRE--HLLQDPRE-------------
W5QB91/141-345              -------AEAARPGDDP--QQLWLVLEGLQDPRNLGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQARARQGWLVAGTVGCPGPEIAPSSKIPITRCLDFLWDRPTLLVLGNEGSGLSRAVQASCQLLLTILPGRQLPPGLESLNVSVAAGILLHSICSQRKGFPVEGRRE--QLLHDPQDPSASSEAARAAQH
A0A2Y9K1Z5/146-337          ----------ARPGDDP--QQLWLVLERLQDPRNLGSVLRSAHFLGVDKVITTGRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKSRQGWLVAGTVSCPGPEISPSSDIPITSCLEFLWDRPTLLVLGNEGSGLSLAVQASCQLLLTILPGRQLPPGLESLNVSVAAGILLHSICSQRKGSPGEGKRE--HLLQDPREPST----------
A0A3Q7SA66/138-329          ----WTEVEEARPGDDP--RRLWLVLERLQDPRNLGAVLRSAHFLGVDKVITSGRNSCPLTPVVSKASAGAMEVMDVFSTEDLAGFLQAKAQQGWLVAGTVGCPRPEMSPSSEIPITSCLEFLWDQPTLLVLGNEGSGLSQAVQASCQLLLTILPGRQLPPGLESLNVSVAAGILLHSICCQRKDFPMGRKRE--HLLQD----------------
A0A3Q7Y6F9/148-306          --------------DDP--QQLWLVLERIQDPRNFGAVLRSAHFLGVDKVITSGRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKAREGWLVAGTVGCPGPEISPSSEIPITSCLEFLWDRPTLLVLGNEGSGLSLAVQASCQLLLTILPGRQLPPGLESLNVSVAAVRG-----------------------------------------
A0A452DXF3/141-344          -------AEAARPGDDP--QQLWLVLEGLQDPRNLGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQARARQGWLVAGTVGCPGPEIAPSSKIPITRCLDFLWDRPTLLVLGNEGSGLSRAVQASCQLLLTILPGRQLPPGLESLNVSVAAGILLHSICSQRK-FPVEGRRE--QLLHDPQDPSASSEAARAAQH
D3ZK81/130-317              -----DEAADTSSGDDP--QQLWLVLEGIQDPRNLGAVMRSAYFLGVDRVITSRRNSCPLTPVVSKASAGAMEVMDVFASPDLASFLQAKAQQGWLVVGTVGCPGPEISQSSKVPVTSCLEFIWDRPTLLVLGNEGSGLSQGVFATCQLLLTILPGRHLPPGLESLNVSVATGILLHSICSQKKGFPVQ-ERG--QRL------------------
F6Y1D2/136-321              ---------EASPGDDP--QQLWLVLEGIQDPRNFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKASAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPRAEDPQSSEIPITSCLEFPWDRPTLLVLGNEGSGLSQEVQASCQVLLTILPRRQLPPGLESLNVSVAAGILLHSICSQWKGFPTEGERR--QFLQ-----------------
A0A452SCR7/148-305          --------------DDP--QQLWLVLERIQDPRNFGAVLRSAHFLGVDKVITSGRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKAREGWLVAGTVGCPGPEISPSSEIPITSCLEFLWDRPTLLVLGNEGSGLSLAVQASCQLLLTILPGRQLPPGLESLNVSVAAGE------------------------------------------
G1QPE0/136-322              ---------EASPGDDP--QQLWLVLDGIQDPRNFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSAEDPQSSEIPITSCLEFLWDRPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLESLNVSVAAGILLHSICNQRKGFPTEGERR--QLLQD----------------
H2R9M4/136-323              ---------EASPGDDP--QQLWLVLDGIQDPRNFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLESLNVSVAAGILLHSICSQRKGFPTEGERR--QLLQDP---------------
A0A2R9CQK1/132-319          ---------EASPGDDP--QQLWLVLDGIQDPRNFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLESLNVSVAAGILLHSICSQRKGFPTEGERR--QLLQDP---------------
A0A2Y9K8A8/150-307          --------------DDP--QQLWLVLERLQDPRNLGSVLRSAHFLGVDKVITTGRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKSRQGWLVAGTVSCPGPEISPSSDIPITSCLEFLWDRPTLLVLGNEGSGLSLAVQASCQLLLTILPGRQLPPGLESLNVSVAAAR------------------------------------------
#=GC scorecons              000000001232337880066999797569997979788999899998777775899999999999797988997888767896779768656996969997665564435647976797795766897999979979984576769767999796969788789999999776555554454433322124200223221000000000000000
#=GC scorecons_70           ______________***__*_******_*************************_*************************************_************__*____*_*********_*****************__*_*_**_*************************__________________________________________
#=GC scorecons_80           ______________***____******__***_*_*************_****_************************__***_****_*___**_*_***____________***_*****_*__**************____*_**_******_*_*_*************___________________________________________
#=GC scorecons_90           ________________*____***_*___***_*_*_*****_*****______************_*_*****_***___**___*______**_*_***_____________*___*__*____**_****_**_***______*___***_*_*_*_**_********_____________________________________________
//