# STOCKHOLM 1.0
#=GF ID 3.30.70.3540/FF/000003
#=GF DE Replicase polyprotein 1ab
#=GF AC 3.30.70.3540/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 8.605
#=GS P0C6X8/4059-4153  AC P0C6X8
#=GS P0C6X8/4059-4153  OS Murine hepatitis virus strain 2
#=GS P0C6X8/4059-4153  DE Replicase polyprotein 1ab
#=GS P0C6X8/4059-4153  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6X8/4059-4153  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6V1/4117-4211  AC P0C6V1
#=GS P0C6V1/4117-4211  OS Murine hepatitis virus strain JHM
#=GS P0C6V1/4117-4211  DE Replicase polyprotein 1a
#=GS P0C6V1/4117-4211  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6V1/4117-4211  DR GO; GO:0004197; GO:0097264; 
#=GS P0C6V1/4117-4211  DR EC; 3.4.19.12; 3.4.22.69; 
#=GS P0C6V0/4111-4205  AC P0C6V0
#=GS P0C6V0/4111-4205  OS Murine hepatitis virus strain A59
#=GS P0C6V0/4111-4205  DE Replicase polyprotein 1a
#=GS P0C6V0/4111-4205  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6V0/4111-4205  DR GO; GO:0097264; 
#=GS P0C6V0/4111-4205  DR EC; 3.4.19.12; 3.4.22.69; 
#=GS P0C6Y0/4117-4211  AC P0C6Y0
#=GS P0C6Y0/4117-4211  OS Murine hepatitis virus strain JHM
#=GS P0C6Y0/4117-4211  DE Replicase polyprotein 1ab
#=GS P0C6Y0/4117-4211  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6Y0/4117-4211  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6X9/4111-4205  AC P0C6X9
#=GS P0C6X9/4111-4205  OS Murine hepatitis virus strain A59
#=GS P0C6X9/4111-4205  DE Replicase polyprotein 1ab
#=GS P0C6X9/4111-4205  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6X9/4111-4205  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6U9/4059-4153  AC P0C6U9
#=GS P0C6U9/4059-4153  OS Murine hepatitis virus strain 2
#=GS P0C6U9/4059-4153  DE Replicase polyprotein 1a
#=GS P0C6U9/4059-4153  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6U9/4059-4153  DR EC; 3.4.19.12; 3.4.22.69; 
#=GS I7AWB5/4116-4210  AC I7AWB5
#=GS I7AWB5/4116-4210  OS Murine coronavirus
#=GS I7AWB5/4116-4210  DE Polyprotein ORF1ab
#=GS I7AWB5/4116-4210  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C6GHR8/4107-4201  AC C6GHR8
#=GS C6GHR8/4107-4201  OS Rat coronavirus Parker
#=GS C6GHR8/4107-4201  DE Orf1ab polyprotein
#=GS C6GHR8/4107-4201  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C6GHR9/4107-4201  AC C6GHR9
#=GS C6GHR9/4107-4201  OS Rat coronavirus Parker
#=GS C6GHR9/4107-4201  DE Orf1a polyprotein
#=GS C6GHR9/4107-4201  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS Q9J3E9/4110-4204  AC Q9J3E9
#=GS Q9J3E9/4110-4204  OS Murine hepatitis virus
#=GS Q9J3E9/4110-4204  DE RNA-directed RNA polymerase
#=GS Q9J3E9/4110-4204  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C0KYT7/4113-4207  AC C0KYT7
#=GS C0KYT7/4113-4207  OS Murine coronavirus repA59/RJHM
#=GS C0KYT7/4113-4207  DE ORF1a polyprotein
#=GS C0KYT7/4113-4207  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C0KYQ8/4113-4207  AC C0KYQ8
#=GS C0KYQ8/4113-4207  OS Murine coronavirus RA59/R13
#=GS C0KYQ8/4113-4207  DE ORF1a polyprotein
#=GS C0KYQ8/4113-4207  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C0KYS8/4113-4207  AC C0KYS8
#=GS C0KYS8/4113-4207  OS Murine coronavirus RA59/SJHM
#=GS C0KYS8/4113-4207  DE ORF1a polyprotein
#=GS C0KYS8/4113-4207  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS I7B5F2/4116-4210  AC I7B5F2
#=GS I7B5F2/4116-4210  OS Murine coronavirus
#=GS I7B5F2/4116-4210  DE Polyprotein ORF1a
#=GS I7B5F2/4116-4210  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GF SQ 14
P0C6X8/4059-4153          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVNITWPLVIAANRHNEVSSVV
P0C6V1/4117-4211          NQALNSILDNAVKGCVPLNAIPPLTSNTLTIIVPDKQVFDQVVDNVYVTYAPNVWHIQSIQDADGAVKQLNEIDVNSTWPLVISANRHNEVSTVV
P0C6V0/4111-4205          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVNSTWPLVIAANRHNEVSTVV
P0C6Y0/4117-4211          NQALNSILDNAVKGCVPLNAIPPLTSNTLTIIVPDKQVFDQVVDNVYVTYAPNVWHIQSIQDADGAVKQLNEIDVNSTWPLVISANRHNEVSTVV
P0C6X9/4111-4205          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVNSTWPLVIAANRHNEVSTVV
P0C6U9/4059-4153          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVNITWPLVIAANRHNEVSSVV
I7AWB5/4116-4210          NQALNSILDNAVKGCVPLNAIPPLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVNSTWPLVISANRHNEVSTVV
C6GHR8/4107-4201          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVNSIWPLVIAANRHNEVSTVV
C6GHR9/4107-4201          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVNSIWPLVIAANRHNEVSTVV
Q9J3E9/4110-4204          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVNSTWPLVIAANRHNEVSTVV
C0KYT7/4113-4207          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVNSTWPLVIAANRHNEVSTVV
C0KYQ8/4113-4207          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVNSTWPLVIAANRHNEVSTVV
C0KYS8/4113-4207          NQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVNSTWPLVIAANRHNEVSTVV
I7B5F2/4116-4210          NQALNSILDNAVKGCVPLNAIPPLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVNSTWPLVISANRHNEVSTVV
#=GC scorecons            99999999999999999999996999999999999999999999999999969999995999999999999999996799999699999999799
#=GC scorecons_70         **********************************************************_************************************
#=GC scorecons_80         **********************_****************************_******_*****************_******_***********
#=GC scorecons_90         **********************_****************************_******_*****************__*****_********_**
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