# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/000660
#=GF DE RING/U-box superfamily protein
#=GF AC 3.30.40.10/FF/000660
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 72.024
#=GS Q9M022/128-193      AC Q9M022
#=GS Q9M022/128-193      OS Arabidopsis thaliana
#=GS Q9M022/128-193      DE E3 ubiquitin-protein ligase AIRP2
#=GS Q9M022/128-193      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9M022/128-193      DR GO; GO:0004842; GO:0005515; GO:0005829; GO:0006511; GO:0009651; GO:0009737; GO:0009789; GO:0061630; 
#=GS Q9M022/128-193      DR EC; 2.3.2.27; 
#=GS Q8L8N5/125-191      AC Q8L8N5
#=GS Q8L8N5/125-191      OS Arabidopsis thaliana
#=GS Q8L8N5/125-191      DE RING/U-box superfamily protein
#=GS Q8L8N5/125-191      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8L8N5/125-191      DR GO; GO:0005829; GO:0061630; GO:0071215; GO:1902584; 
#=GS A0A178U9T4/128-193  AC A0A178U9T4
#=GS A0A178U9T4/128-193  OS Arabidopsis thaliana
#=GS A0A178U9T4/128-193  DE AtAIRP2
#=GS A0A178U9T4/128-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A178U9T4/128-193  DR EC; 2.3.2.27; 
#=GS A0A1P8BG05/91-157   AC A0A1P8BG05
#=GS A0A1P8BG05/91-157   OS Arabidopsis thaliana
#=GS A0A1P8BG05/91-157   DE RING/U-box superfamily protein
#=GS A0A1P8BG05/91-157   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS B9DF79/110-176      AC B9DF79
#=GS B9DF79/110-176      OS Arabidopsis thaliana
#=GS B9DF79/110-176      DE AT5G58787 protein
#=GS B9DF79/110-176      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A178UQ04/125-191  AC A0A178UQ04
#=GS A0A178UQ04/125-191  OS Arabidopsis thaliana
#=GS A0A178UQ04/125-191  DE Uncharacterized protein
#=GS A0A178UQ04/125-191  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0EBI2/6-58         AC A0EBI2
#=GS A0EBI2/6-58         OS Paramecium tetraurelia
#=GS A0EBI2/6-58         DE Uncharacterized protein
#=GS A0EBI2/6-58         DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS V4LFM0/125-192      AC V4LFM0
#=GS V4LFM0/125-192      OS Eutrema salsugineum
#=GS V4LFM0/125-192      DE Uncharacterized protein
#=GS V4LFM0/125-192      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A0D3AZA6/124-190  AC A0A0D3AZA6
#=GS A0A0D3AZA6/124-190  OS Brassica oleracea var. oleracea
#=GS A0A0D3AZA6/124-190  DE Uncharacterized protein
#=GS A0A0D3AZA6/124-190  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS D7M6I2/127-193      AC D7M6I2
#=GS D7M6I2/127-193      OS Arabidopsis lyrata subsp. lyrata
#=GS D7M6I2/127-193      DE Zinc finger family protein
#=GS D7M6I2/127-193      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS M4CN94/124-190      AC M4CN94
#=GS M4CN94/124-190      OS Brassica rapa subsp. pekinensis
#=GS M4CN94/124-190      DE Uncharacterized protein
#=GS M4CN94/124-190      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A078FDX2/124-190  AC A0A078FDX2
#=GS A0A078FDX2/124-190  OS Brassica napus
#=GS A0A078FDX2/124-190  DE BnaA03g00330D protein
#=GS A0A078FDX2/124-190  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A3P6AI76/124-190  AC A0A3P6AI76
#=GS A0A3P6AI76/124-190  OS Brassica oleracea
#=GS A0A3P6AI76/124-190  DE Uncharacterized protein
#=GS A0A3P6AI76/124-190  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; 
#=GS A0A397ZYB7/124-190  AC A0A397ZYB7
#=GS A0A397ZYB7/124-190  OS Brassica rapa
#=GS A0A397ZYB7/124-190  DE Uncharacterized protein
#=GS A0A397ZYB7/124-190  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; 
#=GS A0A3P5ZZZ0/124-190  AC A0A3P5ZZZ0
#=GS A0A3P5ZZZ0/124-190  OS Brassica rapa
#=GS A0A3P5ZZZ0/124-190  DE Uncharacterized protein
#=GS A0A3P5ZZZ0/124-190  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; 
#=GF SQ 15
Q9M022/128-193              -DRTDKGKMSEIDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSG-
Q8L8N5/125-191              YRKKDESEMSEIEIEREEECGICME-MNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSG-
A0A178U9T4/128-193          -DRTDKGKMSEIDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSG-
A0A1P8BG05/91-157           YRKKDESEMSEIEIEREEECGICME-MNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSG-
B9DF79/110-176              YRKKDESEMSEIEIEREEECGICME-MNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSG-
A0A178UQ04/125-191          YRKKDESEMSEIEIEREEECGICME-MNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSG-
A0EBI2/6-58                 -------ERQTRFQSKAEECGICYNTIDQQGQLDSCNHSFCLACIQQWSNIENTCPLCKQ---------
V4LFM0/125-192              YRKKDETEKSEIEIEREEECGICME-MNSMVVLPNCTHSLCLKCYRDWRERSQSCPFCRDSLKRVESGD
A0A0D3AZA6/124-190          YRRTEKGKMSEVDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRDWRLRSQSCPFCRGSLKRVNSG-
D7M6I2/127-193              KDRTEKGKMSEIDLEREEECGICLE-IQNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSG-
M4CN94/124-190              YRRTEKGKMSEVDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRDWRLRSQSCPFCRGSLKRVNSG-
A0A078FDX2/124-190          YRRTEKGKMSEVDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRDWRLRSQSCPFCRGSLKRVNSG-
A0A3P6AI76/124-190          YRRTEKGKMSEVDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRDWRLRSQSCPFCRGSLKRVNSG-
A0A397ZYB7/124-190          YRRTEKGKMSEVDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRDWRLRSQSCPFCRGSLKRVNSG-
A0A3P5ZZZ0/124-190          YRRTEKGKMSEVDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRDWRLRSQSCPFCRGSLKRVNSG-
#=GC scorecons              344343365664446769999994606446659659699596496759635666997974555553550
#=GC scorecons_70           _________**___*********_*_*_____*__****_**_*_*_**__********__________
#=GC scorecons_80           _______________*_******_________*__*_**_*__*___*______**_**__________
#=GC scorecons_90           _________________******_________*__*_**_*__*___*______**_*___________
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