# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/001007
#=GF DE Homologous to Drosophila SQD (Squid) protein
#=GF AC 3.30.70.330/FF/001007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 58.035
#=GS Q4W5P0/109-223      AC Q4W5P0
#=GS Q4W5P0/109-223      OS Caenorhabditis elegans
#=GS Q4W5P0/109-223      DE Homologous to Drosophila SQD (Squid) protein
#=GS Q4W5P0/109-223      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q8MXR6/109-223      AC Q8MXR6
#=GS Q8MXR6/109-223      OS Caenorhabditis elegans
#=GS Q8MXR6/109-223      DE Homologous to Drosophila SQD (Squid) protein
#=GS Q8MXR6/109-223      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS T1G921/104-234      AC T1G921
#=GS T1G921/104-234      OS Helobdella robusta
#=GS T1G921/104-234      DE Uncharacterized protein
#=GS T1G921/104-234      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS H3E9J7/100-207      AC H3E9J7
#=GS H3E9J7/100-207      OS Pristionchus pacificus
#=GS H3E9J7/100-207      DE Uncharacterized protein
#=GS H3E9J7/100-207      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2G5U241/109-220  AC A0A2G5U241
#=GS A0A2G5U241/109-220  OS Caenorhabditis nigoni
#=GS A0A2G5U241/109-220  DE Uncharacterized protein
#=GS A0A2G5U241/109-220  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261ATQ1/108-222  AC A0A261ATQ1
#=GS A0A261ATQ1/108-222  OS Caenorhabditis latens
#=GS A0A261ATQ1/108-222  DE Uncharacterized protein
#=GS A0A261ATQ1/108-222  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A261AHT7/108-222  AC A0A261AHT7
#=GS A0A261AHT7/108-222  OS Caenorhabditis remanei
#=GS A0A261AHT7/108-222  DE Uncharacterized protein
#=GS A0A261AHT7/108-222  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A1I7SYQ0/76-191   AC A0A1I7SYQ0
#=GS A0A1I7SYQ0/76-191   OS Caenorhabditis tropicalis
#=GS A0A1I7SYQ0/76-191   DE Uncharacterized protein
#=GS A0A1I7SYQ0/76-191   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A8WZY6/109-220      AC A8WZY6
#=GS A8WZY6/109-220      OS Caenorhabditis briggsae
#=GS A8WZY6/109-220      DE Protein CBR-SQD-1
#=GS A8WZY6/109-220      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS E3NUW8/108-222      AC E3NUW8
#=GS E3NUW8/108-222      OS Caenorhabditis remanei
#=GS E3NUW8/108-222      DE Uncharacterized protein
#=GS E3NUW8/108-222      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GF SQ 10
Q4W5P0/109-223              ----------NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKR--FPGAQGRMPGG---RGMYGGRGGNNNSGWYAGWG-------Q
Q8MXR6/109-223              ----------NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKR--FPGAQGRMPGG---RGMYGGRGGNNNSGWYAGWG-------Q
T1G921/104-234              GPSSYGKDPPCKKIFVGGLDTNLSQEEIAEHFSQYGKVELVELPYDKVKNQRRAFGFITFDNEDIVEQMCQNAKVPFGDKMLDVRKAVSREQQEAHGYRGGR--GGGPMRGAFRGKAG----GYYNSMGGYEMNGLY
H3E9J7/100-207              ----------NKKVFVGGLPSDFSEEELKKHFEQYGRVEDIEWPFDKITKARRNFAFIVFEEEDSADKASAQMKQTFGSRECDVKKAVPQAKR--FGPGGTR--GG---RMGFGGRGG-ANANWYH-----------
A0A2G5U241/109-220          ----------NKKVFVGGLPSDYSEAELRTHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKR--FPPGQGRMPGG---RGMYGGRGGNNNSAWYAG----------
A0A261ATQ1/108-222          ---------ENKKVFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKR--FPGAQGRIPGG---RGMYGGRGGNNNAGWYAGWG--------
A0A261AHT7/108-222          ---------ENKKVFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKR--FPGAQGRIPGG---RGMYGGRGGNNNAGWYAGWG--------
A0A1I7SYQ0/76-191           ---------ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKR--FPGAQGRMPGG---RGMYGGRGGNNNSGWYAGWG-------Q
A8WZY6/109-220              ----------NKKVFVGGLPSDYSEAELRTHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKR--FPPGQGRMPGG---RGMYGGRGGNNNSAWYAG----------
E3NUW8/108-222              ---------ENKKVFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKR--FPGAQGRIPGG---RGMYGGRGGNNNAGWYAGWG--------
#=GC scorecons              00000000005997999995665964764399597979647959799456499596995976965676564559469947449979996656600553457922990009647597692342559441400000000
#=GC scorecons_70           ___________********__*_**_**__**_******_**_****____**_*_**_**_**__**_____*__**_*__******_*_**_______**__**___**_*_**_*______*____________
#=GC scorecons_80           ___________**_*****____*__*___**_*****___*_****____**_*_**_*__*__________*__**____**_***____________**__**___*__*_*__*______*____________
#=GC scorecons_90           ___________**_*****____*______**_*_*_*___*_*_**____**_*_**_*__*__________*__**____**_***_____________*__**___*____*__*______*____________
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