# STOCKHOLM 1.0 #=GF ID 3.30.420.110/FF/000027 #=GF DE DNA mismatch repair protein #=GF AC 3.30.420.110/FF/000027 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 78.114 #=GS Q9N3T8/384-569 AC Q9N3T8 #=GS Q9N3T8/384-569 OS Caenorhabditis elegans #=GS Q9N3T8/384-569 DE DNA mismatch repair protein #=GS Q9N3T8/384-569 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q9N3T8/384-569 DR GO; GO:0000400; GO:0006298; GO:0032301; GO:0043570; #=GS Q9VUM0/391-577 AC Q9VUM0 #=GS Q9VUM0/391-577 OS Drosophila melanogaster #=GS Q9VUM0/391-577 DE Probable DNA mismatch repair protein Msh6 #=GS Q9VUM0/391-577 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q9VUM0/391-577 DR GO; GO:0000710; GO:0006281; #=GS Q7QBF8/487-677 AC Q7QBF8 #=GS Q7QBF8/487-677 OS Anopheles gambiae #=GS Q7QBF8/487-677 DE DNA mismatch repair protein #=GS Q7QBF8/487-677 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS A8XL37/384-568 AC A8XL37 #=GS A8XL37/384-568 OS Caenorhabditis briggsae #=GS A8XL37/384-568 DE DNA mismatch repair protein #=GS A8XL37/384-568 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2G5VVR7/375-559 AC A0A2G5VVR7 #=GS A0A2G5VVR7/375-559 OS Caenorhabditis nigoni #=GS A0A2G5VVR7/375-559 DE DNA mismatch repair protein #=GS A0A2G5VVR7/375-559 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A182TRE7/377-567 AC A0A182TRE7 #=GS A0A182TRE7/377-567 OS Anopheles melas #=GS A0A182TRE7/377-567 DE Uncharacterized protein #=GS A0A182TRE7/377-567 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles melas; #=GS B4HI59/393-579 AC B4HI59 #=GS B4HI59/393-579 OS Drosophila sechellia #=GS B4HI59/393-579 DE DNA mismatch repair protein #=GS B4HI59/393-579 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS B4QKL0/393-579 AC B4QKL0 #=GS B4QKL0/393-579 OS Drosophila simulans #=GS B4QKL0/393-579 DE DNA mismatch repair protein #=GS B4QKL0/393-579 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS B3NI00/391-577 AC B3NI00 #=GS B3NI00/391-577 OS Drosophila erecta #=GS B3NI00/391-577 DE DNA mismatch repair protein #=GS B3NI00/391-577 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; #=GS B4PCD8/391-577 AC B4PCD8 #=GS B4PCD8/391-577 OS Drosophila yakuba #=GS B4PCD8/391-577 DE DNA mismatch repair protein #=GS B4PCD8/391-577 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GF SQ 10 Q9N3T8/384-569 AKHLLAIKEFHNPETGKSSYGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIVERGSISSTTKSIINGILFSVPVEHLLP-KKQFMTAEDVVRIVSNEDYYGSDA--SEWPEVLKGMLEDSSILP-KPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIYNSNSMEN---DQKKEKIDWNGK Q9VUM0/391-577 -NYMLAIVEK-DEGTCS-RYGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQIVRTVLGGILKEPVPGNGKHACSAEKTLKLLAERYYAGPGSD-DNWPLVLRTMQSDMDHLGLTPNDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQLADAKPAVASTLRRS-- Q7QBF8/487-677 -RYMLAITESGRQGTAGCRYGVCFIDTSIGLFHLGEFEDDNQQSRLLTFLSHYPPVLVLHERATPSEGMQRIFKTLLANVKREALTA-GTQLWTGEKTLKYLAETVYGGSSSEGSKWPATLRTMLDETDSLGLTPKESYQLALKALGGCVWYLQRCLLDQQVLSLATFEEYVPLDEHRETTETIAKRIDDAAR A8XL37/384-568 AKHLLAIKEFHNTETGKSTYGVCMIDTTTAHIRVGQFEDDDYRSQLRTLFANVIVVQTLVERSSMSVSTKSIINGILFSVPIEHLLP-KKQFLTAEDCVRDLSKDDYFGSEV--SGWPDVLKLMLDDSSVLP-KPSSKWQLAFSAFGAIVWYLRDSLIDVDMISMRNITLYDSNNSKPEKINQEDDKVD---- A0A2G5VVR7/375-559 AKHLLAIKEFHNTETGKSTYGVCMIDTTTAHIRVGQFEDDDYRSQLRTLLANVIVVQTLVERSSMSVSTKSIINGILFSVPIEHLLP-KKQFLTAEDCVRDLSKDDYFGSEV--SGWPDVLKLMLDDSSVLP-KPSSKWQLALSAFGAIVWYLRDSLIDVDMLSMRNITLYDSNNSKPEKIDQEDDKVD---- A0A182TRE7/377-567 -RYMLAITESGRQGTAGCRYGVCFIDTSIGLFHLGEFDDDNQQSRLLTFLSHYPPVLVLHERATPSEGMQRIFKTLLANVKREALTA-GTQLWTGEKTLKYLAETVYGGSSSERSKWPATLRTMLDETDSLGLTPKESYQLALKALGGCVWYLQRCLLDQQVLSLATFEEYVPLDEHREATETIAKRIDDAAR B4HI59/393-579 -NYMLAIVEQ-DEGTWS-RYGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQILRTVLGGILKEPVPGNGKNACSAEKTLKLLAERYYAGNGSD-DNWPLVLRTMQSDMDHLGLTPDDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQLADAKPAVASTLRRS-- B4QKL0/393-579 -NYMLAIVEQ-DEGTWS-RYGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQIVRTVLGGILKEPVPGNGKNACSAEKTLKLLAERYYAGNGSD-DNWPLVLRTMQSDMDHLGLTPDDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQLADAKPAVASTLRRS-- B3NI00/391-577 -NYMLAIVEQ-DEGTWS-RYGVCFIDTSIGDFHVGEFEDDKNCSRLLTLLSHHMPVLLLNEKSALSQRSQQIVRTVLGGILKEQVPGNGTQACSAEKTLKLLAERYYAGSGSD-DNWPLVLRTMQSDMDHLGLTPNDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQLADAKPAVASTLRRS-- B4PCD8/391-577 -NYMLAIVEQ-DEGTWS-RYGVCFIDTSIGDFHLGEFEDDKNCSRLLTLLSHHMPVLLLNEKSALSQRSQQIVRTVLGGILKEQVPGNGNQACSAEKTLKLLAERYYAGNGAD-DNWPLVLRTMQSDMDHLGLTPNDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQLEDAKPAVASTLRRS-- #=GC scorecons 0576999393144693415999959996663565969899544969497666445953749755493456495555934743946441556436695567376543939644205499369749557453953594445699759694555765564674467675444494645333533443544552200 #=GC scorecons_70 __*****_*_____*____****_***_____*_******___***_**______*__*_**___*___*_*____*__*__*_*_____*___**__**_*____*_*_______**_***_*__*___*___*____****_***____**____**__**_*_____*______________________ #=GC scorecons_80 ____***_*_____*____****_***_______*_****___*_*_*_______*__*_*____*_____*____*_____*____________*_____*____*_*_______**__*__*__*___*___*_____***_*_*____*__________*_*_____*______________________ #=GC scorecons_90 ____***_*_____*____****_***_______*_****___*_*_*_______*____*____*_____*____*_____*____________*__________*_*_______**__*__*______*___*_____**__*_*_______________________*______________________ //