# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000584 #=GF DE Splicing factor CC1-like #=GF AC 3.30.70.330/FF/000584 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 58.489 #=GS D7SWA2/62-218 AC D7SWA2 #=GS D7SWA2/62-218 OS Vitis vinifera #=GS D7SWA2/62-218 DE Uncharacterized protein #=GS D7SWA2/62-218 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS B4FWC4/87-251 AC B4FWC4 #=GS B4FWC4/87-251 OS Zea mays #=GS B4FWC4/87-251 DE Splicing factor CC1-like #=GS B4FWC4/87-251 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS I1KBE2/110-270 AC I1KBE2 #=GS I1KBE2/110-270 OS Glycine max #=GS I1KBE2/110-270 DE Uncharacterized protein #=GS I1KBE2/110-270 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A385JI07/161-313 AC A0A385JI07 #=GS A0A385JI07/161-313 OS Populus tomentosa #=GS A0A385JI07/161-313 DE CC1-like, splicing factor #=GS A0A385JI07/161-313 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus tomentosa; #=GS I1H9L7/111-263 AC I1H9L7 #=GS I1H9L7/111-263 OS Brachypodium distachyon #=GS I1H9L7/111-263 DE Uncharacterized protein #=GS I1H9L7/111-263 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A3Q0EMT3/122-283 AC A0A3Q0EMT3 #=GS A0A3Q0EMT3/122-283 OS Vigna radiata var. radiata #=GS A0A3Q0EMT3/122-283 DE RNA-binding protein 39 isoform X2 #=GS A0A3Q0EMT3/122-283 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; #=GS A0A151TQP5/107-270 AC A0A151TQP5 #=GS A0A151TQP5/107-270 OS Cajanus cajan #=GS A0A151TQP5/107-270 DE RNA-binding protein 39 #=GS A0A151TQP5/107-270 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; #=GS B9H1K1/161-313 AC B9H1K1 #=GS B9H1K1/161-313 OS Populus trichocarpa #=GS B9H1K1/161-313 DE Uncharacterized protein #=GS B9H1K1/161-313 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A3L6TQP3/91-246 AC A0A3L6TQP3 #=GS A0A3L6TQP3/91-246 OS Panicum miliaceum #=GS A0A3L6TQP3/91-246 DE Uncharacterized protein #=GS A0A3L6TQP3/91-246 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS A0A0S3RF68/119-278 AC A0A0S3RF68 #=GS A0A0S3RF68/119-278 OS Vigna angularis var. angularis #=GS A0A0S3RF68/119-278 DE Uncharacterized protein #=GS A0A0S3RF68/119-278 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; Vigna angularis var. angularis; #=GS A0A445K9X4/110-270 AC A0A445K9X4 #=GS A0A445K9X4/110-270 OS Glycine soja #=GS A0A445K9X4/110-270 DE Putative RNA-binding protein 23 isoform A #=GS A0A445K9X4/110-270 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS A0A0L9UEY2/119-278 AC A0A0L9UEY2 #=GS A0A0L9UEY2/119-278 OS Vigna angularis #=GS A0A0L9UEY2/119-278 DE Uncharacterized protein #=GS A0A0L9UEY2/119-278 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; #=GS A0A1D6GQ71/98-251 AC A0A1D6GQ71 #=GS A0A1D6GQ71/98-251 OS Zea mays #=GS A0A1D6GQ71/98-251 DE Splicing factor CC1-like #=GS A0A1D6GQ71/98-251 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A096R1K6/102-251 AC A0A096R1K6 #=GS A0A096R1K6/102-251 OS Zea mays #=GS A0A096R1K6/102-251 DE Splicing factor CC1-like #=GS A0A096R1K6/102-251 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A3L6DHU8/87-250 AC A0A3L6DHU8 #=GS A0A3L6DHU8/87-250 OS Zea mays #=GS A0A3L6DHU8/87-250 DE RNA-binding protein 39 #=GS A0A3L6DHU8/87-250 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6PK21/87-250 AC A0A1D6PK21 #=GS A0A1D6PK21/87-250 OS Zea mays #=GS A0A1D6PK21/87-250 DE Splicing factor CC1-like #=GS A0A1D6PK21/87-250 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6PK15/90-249 AC A0A1D6PK15 #=GS A0A1D6PK15/90-249 OS Zea mays #=GS A0A1D6PK15/90-249 DE Splicing factor CC1-like #=GS A0A1D6PK15/90-249 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6PK18/90-250 AC A0A1D6PK18 #=GS A0A1D6PK18/90-250 OS Zea mays #=GS A0A1D6PK18/90-250 DE Splicing factor CC1-like #=GS A0A1D6PK18/90-250 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1S3VYK3/122-283 AC A0A1S3VYK3 #=GS A0A1S3VYK3/122-283 OS Vigna radiata var. radiata #=GS A0A1S3VYK3/122-283 DE RNA-binding protein 39 isoform X1 #=GS A0A1S3VYK3/122-283 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; #=GS I1NF91/158-311 AC I1NF91 #=GS I1NF91/158-311 OS Glycine max #=GS I1NF91/158-311 DE Uncharacterized protein #=GS I1NF91/158-311 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A445F381/158-311 AC A0A445F381 #=GS A0A445F381/158-311 OS Glycine soja #=GS A0A445F381/158-311 DE RNA-binding protein 39 isoform A #=GS A0A445F381/158-311 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS K7LLY3/154-308 AC K7LLY3 #=GS K7LLY3/154-308 OS Glycine max #=GS K7LLY3/154-308 DE Uncharacterized protein #=GS K7LLY3/154-308 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GF SQ 22 D7SWA2/62-218 ----------------AKEKER-RELEKEE------REEKERSRRSTSRSRRHESDR---------DRELRERSREIEPRESRRF-KDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSNA-- B4FWC4/87-251 -----------DREGREREKER-GDRHRLR------EREVERERRSRSRSERRRAEEEEMVRELERERE-RSERHHYRDRDVR---RRKDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQ----- I1KBE2/110-270 -----------EKREKEKEKEKERERERRE-------REREREERERSRRSRSRS-----------ERE-RERERDFDTRDSRRF-RDKKEAAEPEADPERDQRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATS A0A385JI07/161-313 ---------------DQDEKDRERSRDREL-------REKDRELREKDRELREK------------ERE-REREPKERDRESRRYKERKEEAVEPEVDPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS---- I1H9L7/111-263 --------------DKEKER-RSRDRDRER------EKEKERERRSRSRSERRRDDD---------ERE-RHRERDYRDRDVR---RRKEDGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ----- A0A3Q0EMT3/122-283 ------------ERERDRDRERERDRDRDR-------RDKEREERERSRRSRSRSER---------ERE-RERERDFDTRDTRRF-RDKKEAAEPEADPERDQRTVFAYQMPLKASERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTS A0A151TQP5/107-270 -------DRDKEREKREKEREKERERERER-------RDREREERERSRRSRSRS-----------ERE-RDRERDFDTRDGRRF-RDKKEAAEPEADPERDQRTVFAYQMPLKASERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTT- B9H1K1/161-313 ---------------DQDEKDRERSRDREL-------REKDRELREKDRELREK------------ERE-REREPKERDRESRRYKERKEEAVEPEVDPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS---- A0A3L6TQP3/91-246 -------------RERDKDKERSRDRDREREKEKERERERDRQRRSRSRSERRRDEE---------ERD-R-----YRDRDVR---RRKEEAAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQ----- A0A0S3RF68/119-278 -------------EKREKERERERDRDRDR-------RDKEREERERSRRSRSRSER---------ERE-RERERDFDTRDTRRY-RDKKEAAEPEADPERDQRTVFAYQMPLKASERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTT- A0A445K9X4/110-270 -----------EKREKEKEKEKERERERRE-------REREREERERSRRSRSRS-----------ERE-RERERDFDTRDSRRF-RDKKEAAEPEADPERDQRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATS A0A0L9UEY2/119-278 -------------EKREKERERERDRDRDR-------RDKEREERERSRRSRSRSER---------ERE-RERERDFDTRDTRRY-RDKKEAAEPEADPERDQRTVFAYQMPLKASERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTT- A0A1D6GQ71/98-251 ------------------------DRHRPR------EREVERERRSLSRSERRRIEEEEMVRELEMERE-RSERHHYRDRDVR---RRKDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQS---- A0A096R1K6/102-251 ----------------------------PR------EREVERERRSLSRSERRRIEEEEMVRELEMERE-RSERHHYRDRDVR---RRKDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQS---- A0A3L6DHU8/87-250 DRDRDVKEKE-QGRENDKDR---RSRDREREKE---EREKDRQRRSRSRSERRRDDE---------ERD-R-----YRERDVR---RRKEEVAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSN--- A0A1D6PK21/87-250 DRDRDVKEKE-QGRENDKDR---RSRDREREKE---EREKDRQRRSRSRSERRRDDE---------ERD-R-----YRERDVR---RRKEEVAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSN--- A0A1D6PK15/90-249 ---RDVKEKE-QGRENDKDR---RSRDREREKE---EREKDRQRRSRSRSERRRDDE---------ERD-R-----YRERDVR---RRKEEVAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQS---- A0A1D6PK18/90-250 ---RDVKEKE-QGRENDKDR---RSRDREREKE---EREKDRQRRSRSRSERRRDDE---------ERD-R-----YRERDVR---RRKEEVAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSN--- A0A1S3VYK3/122-283 ------------ERERDRDRERERDRDRDR-------RDKEREERERSRRSRSRSER---------ERE-RERERDFDTRDTRRF-RDKKEAAEPEADPERDQRTVFAYQMPLKASERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTS I1NF91/158-311 ------SDRL---RTDLDDKDREASRDREY-------RDRER-----SRDKDYK------------DRE-RVRESREHDRENRRHKEKKEETTEP-ADPERDQRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQST--- A0A445F381/158-311 ------SDRL---RTDLDDKDREASRDREY-------RDRER-----SRDKDYK------------DRE-RVRESREHDRENRRHKEKKEETTEP-ADPERDQRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQST--- K7LLY3/154-308 ------SDRH---RTDLDDKDRETSRDREY-------RDIER-----SRDKDYK------------DRG-RVRESRERDRQDRRHKEKKEEATEPEADPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQST--- #=GC scorecons 000000000000032334553325476754000000187579436348944747222000000000797092332245597492106595756997699999998999796699969998899997999999999999999999999999999969999999999986989959999999999999962000 #=GC scorecons_70 _________________________*_*_________**_**__*__**__*_*____________***_*________**_*___*_*_*_****_*************_****_**************************************_************_****_***************____ #=GC scorecons_80 _________________________*_*_________**_**_____**_________________***_*________*__*_____*_*__***_*************__***_**************************************_************_****_**************_____ #=GC scorecons_90 _____________________________________*___*______*__________________*__*________*__*_____*____**__*******_***_*__***_*********_****************************_************_****_**************_____ //