# STOCKHOLM 1.0
#=GF ID 3.30.50.10/FF/000063
#=GF DE CRE-NHR-48 protein
#=GF AC 3.30.50.10/FF/000063
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 21.176
#=GS Q94407/90-200       AC Q94407
#=GS Q94407/90-200       OS Caenorhabditis elegans
#=GS Q94407/90-200       DE Nuclear hormone receptor family member nhr-48
#=GS Q94407/90-200       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A8X451/101-234      AC A8X451
#=GS A8X451/101-234      OS Caenorhabditis briggsae
#=GS A8X451/101-234      DE Protein CBR-NHR-48
#=GS A8X451/101-234      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A261CM89/105-215  AC A0A261CM89
#=GS A0A261CM89/105-215  OS Caenorhabditis latens
#=GS A0A261CM89/105-215  DE Uncharacterized protein
#=GS A0A261CM89/105-215  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5T074/102-213  AC A0A2G5T074
#=GS A0A2G5T074/102-213  OS Caenorhabditis nigoni
#=GS A0A2G5T074/102-213  DE Uncharacterized protein
#=GS A0A2G5T074/102-213  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS E3MJC5/96-206       AC E3MJC5
#=GS E3MJC5/96-206       OS Caenorhabditis remanei
#=GS E3MJC5/96-206       DE CRE-NHR-48 protein
#=GS E3MJC5/96-206       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A1I7TRU3/66-176   AC A0A1I7TRU3
#=GS A0A1I7TRU3/66-176   OS Caenorhabditis tropicalis
#=GS A0A1I7TRU3/66-176   DE Uncharacterized protein
#=GS A0A1I7TRU3/66-176   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS G0MAS2/96-206       AC G0MAS2
#=GS G0MAS2/96-206       OS Caenorhabditis brenneri
#=GS G0MAS2/96-206       DE CBN-NHR-48 protein
#=GS G0MAS2/96-206       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A2G5T073/179-290  AC A0A2G5T073
#=GS A0A2G5T073/179-290  OS Caenorhabditis nigoni
#=GS A0A2G5T073/179-290  DE Uncharacterized protein
#=GS A0A2G5T073/179-290  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5SZS6/166-277  AC A0A2G5SZS6
#=GS A0A2G5SZS6/166-277  OS Caenorhabditis nigoni
#=GS A0A2G5SZS6/166-277  DE Uncharacterized protein
#=GS A0A2G5SZS6/166-277  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261B8K9/103-213  AC A0A261B8K9
#=GS A0A261B8K9/103-213  OS Caenorhabditis remanei
#=GS A0A261B8K9/103-213  DE Uncharacterized protein
#=GS A0A261B8K9/103-213  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A261BA93/103-213  AC A0A261BA93
#=GS A0A261BA93/103-213  OS Caenorhabditis remanei
#=GS A0A261BA93/103-213  DE Uncharacterized protein
#=GS A0A261BA93/103-213  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GF SQ 11
Q94407/90-200               KESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFA----VGMKKEWIMSEEARLEKKQRVEENRERRLQDAMNRALE-------------------
A8X451/101-234              TESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFSVSRDVGMKKEWIMSEEARLEKKQRVEENREKRMLDAIKNENENSQGQSQQQQHMQQDENMY
A0A261CM89/105-215          KESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENRERRLQDALNKALE-------------------
A0A2G5T074/102-213          TESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENREKRMQDAIKNSEND------------------
E3MJC5/96-206               KESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENRERRLQDALNKALE-------------------
A0A1I7TRU3/66-176           KESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENRERRLQDAINRALE-------------------
G0MAS2/96-206               KESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCDINQVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENRERRMMDAMKCAID-------------------
A0A2G5T073/179-290          TESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENREKRMQDAIKNSEND------------------
A0A2G5SZS6/166-277          TESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENREKRMQDAIKNSEND------------------
A0A261B8K9/103-213          KESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENRERRLQDALNKALE-------------------
A0A261BA93/103-213          KESKRTANKVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFS----VGMKKEWIMSEEARLEKKQRVEENRERRLQDALNKALE-------------------
#=GC scorecons              59999999999999999999999999999999999999999999999999999899799999999999999980000999999999999999999999999996964996644361000000000000000000
#=GC scorecons_70           _************************************************************************____*****************************_**_________________________
#=GC scorecons_80           _************************************************************************____**************************_*__**_________________________
#=GC scorecons_90           _*******************************************************_****************____**************************_*__**_________________________
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