# STOCKHOLM 1.0
#=GF ID 3.30.450.20/FF/000130
#=GF DE Period protein homolog lin-42
#=GF AC 3.30.450.20/FF/000130
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 13.493
#=GS Q65ZG8/158-315      AC Q65ZG8
#=GS Q65ZG8/158-315      OS Caenorhabditis elegans
#=GS Q65ZG8/158-315      DE Period protein homolog lin-42
#=GS Q65ZG8/158-315      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q65ZG8/158-315      DR GO; GO:0001085; GO:0005634; GO:0005737; GO:0040034; GO:0061067; GO:1902894; 
#=GS A0A131MBE1/215-371  AC A0A131MBE1
#=GS A0A131MBE1/215-371  OS Caenorhabditis elegans
#=GS A0A131MBE1/215-371  DE Period protein homolog lin-42
#=GS A0A131MBE1/215-371  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A0A131MAY5/215-372  AC A0A131MAY5
#=GS A0A131MAY5/215-372  OS Caenorhabditis elegans
#=GS A0A131MAY5/215-372  DE Period protein homolog lin-42
#=GS A0A131MAY5/215-372  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A0A2G5VD16/217-373  AC A0A2G5VD16
#=GS A0A2G5VD16/217-373  OS Caenorhabditis nigoni
#=GS A0A2G5VD16/217-373  DE Uncharacterized protein
#=GS A0A2G5VD16/217-373  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8X3H0/261-415      AC A8X3H0
#=GS A8X3H0/261-415      OS Caenorhabditis briggsae
#=GS A8X3H0/261-415      DE Protein CBR-LIN-42.1
#=GS A8X3H0/261-415      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A260ZRD3/176-328  AC A0A260ZRD3
#=GS A0A260ZRD3/176-328  OS Caenorhabditis latens
#=GS A0A260ZRD3/176-328  DE Uncharacterized protein
#=GS A0A260ZRD3/176-328  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A1I7TGD7/157-316  AC A0A1I7TGD7
#=GS A0A1I7TGD7/157-316  OS Caenorhabditis tropicalis
#=GS A0A1I7TGD7/157-316  DE Uncharacterized protein
#=GS A0A1I7TGD7/157-316  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS G0N4W9/210-366      AC G0N4W9
#=GS G0N4W9/210-366      OS Caenorhabditis brenneri
#=GS G0N4W9/210-366      DE CBN-LIN-42 protein
#=GS G0N4W9/210-366      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3MDP6/177-332      AC E3MDP6
#=GS E3MDP6/177-332      OS Caenorhabditis remanei
#=GS E3MDP6/177-332      DE CRE-LIN-42 protein
#=GS E3MDP6/177-332      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A2G5VD11/217-371  AC A0A2G5VD11
#=GS A0A2G5VD11/217-371  OS Caenorhabditis nigoni
#=GS A0A2G5VD11/217-371  DE Uncharacterized protein
#=GS A0A2G5VD11/217-371  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A260ZST0/176-328  AC A0A260ZST0
#=GS A0A260ZST0/176-328  OS Caenorhabditis latens
#=GS A0A260ZST0/176-328  DE Uncharacterized protein
#=GS A0A260ZST0/176-328  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5VD32/200-354  AC A0A2G5VD32
#=GS A0A2G5VD32/200-354  OS Caenorhabditis nigoni
#=GS A0A2G5VD32/200-354  DE Uncharacterized protein
#=GS A0A2G5VD32/200-354  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A260YVN8/162-316  AC A0A260YVN8
#=GS A0A260YVN8/162-316  OS Caenorhabditis remanei
#=GS A0A260YVN8/162-316  DE Uncharacterized protein
#=GS A0A260YVN8/162-316  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GF SQ 13
Q65ZG8/158-315              --SHVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHIDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDSDVISSPPPGIQSNTLPPVMAKTFEDELRTIMNKPVP
A0A131MBE1/215-371          --SHVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHIDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDSDVISSPPPGIQSNTLPPVMAKTFEDELRTIMNKVS-
A0A131MAY5/215-372          --SHVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHIDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDSDVISSPPPGIQSNTLPPVMAKTFEDELRTIMNKPVP
A0A2G5VD16/217-373          ---HVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYTPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISAPPVGLQSKTLPTVMAKTFEDELRTIMNKYLP
A8X3H0/261-415              ----VSSHFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYTPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISAPPVGLQSKTLPTVMAKTFEDELRTIMNKVS-
A0A260ZRD3/176-328          ---TVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISSPPAGIQTNTLPPVMAKTFEDELRTIMN----
A0A1I7TGD7/157-316          QTSHVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISAPPAGVQSNTLPPVMAKTFEDELRTIMNKPVP
G0N4W9/210-366              ---HLSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHIDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISAPPAGVQSNTLPPVMAKTFEDELRTIMNKPVP
E3MDP6/177-332              ----VSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISSPPAGIQTNTLPPVMAKTFEDELRTIMNKPVP
A0A2G5VD11/217-371          ---HVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYTPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISAPPVGLQSKTLPTVMAKTFEDELRTIMNKE--
A0A260ZST0/176-328          ---TVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISSPPAGIQTNTLPPVMAKTFEDELRTIMN----
A0A2G5VD32/200-354          ---HVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYTPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISAPPVGLQSKTLPTVMAKTFEDELRTIMNKE--
A0A260YVN8/162-316          ---TVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHVDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRICSLPIGDADVISSPPAGIQTNTLPPVMAKTFEDELRTIMNKV--
#=GC scorecons              0004899899999999999999999999999999999999999999999999699999999997999999999999999999999999999999999999999999999999999999999996999969959696699969999999999999996211
#=GC scorecons_70           ____****************************************************************************************************************************_**_*_**********************____
#=GC scorecons_80           ____************************************************_**********************************************************************_****_**_*_*__***_***************____
#=GC scorecons_90           ____***_********************************************_**********_***********************************************************_****_**_*_*__***_***************____
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