# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000642
#=GF DE U2 snRNP auxiliary factor large subunit
#=GF AC 3.30.70.330/FF/000642
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.783
#=GS Q9W1T4/111-201_294-315      AC Q9W1T4
#=GS Q9W1T4/111-201_294-315      OS Drosophila melanogaster
#=GS Q9W1T4/111-201_294-315      DE U2 snRNP auxiliary factor large subunit
#=GS Q9W1T4/111-201_294-315      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9W1T4/111-201_294-315      DR GO; GO:0003723; GO:0003729; GO:0005515; GO:0033119; GO:0060968; 
#=GS Q54LV5/268-353_430-451      AC Q54LV5
#=GS Q54LV5/268-353_430-451      OS Dictyostelium discoideum
#=GS Q54LV5/268-353_430-451      DE Uncharacterized protein
#=GS Q54LV5/268-353_430-451      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54LV5/268-353_430-451      DR GO; GO:0000398; GO:0008187; 
#=GS Q8T8Y4/111-201_294-315      AC Q8T8Y4
#=GS Q8T8Y4/111-201_294-315      OS Drosophila melanogaster
#=GS Q8T8Y4/111-201_294-315      DE U2 snRNP auxiliary factor large subunit
#=GS Q8T8Y4/111-201_294-315      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8T8Y4/111-201_294-315      DR GO; GO:0003723; GO:0003729; GO:0005515; GO:0033119; GO:0060968; 
#=GS A7RJT7/6-91_168-189         AC A7RJT7
#=GS A7RJT7/6-91_168-189         OS Nematostella vectensis
#=GS A7RJT7/6-91_168-189         DE U2 snRNP auxiliary factor large subunit
#=GS A7RJT7/6-91_168-189         DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS H6QU19/337-440_508-529      AC H6QU19
#=GS H6QU19/337-440_508-529      OS Puccinia graminis f. sp. tritici CRL 75-36-700-3
#=GS H6QU19/337-440_508-529      DE Uncharacterized protein
#=GS H6QU19/337-440_508-529      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; 
#=GS A0A0D1CHB4/353-456_514-535  AC A0A0D1CHB4
#=GS A0A0D1CHB4/353-456_514-535  OS Ustilago maydis 521
#=GS A0A0D1CHB4/353-456_514-535  DE Chromosome 19, whole genome shotgun sequence
#=GS A0A0D1CHB4/353-456_514-535  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS F0ZQL5/161-246_321-342      AC F0ZQL5
#=GS F0ZQL5/161-246_321-342      OS Dictyostelium purpureum
#=GS F0ZQL5/161-246_321-342      DE U2 snRNP auxiliary factor large subunit
#=GS F0ZQL5/161-246_321-342      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS A0A2B4RGN2/99-184_261-282   AC A0A2B4RGN2
#=GS A0A2B4RGN2/99-184_261-282   OS Stylophora pistillata
#=GS A0A2B4RGN2/99-184_261-282   DE U2 snRNP auxiliary factor large subunit
#=GS A0A2B4RGN2/99-184_261-282   DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora; Stylophora pistillata; 
#=GS F4R5G1/34-136_205-226       AC F4R5G1
#=GS F4R5G1/34-136_205-226       OS Melampsora larici-populina 98AG31
#=GS F4R5G1/34-136_205-226       DE U2 snRNP auxiliary factor large subunit
#=GS F4R5G1/34-136_205-226       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora; Melampsora larici-populina; 
#=GS A0A3M6UG56/74-159_236-257   AC A0A3M6UG56
#=GS A0A3M6UG56/74-159_236-257   OS Pocillopora damicornis
#=GS A0A3M6UG56/74-159_236-257   DE U2 snRNP auxiliary factor large subunit
#=GS A0A3M6UG56/74-159_236-257   DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora; Pocillopora damicornis; 
#=GS V5GMJ3/342-445_503-524      AC V5GMJ3
#=GS V5GMJ3/342-445_503-524      OS Kalmanozyma brasiliensis GHG001
#=GS V5GMJ3/342-445_503-524      DE Uncharacterized protein
#=GS V5GMJ3/342-445_503-524      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; 
#=GS R9P966/349-452_510-531      AC R9P966
#=GS R9P966/349-452_510-531      OS Pseudozyma hubeiensis SY62
#=GS R9P966/349-452_510-531      DE Splicing factor, subunit
#=GS R9P966/349-452_510-531      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; 
#=GS A0A0L0VBA2/325-428_496-517  AC A0A0L0VBA2
#=GS A0A0L0VBA2/325-428_496-517  OS Puccinia striiformis f. sp. tritici PST-78
#=GS A0A0L0VBA2/325-428_496-517  DE Uncharacterized protein
#=GS A0A0L0VBA2/325-428_496-517  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; 
#=GS A0A180H444/291-394_462-483  AC A0A180H444
#=GS A0A180H444/291-394_462-483  OS Puccinia triticina 1-1 BBBD Race 1
#=GS A0A180H444/291-394_462-483  DE Uncharacterized protein
#=GS A0A180H444/291-394_462-483  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia triticina; 
#=GS A0A0L6VLW1/363-466_534-555  AC A0A0L6VLW1
#=GS A0A0L6VLW1/363-466_534-555  OS Puccinia sorghi
#=GS A0A0L6VLW1/363-466_534-555  DE Uncharacterized protein
#=GS A0A0L6VLW1/363-466_534-555  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia sorghi; 
#=GS A0A2N5S6I5/330-433_501-522  AC A0A2N5S6I5
#=GS A0A2N5S6I5/330-433_501-522  OS Puccinia coronata var. avenae f. sp. avenae
#=GS A0A2N5S6I5/330-433_501-522  DE Uncharacterized protein
#=GS A0A2N5S6I5/330-433_501-522  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia coronata; Puccinia coronata var. avenae; 
#=GS B4I8I1/107-197_290-311      AC B4I8I1
#=GS B4I8I1/107-197_290-311      OS Drosophila sechellia
#=GS B4I8I1/107-197_290-311      DE U2 snRNP auxiliary factor large subunit
#=GS B4I8I1/107-197_290-311      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4QI74/107-197_290-311      AC B4QI74
#=GS B4QI74/107-197_290-311      OS Drosophila simulans
#=GS B4QI74/107-197_290-311      DE U2 snRNP auxiliary factor large subunit
#=GS B4QI74/107-197_290-311      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A0A2S4VK24/303-406_474-495  AC A0A2S4VK24
#=GS A0A2S4VK24/303-406_474-495  OS Puccinia striiformis
#=GS A0A2S4VK24/303-406_474-495  DE Uncharacterized protein
#=GS A0A2S4VK24/303-406_474-495  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; 
#=GF SQ 19
Q9W1T4/111-201_294-315              RRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSH-----YMDGNAVLTCQTNLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDY------------------QPSVTDHAIAGLHGMLLGDRRLVV
Q54LV5/268-353_430-451              RRIYVGNIPPGISDSELMEFFNAAVLAANLNTKPGP----------PVVFCQINAPKCFAFIEFRSPEEATNAMRFDGISLKNFTLKIRRPKDY------------------QSEVTDVACSKLNGIPLADKTLVV
Q8T8Y4/111-201_294-315              RRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSH-----YMDGNAVLTCQTNLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDY------------------QPSVTDHAIAGLHGMLLGDRRLVV
A7RJT7/6-91_168-189                 RRLYVGNIPFGVTENLMIEFFNAKMKEAKLNTAPGN----------PVIAAQINTEQNFAFIELRSVEETTQAMAFDGIILQGQALKIRRPKDY------------------QPGITDVAIQGLNGMQLGDKKLIV
H6QU19/337-440_508-529              RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV
A0A0D1CHB4/353-456_514-535          RRLYVGNITHQANEQNIVAFFNEQMLKLKLGTEPGE----------PAVSAQVNVDKGYAFVEFRHPEEATNAMSFDGIVFQAQSLKIRRPKDYTGPDIRPPSNIHVPGVISTNALTDLACQGLNGMELGDRNLVV
F0ZQL5/161-246_321-342              RRIYVGNIPPGITDSELIEFFNAAVLAANLNVKPGP----------PVVFCQINAPKCFAFIEFRTPEEATNAMRFDGITLKNYTLKIRRPKDY------------------QQDVTDQACASLNGISLADKNLIV
A0A2B4RGN2/99-184_261-282           RRLYVGNIPFGITENLMIEFFNAKMQEAKLNTAPGN----------PVIAAQINLEQNFAFIELRSVEETTQAMAFDGIILEGQSLKIRRPKDY------------------QPTITDVAITGLNGMQLGEKKLIV
F4R5G1/34-136_205-226               RRLYVGNILHTANEMNVAEFFNAKMKELGLLVRNGEDGSMISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGTEHTS-----------TNDLTDIACQGLNGMELGDRYLVV
A0A3M6UG56/74-159_236-257           RRLYVGNIPFGITENLMIEFFNAKMQEAKLNTAPGN----------PVIAAQINLEQNFAFIELRSVEETTQAMAFDGIILEGQSLKIRRPKDY------------------QPNITDVAITGLNGMQLGEKKLIV
V5GMJ3/342-445_503-524              RRLYVGNITHQTTEPNIIAFFNEQMHKLQLGTEPGD----------PAVSAQVNVDKGYAFVEFRHPEEATNAMSFDGIVFQSQSLKIRRPKDYTGPDVRPPLSIHVPGVISTNALTDLACQGLNGMELGERNLVV
R9P966/349-452_510-531              RRLYVGNITHQTNEQNIVAFFNEQMLKLKLGTEAGE----------PAVSAQVNVDKGYAFVEFRHPEEATNAMSFDGIVFQAQSLKIRRPKDYTGPDIRPPSNIHVPGVISTNALTDLACQGLNGMELGDRNLVV
A0A0L0VBA2/325-428_496-517          RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV
A0A180H444/291-394_462-483          RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV
A0A0L6VLW1/363-466_534-555          RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV
A0A2N5S6I5/330-433_501-522          RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV
B4I8I1/107-197_290-311              RRLYVGNIPFGVTEEEMMQFFNHRIMAQGYEAKSSH-----YMDGKAVLTCQTHLEKNFAFLEFRSIDEATQALNFDGMVYRGQTLKIRRPHDY------------------QPLVTDHAIAGLHGMLLGDRRLVV
B4QI74/107-197_290-311              RRLYVGNIPFGVTEEEMMQFFNHRITALGYEAKSSH-----YMDGKAVLTCQTNLEKNFAFLEFRSIDEATQALNFDGMVFRGQTLKIRRPHDY------------------QPLVTDHAIAGLHGMLLGDRRLVV
A0A2S4VK24/303-406_474-495          RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV
#=GC scorecons                      9979999955455734545999456345463544540000011111776449583675799697944797756749997665575999999799221111110000000000543699495479798497773979
#=GC scorecons_70                   ********_____*_____***__*____*________________***__*_*_**_***_***__****_**_****_*__*_*********______________________**_*__*****_****_***
#=GC scorecons_80                   ********_____*_____***_________________________*___*_*__*_***_***__****__*_****____*_******_**______________________**_*__**_**_****_***
#=GC scorecons_90                   **_*****___________***_____________________________*_*_____**_*_*___*______***_______******_**______________________**_*___*_*__*____*_*
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