# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000569 #=GF DE ELAV-Type RNA binding-protein family #=GF AC 3.30.70.330/FF/000569 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 78.934 #=GS A8DYR9/235-343 AC A8DYR9 #=GS A8DYR9/235-343 OS Caenorhabditis elegans #=GS A8DYR9/235-343 DE ELAV-Type RNA binding-protein family #=GS A8DYR9/235-343 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A8DYR9/235-343 DR GO; GO:0005634; GO:0008340; #=GS A8DYS3/418-526 AC A8DYS3 #=GS A8DYS3/418-526 OS Caenorhabditis elegans #=GS A8DYS3/418-526 DE ELAV-Type RNA binding-protein family #=GS A8DYS3/418-526 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A8DYS3/418-526 DR GO; GO:0005634; GO:0008340; #=GS A7KQE9/396-504 AC A7KQE9 #=GS A7KQE9/396-504 OS Caenorhabditis elegans #=GS A7KQE9/396-504 DE ELAV-Type RNA binding-protein family #=GS A7KQE9/396-504 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A7KQE9/396-504 DR GO; GO:0005634; GO:0008340; #=GS G5EF03/468-575 AC G5EF03 #=GS G5EF03/468-575 OS Caenorhabditis elegans #=GS G5EF03/468-575 DE ELAV-Type RNA binding-protein family #=GS G5EF03/468-575 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS G5EF03/468-575 DR GO; GO:0005634; GO:0008340; #=GS A8DYS0/472-579 AC A8DYS0 #=GS A8DYS0/472-579 OS Caenorhabditis elegans #=GS A8DYS0/472-579 DE ELAV-Type RNA binding-protein family #=GS A8DYS0/472-579 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A8DYS0/472-579 DR GO; GO:0005634; GO:0008340; #=GS A8DYS1/470-577 AC A8DYS1 #=GS A8DYS1/470-577 OS Caenorhabditis elegans #=GS A8DYS1/470-577 DE ELAV-Type RNA binding-protein family #=GS A8DYS1/470-577 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A8DYS1/470-577 DR GO; GO:0005634; GO:0008340; #=GS A0A0K3ARP5/239-347 AC A0A0K3ARP5 #=GS A0A0K3ARP5/239-347 OS Caenorhabditis elegans #=GS A0A0K3ARP5/239-347 DE ELAV-Type RNA binding-protein family #=GS A0A0K3ARP5/239-347 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3AR42/163-272 AC A0A0K3AR42 #=GS A0A0K3AR42/163-272 OS Caenorhabditis elegans #=GS A0A0K3AR42/163-272 DE ELAV-Type RNA binding-protein family #=GS A0A0K3AR42/163-272 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3AX15/160-269 AC A0A0K3AX15 #=GS A0A0K3AX15/160-269 OS Caenorhabditis elegans #=GS A0A0K3AX15/160-269 DE ELAV-Type RNA binding-protein family #=GS A0A0K3AX15/160-269 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3ARQ0/83-196 AC A0A0K3ARQ0 #=GS A0A0K3ARQ0/83-196 OS Caenorhabditis elegans #=GS A0A0K3ARQ0/83-196 DE ELAV-Type RNA binding-protein family #=GS A0A0K3ARQ0/83-196 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3AR37/305-413 AC A0A0K3AR37 #=GS A0A0K3AR37/305-413 OS Caenorhabditis elegans #=GS A0A0K3AR37/305-413 DE ELAV-Type RNA binding-protein family #=GS A0A0K3AR37/305-413 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3AU17/237-345 AC A0A0K3AU17 #=GS A0A0K3AU17/237-345 OS Caenorhabditis elegans #=GS A0A0K3AU17/237-345 DE ELAV-Type RNA binding-protein family #=GS A0A0K3AU17/237-345 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3AX10/230-338 AC A0A0K3AX10 #=GS A0A0K3AX10/230-338 OS Caenorhabditis elegans #=GS A0A0K3AX10/230-338 DE ELAV-Type RNA binding-protein family #=GS A0A0K3AX10/230-338 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3AUP5/303-411 AC A0A0K3AUP5 #=GS A0A0K3AUP5/303-411 OS Caenorhabditis elegans #=GS A0A0K3AUP5/303-411 DE ELAV-Type RNA binding-protein family #=GS A0A0K3AUP5/303-411 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3AUQ1/162-271 AC A0A0K3AUQ1 #=GS A0A0K3AUQ1/162-271 OS Caenorhabditis elegans #=GS A0A0K3AUQ1/162-271 DE ELAV-Type RNA binding-protein family #=GS A0A0K3AUQ1/162-271 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K3AUP0/473-580 AC A0A0K3AUP0 #=GS A0A0K3AUP0/473-580 OS Caenorhabditis elegans #=GS A0A0K3AUP0/473-580 DE ELAV-Type RNA binding-protein family #=GS A0A0K3AUP0/473-580 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS F0ZDP5/82-188 AC F0ZDP5 #=GS F0ZDP5/82-188 OS Dictyostelium purpureum #=GS F0ZDP5/82-188 DE Uncharacterized protein #=GS F0ZDP5/82-188 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; #=GS B8BVQ4/32-152 AC B8BVQ4 #=GS B8BVQ4/32-152 OS Thalassiosira pseudonana #=GS B8BVQ4/32-152 DE Uncharacterized protein #=GS B8BVQ4/32-152 DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; #=GS H3G175/123-230 AC H3G175 #=GS H3G175/123-230 OS Pristionchus pacificus #=GS H3G175/123-230 DE Uncharacterized protein #=GS H3G175/123-230 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A2G5VDM6/441-556 AC A0A2G5VDM6 #=GS A0A2G5VDM6/441-556 OS Caenorhabditis nigoni #=GS A0A2G5VDM6/441-556 DE Uncharacterized protein #=GS A0A2G5VDM6/441-556 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A8X407/519-634 AC A8X407 #=GS A8X407/519-634 OS Caenorhabditis briggsae #=GS A8X407/519-634 DE Protein CBR-ETR-1 #=GS A8X407/519-634 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2G5VDL8/385-500 AC A0A2G5VDL8 #=GS A0A2G5VDL8/385-500 OS Caenorhabditis nigoni #=GS A0A2G5VDL8/385-500 DE Uncharacterized protein #=GS A0A2G5VDL8/385-500 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A2G5VDL0/456-571 AC A0A2G5VDL0 #=GS A0A2G5VDL0/456-571 OS Caenorhabditis nigoni #=GS A0A2G5VDL0/456-571 DE Uncharacterized protein #=GS A0A2G5VDL0/456-571 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GF SQ 23 A8DYR9/235-343 --------LANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A8DYS3/418-526 --------LANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A7KQE9/396-504 --------LANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- G5EF03/468-575 ---------ANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A8DYS0/472-579 ---------ANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A8DYS1/470-577 ---------ANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3ARP5/239-347 --------LANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3AR42/163-272 -------LLANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3AX15/160-269 -------LLANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3ARQ0/83-196 ---QQYALLANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3AR37/305-413 --------LANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3AU17/237-345 --------LANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3AX10/230-338 --------LANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3AUP5/303-411 --------LANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3AUQ1/162-271 -------LLANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- A0A0K3AUP0/473-580 ---------ANLQATGGVGVQATTSAAQMVGNG--DVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLK--------- F0ZDP5/82-188 -------------------GMTNNGMNQNMGNKKFQSVGPNGSNLFVYNIPNYFTDQELSTLFQQYGNVVSAKVYLDKNTGVSKGFGFISYDNPTSASLAISNLNGSMMVGKKLKVSLKQAGHGSQ-- B8BVQ4/32-152 ----RVGGGGNFRRPSG-GSYAKQPGPPIVEPG--SAKGPEGANLFIFHIPNDFSNQEMYALFAQFGKVLSARIMVESDTGRSRGFGFVSYDSARSAADAISHLNGYSVKGKRLKVQHKQIKGGRNYS H3G175/123-230 ----------VPQVSLAQTAIGATTVTPIVGNG--QSKGPDGCNLFIYHLPQDFSDADLYNTFAPFGNVLSAKVFIDKQTNLSKCFGFVSYDNSQSAANAISGMNGFQIGTKRLKVQLKN-------- A0A2G5VDM6/441-556 -MQQQYALLANLHANSGVQTATTSSSGQLVGNG--DVRGPDGANLFIYHLPQDFGDTDLINTFAPFGQILSAKVFIDKVTNLSKCYGFVSYETPQSANNAIAAMNGFQIGSKRLKVQLK--------- A8X407/519-634 AMQQQYALLANLHANSGVQT-ATTSSGQLVGNG--DVRGPDGANLFIYHLPQDFGDTDLINTFAPFGQILSAKVFIDKVTNLSKCYGFVSYETPQSANNAIAAMNGFQIGSKRLKVQLK--------- A0A2G5VDL8/385-500 -MQQQYALLANLHANSGVQTATTSSSGQLVGNG--DVRGPDGANLFIYHLPQDFGDTDLINTFAPFGQILSAKVFIDKVTNLSKCYGFVSYETPQSANNAIAAMNGFQIGSKRLKVQLK--------- A0A2G5VDL0/456-571 -MQQQYALLANLHANSGVQTATTSSSGQLVGNG--DVRGPDGANLFIYHLPQDFGDTDLINTFAPFGQILSAKVFIDKVTNLSKCYGFVSYETPQSANNAIAAMNGFQIGSKRLKVQLK--------- #=GC scorecons 00000000245444335344365554464777700555996969998876967957477566976894779988668749659867998997656994599757996575698999779000000000 #=GC scorecons_70 ___________________________*_****_____****************_*_**_*_*****_**********_**_**_*******___**__***_****_*__********_________ #=GC scorecons_80 _____________________________****_____**_*_******_*__*_*_**___**_**_******__**_*__**_*******___**__**___**_____********_________ #=GC scorecons_90 ______________________________________**_*_***_*__*__*________*__**___****__*__*__**__**_**____**__**___**_____*_***__*_________ //