# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/000784
#=GF DE Ubiquitin carboxyl-terminal hydrolase
#=GF AC 3.30.40.10/FF/000784
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.337
#=GS Q9VZU7/1-106      AC Q9VZU7
#=GS Q9VZU7/1-106      OS Drosophila melanogaster
#=GS Q9VZU7/1-106      DE Ubiquitin carboxyl-terminal hydrolase
#=GS Q9VZU7/1-106      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VZU7/1-106      DR GO; GO:0001751; GO:0004843; GO:0005634; GO:0005737; GO:0010992; GO:0010995; GO:0016579; GO:0043066; GO:0043161; GO:0046329; GO:0071108; GO:0090364; GO:1990380; 
#=GS D6WG65/1-98       AC D6WG65
#=GS D6WG65/1-98       OS Tribolium castaneum
#=GS D6WG65/1-98       DE Ubiquitin carboxyl-terminal hydrolase
#=GS D6WG65/1-98       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS B3S034/2-98       AC B3S034
#=GS B3S034/2-98       OS Trichoplax adhaerens
#=GS B3S034/2-98       DE Ubiquitin carboxyl-terminal hydrolase
#=GS B3S034/2-98       DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS F6SBG8/5-109      AC F6SBG8
#=GS F6SBG8/5-109      OS Ciona intestinalis
#=GS F6SBG8/5-109      DE Ubiquitin carboxyl-terminal hydrolase
#=GS F6SBG8/5-109      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A369SCB3/2-97   AC A0A369SCB3
#=GS A0A369SCB3/2-97   OS Trichoplax sp. H2
#=GS A0A369SCB3/2-97   DE Ubiquitin carboxyl-terminal hydrolase
#=GS A0A369SCB3/2-97   DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; 
#=GS B4HTK4/1-104      AC B4HTK4
#=GS B4HTK4/1-104      OS Drosophila sechellia
#=GS B4HTK4/1-104      DE Ubiquitin carboxyl-terminal hydrolase
#=GS B4HTK4/1-104      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4PCV0/1-104      AC B4PCV0
#=GS B4PCV0/1-104      OS Drosophila yakuba
#=GS B4PCV0/1-104      DE Ubiquitin carboxyl-terminal hydrolase
#=GS B4PCV0/1-104      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4QP23/1-104      AC B4QP23
#=GS B4QP23/1-104      OS Drosophila simulans
#=GS B4QP23/1-104      DE Ubiquitin carboxyl-terminal hydrolase
#=GS B4QP23/1-104      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B3NF32/1-105      AC B3NF32
#=GS B3NF32/1-105      OS Drosophila erecta
#=GS B3NF32/1-105      DE Ubiquitin carboxyl-terminal hydrolase
#=GS B3NF32/1-105      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A1W2W2I0/3-111  AC A0A1W2W2I0
#=GS A0A1W2W2I0/3-111  OS Ciona intestinalis
#=GS A0A1W2W2I0/3-111  DE Ubiquitin carboxyl-terminal hydrolase
#=GS A0A1W2W2I0/3-111  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GF SQ 10
Q9VZU7/1-106              --MEELRKHLSKVNVPCASGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFLGFGEAYVREYADKTGNRVFLHIQRVKTIKEGADMEAEC-AESE---AGPERKITRLAIGV------------
D6WG65/1-98               --MELLTPHLSSVRVPTATSK----VYKDECVFSFDNPETETGLYVGLKSFFGLGRDYVEKHFHKTGEAVYLHIRRVRHEVSSP-------PQGD----GPEKKITRLAIGVDGG---------
B3S034/2-98               --AVSLDAYLDRIRIPTAMDK----VYKAECCYSFDTPVSDGGLYVCMSNFLSFGRNYVERYFKKTGHNIFLHLKKVAKPLNDA-------ESGDEIESPPKKKPIRLAI--------------
F6SBG8/5-109              PDTDLLVPLLPCVRVPGLGDN----VYKEECCFSFDTPKSDDGLYICLSTFLGFNRKYVELFHETTGHKLFLHMKQIKKILPKS-------EEASPVE---KKKPKRLAIGIEGGFDAA-----
A0A369SCB3/2-97           --AVSLDAYLDRIRIPTAMDK----VYKAECCYSFDTPVSDGGLYVCMSNFLSFGRNYVERYFKKTGHNIFLHLKKVAKPLKDA-------ESGDEIESPPKKKPIRLA---------------
B4HTK4/1-104              --MEELRKHLSKVNVPCVSGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFLGFGEAYVREYANKTGNRIFLHIQRVKTIKEGADMDAD--AESE---AGPERKITRLAIG-------------
B4PCV0/1-104              --MEELRKHLSKVNVPCASGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFLGFGEAYVREYADKTGNRVFLHIQRVKTPKEGADTEAECDPESE---AGPERKITRLA---------------
B4QP23/1-104              --MEELRKHLSKVNVPCVSGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFLGFGEGYVREYANKTGNRIFLHIQRVKTIKEGADMDAD--AESE---AGPERKITRLAIG-------------
B3NF32/1-105              --MEELRKHLSKVNVPCASGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFLGFGEAYVREYADKTGNRVFLHIQRVKTPKEGTDTEAECDPESE---AGPERKITRLAI--------------
A0A1W2W2I0/3-111          -DTDLLVPLLPCVRVPGLGDN----VYKEECCFSFDTPKSDDGLYICLSTFLGFNRKYVELFHETTGHKLFLHMKQIKKILPKS-------EEASPVE---KKKPKRLAIGIEGGFDAANGEKI
#=GC scorecons            0045393459447579454541111799599479795945449997774597676539953634699545899556754443451011100455501123457944999531000000000000
#=GC scorecons_70         _____*___*__*_**_________***_**_****_*____******__*****__**__*___**___***___*_________________________**__***_______________
#=GC scorecons_80         _____*___*__*_**__________**_**_****_*____******__**_*___**______**___***___*__________________________*__***_______________
#=GC scorecons_90         _____*___*_____*__________**_**__*_*_*____***_____*______**______**___***______________________________*__***_______________
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