# STOCKHOLM 1.0
#=GF ID 3.30.450.20/FF/000101
#=GF DE Similar, isoform B
#=GF AC 3.30.450.20/FF/000101
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 90.586
#=GS Q24167/169-306      AC Q24167
#=GS Q24167/169-306      OS Drosophila melanogaster
#=GS Q24167/169-306      DE Protein similar
#=GS Q24167/169-306      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q24167/169-306      DR GO; GO:0001228; GO:0005634; GO:0005829; GO:0006355; GO:0008286; GO:0010508; GO:0030308; GO:0030334; GO:0032869; GO:0045088; GO:0045944; GO:0048477; GO:0060438; GO:0071456; GO:0090575; 
#=GS F1QFL2/73-189       AC F1QFL2
#=GS F1QFL2/73-189       OS Danio rerio
#=GS F1QFL2/73-189       DE Hypoxia-inducible factor 1 subunit alpha a
#=GS F1QFL2/73-189       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS F1QFL2/73-189       DR GO; GO:0007219; GO:0045765; GO:0060218; GO:1905517; 
#=GS B7Z0S3/169-306      AC B7Z0S3
#=GS B7Z0S3/169-306      OS Drosophila melanogaster
#=GS B7Z0S3/169-306      DE Similar, isoform B
#=GS B7Z0S3/169-306      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4LIX2/255-392  AC A0A0B4LIX2
#=GS A0A0B4LIX2/255-392  OS Drosophila melanogaster
#=GS A0A0B4LIX2/255-392  DE Similar, isoform D
#=GS A0A0B4LIX2/255-392  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q5U0W0/169-306      AC Q5U0W0
#=GS Q5U0W0/169-306      OS Drosophila melanogaster
#=GS Q5U0W0/169-306      DE GH16921p
#=GS Q5U0W0/169-306      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A7RUS9/44-171       AC A7RUS9
#=GS A7RUS9/44-171       OS Nematostella vectensis
#=GS A7RUS9/44-171       DE Predicted protein
#=GS A7RUS9/44-171       DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS Q7PRA0/230-369      AC Q7PRA0
#=GS Q7PRA0/230-369      OS Anopheles gambiae
#=GS Q7PRA0/230-369      DE AGAP002942-PA
#=GS Q7PRA0/230-369      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS W4ZLE3/140-278      AC W4ZLE3
#=GS W4ZLE3/140-278      OS Strongylocentrotus purpuratus
#=GS W4ZLE3/140-278      DE Uncharacterized protein
#=GS W4ZLE3/140-278      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS A0A221C9F7/94-236   AC A0A221C9F7
#=GS A0A221C9F7/94-236   OS Strongylocentrotus purpuratus
#=GS A0A221C9F7/94-236   DE Hypoxia inducible factor alpha
#=GS A0A221C9F7/94-236   DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS H3FLA6/58-204       AC H3FLA6
#=GS H3FLA6/58-204       OS Pristionchus pacificus
#=GS H3FLA6/58-204       DE Uncharacterized protein
#=GS H3FLA6/58-204       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A084W762/112-251  AC A0A084W762
#=GS A0A084W762/112-251  OS Anopheles sinensis
#=GS A0A084W762/112-251  DE AGAP002942-PA-like protein
#=GS A0A084W762/112-251  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Anopheles; Laticorn; Myzorhynchus; hyrcanus group; Anopheles sinensis; 
#=GS A0A182MJS4/339-478  AC A0A182MJS4
#=GS A0A182MJS4/339-478  OS Anopheles culicifacies
#=GS A0A182MJS4/339-478  DE Uncharacterized protein
#=GS A0A182MJS4/339-478  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles culicifacies; 
#=GS A0A182JM31/339-475  AC A0A182JM31
#=GS A0A182JM31/339-475  OS Anopheles atroparvus
#=GS A0A182JM31/339-475  DE Uncharacterized protein
#=GS A0A182JM31/339-475  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Anopheles; Angusticorn; Anopheles; maculipennis group; Anopheles atroparvus; 
#=GS A0A182T4U4/21-160   AC A0A182T4U4
#=GS A0A182T4U4/21-160   OS Anopheles maculatus
#=GS A0A182T4U4/21-160   DE Uncharacterized protein
#=GS A0A182T4U4/21-160   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles maculatus group; Anopheles maculatus; 
#=GS A0A182QSP3/344-483  AC A0A182QSP3
#=GS A0A182QSP3/344-483  OS Anopheles farauti
#=GS A0A182QSP3/344-483  DE Uncharacterized protein
#=GS A0A182QSP3/344-483  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles farauti; 
#=GS A0A182VYM2/181-320  AC A0A182VYM2
#=GS A0A182VYM2/181-320  OS Anopheles minimus
#=GS A0A182VYM2/181-320  DE Uncharacterized protein
#=GS A0A182VYM2/181-320  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; minimus group; Anopheles minimus; 
#=GS A0A1W4VTP6/264-401  AC A0A1W4VTP6
#=GS A0A1W4VTP6/264-401  OS Drosophila ficusphila
#=GS A0A1W4VTP6/264-401  DE protein similar isoform X1
#=GS A0A1W4VTP6/264-401  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4R1I3/169-306      AC B4R1I3
#=GS B4R1I3/169-306      OS Drosophila simulans
#=GS B4R1I3/169-306      DE Similar
#=GS B4R1I3/169-306      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4HZL9/171-308      AC B4HZL9
#=GS B4HZL9/171-308      OS Drosophila sechellia
#=GS B4HZL9/171-308      DE GM12862
#=GS B4HZL9/171-308      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A1W4VGE5/162-299  AC A0A1W4VGE5
#=GS A0A1W4VGE5/162-299  OS Drosophila ficusphila
#=GS A0A1W4VGE5/162-299  DE protein similar isoform X2
#=GS A0A1W4VGE5/162-299  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3P7Y5/164-301      AC B3P7Y5
#=GS B3P7Y5/164-301      OS Drosophila erecta
#=GS B3P7Y5/164-301      DE GG11733
#=GS B3P7Y5/164-301      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A1W4VUG7/162-299  AC A0A1W4VUG7
#=GS A0A1W4VUG7/162-299  OS Drosophila ficusphila
#=GS A0A1W4VUG7/162-299  DE protein similar isoform X3
#=GS A0A1W4VUG7/162-299  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4PLS5/167-304      AC B4PLS5
#=GS B4PLS5/167-304      OS Drosophila yakuba
#=GS B4PLS5/167-304      DE Uncharacterized protein, isoform A
#=GS B4PLS5/167-304      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 23
Q24167/169-306              AEARELLKQTMDGFLLVLSHEGDITYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
F1QFL2/73-189               --WNGSFLKALDGFLLVLSADGDIVYLSENVSKCLGLPQIELTGHSVFEFTHPCDHEELREMLAHRFGLS--------KKSKDQNTNRSFLLRMKCTLTS---------RGRTVNVKSASWKVLRCSGRIHTADGV----------------------
B7Z0S3/169-306              AEARELLKQTMDGFLLVLSHEGDITYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
A0A0B4LIX2/255-392          AEARELLKQTMDGFLLVLSHEGDITYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
Q5U0W0/169-306              AEARELLKQTMDGFLLVLSHEGDITYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
A7RUS9/44-171               -KVLMHPLLALDGFVIVLTQDFELFYASETIQTYLGLSQASVIHQDFLRFIHVDDHEMITKYLQPNSVEQ--------SSESALSAERTFVCRMKCILNT---------SAGFFKVYIFRIKILDMTLPESDKREY----G--------LFLICTPME
Q7PRA0/230-369              LDPETIALQTLDGFLIILSADGDVTYVSENVNEYLGISQIDIMGQPIWDYSHQCDHDELREALNGRHHSPSELLNGVANSDCRPMENRDFFLRLKCTLTS---------RGRSVNIKSASYKVLHVTGHIACKDKE----GQRQ-----LVAIARPLP
W4ZLE3/140-278              ------YQKALDGFLLVLSQEGDMIYISENVSKHIGINQVDLMGQSIYDYAHPCDHDEIREQLSDRPGLT---LTTL-PSATSKRKHHGFLMRVKCTLTP---------KGKIVNLKAASYKAVHCQGHMKLALSDTSVLGYRMPPTPCLVLIASPIP
A0A221C9F7/94-236           --IDSHYQKALDGFLLVLSQEGDMIYISENVSKHIGINQVDLMGQSIYDYAHPCDHDEIREQLSDRPGLT---LTTL-PSATSKRKHHGFLMRVKCTLTP---------KGKIVNLKAASYKAVHCQGHMKLALSDTSVLGYRMPPTPCPVLIASPIP
H3FLA6/58-204               SDYSSLALKALGGFILILNDNGEIYYASENVEQFLGFHQSDILHQPLYDLIHSEDREDIRQQLDPNLGNQEPFNP---SSFTPDALERSVNARFRCLLDNTCGFLRMDVRGRLIGLHGLPSSYIAERGGPTNSNGQ----GALL----GLLAVCTPFV
A0A084W762/112-251          LEPEMVALQALDGFLMILSADGDVTYISENVSEYLGISQIDIMGQPIWEYSHQCDHDELREALNGRHHSPSELLNGVANSDCRPMENRDFFLRLKCTLTS---------RGRSVNIKSASYKVLHVTGHIACKDKE----GQRQ-----LVSIARPLP
A0A182MJS4/339-478          LEPETIALQTLDGFLMILSADGDVTYISENVSEYLGISQIDIMGQPIWDYSHQCDHDELREALNGRRHSPSELLNGVANSDCRPMENRDFFLRLKCTLTS---------RGRSVNIKSASYKVLHVTGHIACKDKE----GQRQ-----LVAIARPLP
A0A182JM31/339-475          ---ELAAMQALDGFLMILSAEGDVTYISENVSDYLGISQIDIMGQPIWEYTHQCDHDELREALNGRHHSPSELLNGVANSDCRPMENRDFFLRLKCTLTS---------RGRSVNIKSASYKVLHVTGHIACKDKE----GQRQ-----LVSIARPLP
A0A182T4U4/21-160           LEPEAIALQTLDGFLMILSADGDVTYISENVSEYLGISQIDIMGQPIWDYSHQCDHDELREALNGRHHSPSELLNGVANSDCRPMENRDFFLRLKCTLTS---------RGRSVNIKSASYKVLHVTGHIACKDKE----GQRQ-----LVAIARPLP
A0A182QSP3/344-483          LEPETIALQTLDGFLMILSADGDVTYISENVSEYLGISQIDIMGQPIWDYSHQCDHDELREALNGRHHSPSELLNGVANSDCRPMENRDFFLRLKCTLTS---------RGRSVNIKSASYKVLHVTGHIACKDRE----GQRQ-----LVAIARPLP
A0A182VYM2/181-320          LEPETIALQTLDGFLIILSADGDVTYISENVSEYLGISQIDIMGQPIWDYSHQCDHDELREALNGRRHSPSELLNGVANSDCRPMENRDFFLRLKCTLTS---------RGRSVNIKSASYKVLHVTGHIACKDKE----GQRQ-----LVAIARPLP
A0A1W4VTP6/264-401          ADARELLKQTMDGFLLVLSHEGDITYVSENVVEHLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKREIAAKVKDEPHQDSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
B4R1I3/169-306              AEARELLKQTMDGFLLVLSHEGDITYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
B4HZL9/171-308              AEARELLKQTMDGFLLVLSHEGDITYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKDALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
A0A1W4VGE5/162-299          ADARELLKQTMDGFLLVLSHEGDITYVSENVVEHLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKREIAAKVKDEPHQDSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
B3P7Y5/164-301              AEARELLKQTMDGFLLVLSHEGDITYVSENVVEHLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKREIAQKVKDEPQQDLGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
A0A1W4VUG7/162-299          ADARELLKQTMDGFLLVLSHEGDITYVSENVVEHLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKREIAAKVKDEPHQDSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
B4PLS5/167-304              AEARELLKQTMDGFLLVLSHEGDITYVSENVVEHLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKREIAQKVKDEPQQDSGVSTHHRDLFVRLKCTLTS---------RGRSINIKSASYKVIHITGHLVVNAK-----GERL-----LMAIGRPI-
#=GC scorecons              23233344566899767974677659599884567964667556846567595698576675943644342223322145443343575654968979760000000007875676766767666467643343510000735300000745744751
#=GC scorecons_70           _________**********_***__*_****__****_***__**_*_**_*_***_****_*________________________*____*_*****__________***_****_**_*__*__**___________*________*__*__*__
#=GC scorecons_80           ___________****_***__**__*_****___**____*___*____*_*__**_*__*_*________________________*____*_**_*____________**__*______*_____*____________*___________*__*__
#=GC scorecons_90           ___________***___*_______*_****____*________*______*__**______*_____________________________*_**_*____________*_______________________________________________
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