# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000642 #=GF DE U2 snRNP auxiliary factor large subunit #=GF AC 3.30.70.330/FF/000642 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 76.783 #=GS Q9W1T4/111-201_294-315 AC Q9W1T4 #=GS Q9W1T4/111-201_294-315 OS Drosophila melanogaster #=GS Q9W1T4/111-201_294-315 DE U2 snRNP auxiliary factor large subunit #=GS Q9W1T4/111-201_294-315 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q9W1T4/111-201_294-315 DR GO; GO:0003723; GO:0003729; GO:0005515; GO:0033119; GO:0060968; #=GS Q54LV5/268-353_430-451 AC Q54LV5 #=GS Q54LV5/268-353_430-451 OS Dictyostelium discoideum #=GS Q54LV5/268-353_430-451 DE Uncharacterized protein #=GS Q54LV5/268-353_430-451 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; #=GS Q54LV5/268-353_430-451 DR GO; GO:0000398; GO:0008187; #=GS Q8T8Y4/111-201_294-315 AC Q8T8Y4 #=GS Q8T8Y4/111-201_294-315 OS Drosophila melanogaster #=GS Q8T8Y4/111-201_294-315 DE U2 snRNP auxiliary factor large subunit #=GS Q8T8Y4/111-201_294-315 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q8T8Y4/111-201_294-315 DR GO; GO:0003723; GO:0003729; GO:0005515; GO:0033119; GO:0060968; #=GS A7RJT7/6-91_168-189 AC A7RJT7 #=GS A7RJT7/6-91_168-189 OS Nematostella vectensis #=GS A7RJT7/6-91_168-189 DE U2 snRNP auxiliary factor large subunit #=GS A7RJT7/6-91_168-189 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS H6QU19/337-440_508-529 AC H6QU19 #=GS H6QU19/337-440_508-529 OS Puccinia graminis f. sp. tritici CRL 75-36-700-3 #=GS H6QU19/337-440_508-529 DE Uncharacterized protein #=GS H6QU19/337-440_508-529 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; #=GS A0A0D1CHB4/353-456_514-535 AC A0A0D1CHB4 #=GS A0A0D1CHB4/353-456_514-535 OS Ustilago maydis 521 #=GS A0A0D1CHB4/353-456_514-535 DE Chromosome 19, whole genome shotgun sequence #=GS A0A0D1CHB4/353-456_514-535 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; #=GS F0ZQL5/161-246_321-342 AC F0ZQL5 #=GS F0ZQL5/161-246_321-342 OS Dictyostelium purpureum #=GS F0ZQL5/161-246_321-342 DE U2 snRNP auxiliary factor large subunit #=GS F0ZQL5/161-246_321-342 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; #=GS A0A2B4RGN2/99-184_261-282 AC A0A2B4RGN2 #=GS A0A2B4RGN2/99-184_261-282 OS Stylophora pistillata #=GS A0A2B4RGN2/99-184_261-282 DE U2 snRNP auxiliary factor large subunit #=GS A0A2B4RGN2/99-184_261-282 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora; Stylophora pistillata; #=GS F4R5G1/34-136_205-226 AC F4R5G1 #=GS F4R5G1/34-136_205-226 OS Melampsora larici-populina 98AG31 #=GS F4R5G1/34-136_205-226 DE U2 snRNP auxiliary factor large subunit #=GS F4R5G1/34-136_205-226 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora; Melampsora larici-populina; #=GS A0A3M6UG56/74-159_236-257 AC A0A3M6UG56 #=GS A0A3M6UG56/74-159_236-257 OS Pocillopora damicornis #=GS A0A3M6UG56/74-159_236-257 DE U2 snRNP auxiliary factor large subunit #=GS A0A3M6UG56/74-159_236-257 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora; Pocillopora damicornis; #=GS V5GMJ3/342-445_503-524 AC V5GMJ3 #=GS V5GMJ3/342-445_503-524 OS Kalmanozyma brasiliensis GHG001 #=GS V5GMJ3/342-445_503-524 DE Uncharacterized protein #=GS V5GMJ3/342-445_503-524 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; #=GS R9P966/349-452_510-531 AC R9P966 #=GS R9P966/349-452_510-531 OS Pseudozyma hubeiensis SY62 #=GS R9P966/349-452_510-531 DE Splicing factor, subunit #=GS R9P966/349-452_510-531 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; #=GS A0A0L0VBA2/325-428_496-517 AC A0A0L0VBA2 #=GS A0A0L0VBA2/325-428_496-517 OS Puccinia striiformis f. sp. tritici PST-78 #=GS A0A0L0VBA2/325-428_496-517 DE Uncharacterized protein #=GS A0A0L0VBA2/325-428_496-517 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; #=GS A0A180H444/291-394_462-483 AC A0A180H444 #=GS A0A180H444/291-394_462-483 OS Puccinia triticina 1-1 BBBD Race 1 #=GS A0A180H444/291-394_462-483 DE Uncharacterized protein #=GS A0A180H444/291-394_462-483 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia triticina; #=GS A0A0L6VLW1/363-466_534-555 AC A0A0L6VLW1 #=GS A0A0L6VLW1/363-466_534-555 OS Puccinia sorghi #=GS A0A0L6VLW1/363-466_534-555 DE Uncharacterized protein #=GS A0A0L6VLW1/363-466_534-555 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia sorghi; #=GS A0A2N5S6I5/330-433_501-522 AC A0A2N5S6I5 #=GS A0A2N5S6I5/330-433_501-522 OS Puccinia coronata var. avenae f. sp. avenae #=GS A0A2N5S6I5/330-433_501-522 DE Uncharacterized protein #=GS A0A2N5S6I5/330-433_501-522 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia coronata; Puccinia coronata var. avenae; #=GS B4I8I1/107-197_290-311 AC B4I8I1 #=GS B4I8I1/107-197_290-311 OS Drosophila sechellia #=GS B4I8I1/107-197_290-311 DE U2 snRNP auxiliary factor large subunit #=GS B4I8I1/107-197_290-311 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS B4QI74/107-197_290-311 AC B4QI74 #=GS B4QI74/107-197_290-311 OS Drosophila simulans #=GS B4QI74/107-197_290-311 DE U2 snRNP auxiliary factor large subunit #=GS B4QI74/107-197_290-311 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS A0A2S4VK24/303-406_474-495 AC A0A2S4VK24 #=GS A0A2S4VK24/303-406_474-495 OS Puccinia striiformis #=GS A0A2S4VK24/303-406_474-495 DE Uncharacterized protein #=GS A0A2S4VK24/303-406_474-495 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; #=GF SQ 19 Q9W1T4/111-201_294-315 RRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSH-----YMDGNAVLTCQTNLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDY------------------QPSVTDHAIAGLHGMLLGDRRLVV Q54LV5/268-353_430-451 RRIYVGNIPPGISDSELMEFFNAAVLAANLNTKPGP----------PVVFCQINAPKCFAFIEFRSPEEATNAMRFDGISLKNFTLKIRRPKDY------------------QSEVTDVACSKLNGIPLADKTLVV Q8T8Y4/111-201_294-315 RRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSH-----YMDGNAVLTCQTNLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDY------------------QPSVTDHAIAGLHGMLLGDRRLVV A7RJT7/6-91_168-189 RRLYVGNIPFGVTENLMIEFFNAKMKEAKLNTAPGN----------PVIAAQINTEQNFAFIELRSVEETTQAMAFDGIILQGQALKIRRPKDY------------------QPGITDVAIQGLNGMQLGDKKLIV H6QU19/337-440_508-529 RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV A0A0D1CHB4/353-456_514-535 RRLYVGNITHQANEQNIVAFFNEQMLKLKLGTEPGE----------PAVSAQVNVDKGYAFVEFRHPEEATNAMSFDGIVFQAQSLKIRRPKDYTGPDIRPPSNIHVPGVISTNALTDLACQGLNGMELGDRNLVV F0ZQL5/161-246_321-342 RRIYVGNIPPGITDSELIEFFNAAVLAANLNVKPGP----------PVVFCQINAPKCFAFIEFRTPEEATNAMRFDGITLKNYTLKIRRPKDY------------------QQDVTDQACASLNGISLADKNLIV A0A2B4RGN2/99-184_261-282 RRLYVGNIPFGITENLMIEFFNAKMQEAKLNTAPGN----------PVIAAQINLEQNFAFIELRSVEETTQAMAFDGIILEGQSLKIRRPKDY------------------QPTITDVAITGLNGMQLGEKKLIV F4R5G1/34-136_205-226 RRLYVGNILHTANEMNVAEFFNAKMKELGLLVRNGEDGSMISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGTEHTS-----------TNDLTDIACQGLNGMELGDRYLVV A0A3M6UG56/74-159_236-257 RRLYVGNIPFGITENLMIEFFNAKMQEAKLNTAPGN----------PVIAAQINLEQNFAFIELRSVEETTQAMAFDGIILEGQSLKIRRPKDY------------------QPNITDVAITGLNGMQLGEKKLIV V5GMJ3/342-445_503-524 RRLYVGNITHQTTEPNIIAFFNEQMHKLQLGTEPGD----------PAVSAQVNVDKGYAFVEFRHPEEATNAMSFDGIVFQSQSLKIRRPKDYTGPDVRPPLSIHVPGVISTNALTDLACQGLNGMELGERNLVV R9P966/349-452_510-531 RRLYVGNITHQTNEQNIVAFFNEQMLKLKLGTEAGE----------PAVSAQVNVDKGYAFVEFRHPEEATNAMSFDGIVFQAQSLKIRRPKDYTGPDIRPPSNIHVPGVISTNALTDLACQGLNGMELGDRNLVV A0A0L0VBA2/325-428_496-517 RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV A0A180H444/291-394_462-483 RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV A0A0L6VLW1/363-466_534-555 RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV A0A2N5S6I5/330-433_501-522 RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV B4I8I1/107-197_290-311 RRLYVGNIPFGVTEEEMMQFFNHRIMAQGYEAKSSH-----YMDGKAVLTCQTHLEKNFAFLEFRSIDEATQALNFDGMVYRGQTLKIRRPHDY------------------QPLVTDHAIAGLHGMLLGDRRLVV B4QI74/107-197_290-311 RRLYVGNIPFGVTEEEMMQFFNHRITALGYEAKSSH-----YMDGKAVLTCQTNLEKNFAFLEFRSIDEATQALNFDGMVFRGQTLKIRRPHDY------------------QPLVTDHAIAGLHGMLLGDRRLVV A0A2S4VK24/303-406_474-495 RRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGPDHAGP----------THDLTDIACQGLNGMELGDRYLVV #=GC scorecons 9979999955455734545999456345463544540000011111776449583675799697944797756749997665575999999799221111110000000000543699495479798497773979 #=GC scorecons_70 ********_____*_____***__*____*________________***__*_*_**_***_***__****_**_****_*__*_*********______________________**_*__*****_****_*** #=GC scorecons_80 ********_____*_____***_________________________*___*_*__*_***_***__****__*_****____*_******_**______________________**_*__**_**_****_*** #=GC scorecons_90 **_*****___________***_____________________________*_*_____**_*_*___*______***_______******_**______________________**_*___*_*__*____*_* //