# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000502
#=GF DE Pre-mRNA-splicing factor cwc2, putative
#=GF AC 3.30.70.330/FF/000502
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.132
#=GS Q54PH5/183-275      AC Q54PH5
#=GS Q54PH5/183-275      OS Dictyostelium discoideum
#=GS Q54PH5/183-275      DE Pre-mRNA-splicing factor cwc2
#=GS Q54PH5/183-275      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54PH5/183-275      DR GO; GO:0000387; GO:0000974; GO:0005634; GO:0005681; GO:0017070; GO:0033120; GO:0036002; GO:0045292; GO:0045787; 
#=GS A8JGH9/30-127       AC A8JGH9
#=GS A8JGH9/30-127       OS Chlamydomonas reinhardtii
#=GS A8JGH9/30-127       DE Predicted protein
#=GS A8JGH9/30-127       DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; 
#=GS D0MVD9/249-344      AC D0MVD9
#=GS D0MVD9/249-344      OS Phytophthora infestans T30-4
#=GS D0MVD9/249-344      DE Pre-mRNA-splicing factor cwc2, putative
#=GS D0MVD9/249-344      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS D0MSU9/249-344      AC D0MSU9
#=GS D0MSU9/249-344      OS Phytophthora infestans T30-4
#=GS D0MSU9/249-344      DE Pre-mRNA-splicing factor cwc2, putative
#=GS D0MSU9/249-344      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS B3RVJ1/236-324      AC B3RVJ1
#=GS B3RVJ1/236-324      OS Trichoplax adhaerens
#=GS B3RVJ1/236-324      DE Uncharacterized protein
#=GS B3RVJ1/236-324      DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS A7SU80/92-187       AC A7SU80
#=GS A7SU80/92-187       OS Nematostella vectensis
#=GS A7SU80/92-187       DE Predicted protein
#=GS A7SU80/92-187       DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS M2S641/131-223      AC M2S641
#=GS M2S641/131-223      OS Entamoeba histolytica KU27
#=GS M2S641/131-223      DE Pre mRNA-splicing factor cwc2, putative
#=GS M2S641/131-223      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS F4PB39/123-211      AC F4PB39
#=GS F4PB39/123-211      OS Batrachochytrium dendrobatidis JAM81
#=GS F4PB39/123-211      DE Uncharacterized protein
#=GS F4PB39/123-211      DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS B0E7Y0/133-223      AC B0E7Y0
#=GS B0E7Y0/133-223      OS Entamoeba dispar SAW760
#=GS B0E7Y0/133-223      DE Pre-mRNA-splicing factor cwc2, putative
#=GS B0E7Y0/133-223      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba dispar; 
#=GS K2H2P6/131-223      AC K2H2P6
#=GS K2H2P6/131-223      OS Entamoeba nuttalli P19
#=GS K2H2P6/131-223      DE Pre-mRNA-splicing factor cwc2, putative
#=GS K2H2P6/131-223      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba nuttalli; 
#=GS A0A0P1A4M1/251-344  AC A0A0P1A4M1
#=GS A0A0P1A4M1/251-344  OS Plasmopara halstedii
#=GS A0A0P1A4M1/251-344  DE Pre-mrna-splicing factor
#=GS A0A0P1A4M1/251-344  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Plasmopara; Plasmopara halstedii; 
#=GS F0ZDH1/151-241      AC F0ZDH1
#=GS F0ZDH1/151-241      OS Dictyostelium purpureum
#=GS F0ZDH1/151-241      DE Uncharacterized protein
#=GS F0ZDH1/151-241      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS G4YZA3/247-341      AC G4YZA3
#=GS G4YZA3/247-341      OS Phytophthora sojae strain P6497
#=GS G4YZA3/247-341      DE Uncharacterized protein
#=GS G4YZA3/247-341      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS W2GE67/250-344      AC W2GE67
#=GS W2GE67/250-344      OS Phytophthora parasitica
#=GS W2GE67/250-344      DE Uncharacterized protein
#=GS W2GE67/250-344      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8C424/250-344  AC A0A0W8C424
#=GS A0A0W8C424/250-344  OS Phytophthora nicotianae
#=GS A0A0W8C424/250-344  DE Pre-mRNA-splicing factor cwc2
#=GS A0A0W8C424/250-344  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS H3GD55/246-339      AC H3GD55
#=GS H3GD55/246-339      OS Phytophthora ramorum
#=GS H3GD55/246-339      DE Uncharacterized protein
#=GS H3GD55/246-339      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A0A329SP49/251-344  AC A0A329SP49
#=GS A0A329SP49/251-344  OS Phytophthora cactorum
#=GS A0A329SP49/251-344  DE Uncharacterized protein
#=GS A0A329SP49/251-344  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS A0A369SKB0/236-324  AC A0A369SKB0
#=GS A0A369SKB0/236-324  OS Trichoplax sp. H2
#=GS A0A369SKB0/236-324  DE Pre-mRNA-splicing factor cwc2
#=GS A0A369SKB0/236-324  DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; 
#=GS V9EQT1/250-344      AC V9EQT1
#=GS V9EQT1/250-344      OS Phytophthora parasitica P1569
#=GS V9EQT1/250-344      DE Uncharacterized protein
#=GS V9EQT1/250-344      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2PV85/250-344      AC W2PV85
#=GS W2PV85/250-344      OS Phytophthora parasitica INRA-310
#=GS W2PV85/250-344      DE Uncharacterized protein
#=GS W2PV85/250-344      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A080ZR51/250-344  AC A0A080ZR51
#=GS A0A080ZR51/250-344  OS Phytophthora parasitica P1976
#=GS A0A080ZR51/250-344  DE Uncharacterized protein
#=GS A0A080ZR51/250-344  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2YUB8/250-344      AC W2YUB8
#=GS W2YUB8/250-344      OS Phytophthora parasitica P10297
#=GS W2YUB8/250-344      DE Uncharacterized protein
#=GS W2YUB8/250-344      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2WKW5/250-344      AC W2WKW5
#=GS W2WKW5/250-344      OS Phytophthora parasitica CJ01A1
#=GS W2WKW5/250-344      DE Uncharacterized protein
#=GS W2WKW5/250-344      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2IIL3/250-344      AC W2IIL3
#=GS W2IIL3/250-344      OS Phytophthora parasitica
#=GS W2IIL3/250-344      DE Uncharacterized protein
#=GS W2IIL3/250-344      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS M7WJ56/131-223      AC M7WJ56
#=GS M7WJ56/131-223      OS Entamoeba histolytica HM-3:IMSS
#=GS M7WJ56/131-223      DE Pre-mRNA-splicing factor cwc2, putative
#=GS M7WJ56/131-223      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS N9TG08/131-223      AC N9TG08
#=GS N9TG08/131-223      OS Entamoeba histolytica HM-1:IMSS-A
#=GS N9TG08/131-223      DE Pre-mRNA-splicing factor cwc2, putative
#=GS N9TG08/131-223      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS C4LW00/131-223      AC C4LW00
#=GS C4LW00/131-223      OS Entamoeba histolytica
#=GS C4LW00/131-223      DE Cell cycle control protein cwf2, putative
#=GS C4LW00/131-223      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M3SD27/131-223      AC M3SD27
#=GS M3SD27/131-223      OS Entamoeba histolytica HM-1:IMSS-B
#=GS M3SD27/131-223      DE Pre-mRNA-splicing factor cwc2, putative
#=GS M3SD27/131-223      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS A0A177WSM1/123-211  AC A0A177WSM1
#=GS A0A177WSM1/123-211  OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WSM1/123-211  DE Uncharacterized protein
#=GS A0A177WSM1/123-211  DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GF SQ 29
Q54PH5/183-275              ------------------SRDNRTLYIGGIKTNV----SGSLEDMVRKNFEEWGRIEYVRVITNRSISFVRYLTRSSAEFAKEAMTDQTLDN---GELLNIRWATEDSNPYAKKVDER
A8JGH9/30-127               ------------------DRDNRTLYISYEGAGS--YELPKIRQLLEANFKLWGPVNNIYIVHPKNIAFVRYDWRASAEFAKEAMHKQPLLGSSLGEVVTARWANEDPNPVAVAAQKR
D0MVD9/249-344              T---DRDDMAGVGNF---TRNSRTLYVGGLKTASGHEAVKEQEEALWKQFGEWGEVENINVIHRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
D0MSU9/249-344              T---DRDDMAGVGNF---TRNSRTLYVGGLKTASGHEAVKEQEEALWKQFGEWGEVENINVIQRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
B3RVJ1/236-324              ----HRDDMGGIGSF---DKETRTLYVGGLHHRD------NQESILEEEFGEWGEIEDVRYIPKLHVAFVRYRYRLTAEFAKAAMADQKFND---QEVLNVRWAH-------------
A7SU80/92-187               RHSEVRDDQSGVGSFNTDDETSRTVYVGGIACSK------DMKSIVYKHFSEWGEIENMRLLEHKGVAFVRYKLRGSAEFAMEAMQRQSLDD---NEVLNIRWAT-------------
M2S641/131-223              T---ERDDMGGIGRF---SKENRTLYVSGFKGNL---PPQQIEEILRRHFGEWGELEYIRVLPIRNIAFIRYKLRGSAEFAKVAMADQSLDS---NERLNIRWAY-------------
F4PB39/123-211              ----DRDDMGGIGSF---DRLNSTLYVGHVSIDD------DMQGSVSRHFSEWGDVEHINILQDKGVAFVRYVDIPNAEFAKEAMNAQSLDS---GEVLNVRWAT-------------
B0E7Y0/133-223              -----REDMGGIGKF---SKENRTLYVSGFKGNL---PPQEIEEILRRHFGEWGELEYIRVLPIRNIAFIRYKLRGSAEFAKVAMSDQNLDS---NERINIRWAY-------------
K2H2P6/131-223              T---ERDDMGGIGRF---SKENRTLYVSGFKGNL---PPQQIEEILRRHFGEWGELEYIRVLPIRNIAFIRYKLRGSAEFAKVAMADQSLDS---NERLNIRWAY-------------
A0A0P1A4M1/251-344          -----RDDMAGVGNF---TRNSRTLYVGGLKSTNGHEALKLQEDALWKQFGEWGEVENINVITRKSICFVRYRHRTSAEFAKEAMANQTLQS---DEVLNVRWAF-------------
F0ZDH1/151-241              ----DRDDMGGVGSF---SRDNRTLYIGGIKSNL----GGSMEDVVRKHFEEWGKIEYVRVILNRSIAFVRYFYRSNAEFAKEAMADQTLDG---GELLNVRWAT-------------
G4YZA3/247-341              ----DRDDMAGVGNF---TRNSRTLYVGGLKSASGREAVKEQEDALYKQFGEWGEVENINVIHRKSICFVRYRHRTSAEFAKEAMTNQALQS---DEVLNVRWAF-------------
W2GE67/250-344              ----DRDDMAGVGNF---TRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
A0A0W8C424/250-344          ----DRDDMAGVGNF---TRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
H3GD55/246-339              -----RDDMAGVGNF---TRNSRTLYVGGLKSTSGREQVKTQEEALWKQFGEWGEVENINVIHRKSICFVRYRHRTSAEFAKEAMANQSVQS---DEVLNVRWAF-------------
A0A329SP49/251-344          -----RDDMSGVGNF---TRNSRTLYVGGLKTASGHEALKQQQDALWKQFGEWGEVENINVIHRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
A0A369SKB0/236-324          ----HRDDMGGIGSF---DKETRTLYVGGLHHRD------NQESILEEEFGEWGEIEDVRYIPKLHVAFVRYRYRLTAEFAKAAMADQKFND---QEVLNVRWAH-------------
V9EQT1/250-344              ----DRDDMAGVGNF---TRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
W2PV85/250-344              ----DRDDMAGVGNF---TRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
A0A080ZR51/250-344          ----DRDDMAGVGNF---TRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
W2YUB8/250-344              ----DRDDMAGVGNF---TRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
W2WKW5/250-344              ----DRDDMAGVGNF---TRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
W2IIL3/250-344              ----DRDDMAGVGNF---TRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQS---DEVLNVRWAF-------------
M7WJ56/131-223              T---ERDDMGGIGRF---SKENRTLYVSGFKGNL---PPQQIEEILRRHFGEWGELEYIRVLPIRNIAFIRYKLRGSAEFAKVAMADQSLDS---NERLNIRWAY-------------
N9TG08/131-223              T---ERDDMGGIGRF---SKENRTLYVSGFKGNL---PPQQIEEILRRHFGEWGELEYIRVLPIRNIAFIRYKLRGSAEFAKVAMADQSLDS---NERLNIRWAY-------------
C4LW00/131-223              T---ERDDMGGIGRF---SKENRTLYVSGFKGNL---PPQQIEEILRRHFGEWGELEYIRVLPIRNIAFIRYKLRGSAEFAKVAMADQSLDS---NERLNIRWAY-------------
M3SD27/131-223              T---ERDDMGGIGRF---SKENRTLYVSGFKGNL---PPQQIEEILRRHFGEWGELEYIRVLPIRNIAFIRYKLRGSAEFAKVAMADQSLDS---NERLNIRWAY-------------
A0A177WSM1/123-211          ----DRDDMGGIGSF---DRLNSTLYVGHVSIDD------DMQGSVSRHFSEWGDVEHINILQDKGVAFVRYVDIPNAEFAKEAMNAQSLDS---GEVLNVRWAT-------------
#=GC scorecons              0000366664656360004645798976645443101222446547355967996685756643657597994374699998599559574600049588699940000000000000
#=GC scorecons_70           _____***__*_*_*____*__*******_____________*__*___*_****_*_*_**____*_****__*_******_**__*_*______*_******______________
#=GC scorecons_80           ______________________*****______________________*_***__*_*_______*_****__*__*****_**__*_*______*_**_***______________
#=GC scorecons_90           _______________________***_______________________*__**__*___________*_**_____*****_**__*________*__*_***______________
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