# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/000658
#=GF DE E3 ubiquitin-protein ligase APD2
#=GF AC 3.30.40.10/FF/000658
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.229
#=GS Q6DBH0/384-443      AC Q6DBH0
#=GS Q6DBH0/384-443      OS Arabidopsis thaliana
#=GS Q6DBH0/384-443      DE E3 ubiquitin-protein ligase APD2
#=GS Q6DBH0/384-443      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q6DBH0/384-443      DR GO; GO:0000278; GO:0004842; GO:0005515; GO:0005768; GO:0009555; GO:0009705; GO:0016567; 
#=GS Q6DBH0/384-443      DR EC; 2.3.2.27; 
#=GS Q0WS06/366-440      AC Q0WS06
#=GS Q0WS06/366-440      OS Arabidopsis thaliana
#=GS Q0WS06/366-440      DE E3 ubiquitin-protein ligase APD1
#=GS Q0WS06/366-440      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q0WS06/366-440      DR GO; GO:0000278; GO:0005768; GO:0009555; GO:0009705; 
#=GS Q0WS06/366-440      DR EC; 2.3.2.27; 
#=GS Q8T0T5/250-318      AC Q8T0T5
#=GS Q8T0T5/250-318      OS Drosophila melanogaster
#=GS Q8T0T5/250-318      DE GH09066p
#=GS Q8T0T5/250-318      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8T0T5/250-318      DR GO; GO:0008270; 
#=GS F4IS08/372-446      AC F4IS08
#=GS F4IS08/372-446      OS Arabidopsis thaliana
#=GS F4IS08/372-446      DE RING/U-box superfamily protein
#=GS F4IS08/372-446      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4IS08/372-446      DR GO; GO:0000278; 
#=GS B3H754/344-404      AC B3H754
#=GS B3H754/344-404      OS Arabidopsis thaliana
#=GS B3H754/344-404      DE E3 ubiquitin-protein ligase APD3
#=GS B3H754/344-404      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS B3H754/344-404      DR GO; GO:0000278; GO:0005768; GO:0009555; GO:0009705; 
#=GS B3H754/344-404      DR EC; 2.3.2.27; 
#=GS F4ISV9/339-399      AC F4ISV9
#=GS F4ISV9/339-399      OS Arabidopsis thaliana
#=GS F4ISV9/339-399      DE E3 ubiquitin-protein ligase APD4
#=GS F4ISV9/339-399      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4ISV9/339-399      DR GO; GO:0000278; GO:0005768; GO:0009555; GO:0009705; 
#=GS F4ISV9/339-399      DR EC; 2.3.2.27; 
#=GS A0A178U8I6/384-443  AC A0A178U8I6
#=GS A0A178U8I6/384-443  OS Arabidopsis thaliana
#=GS A0A178U8I6/384-443  DE APD2
#=GS A0A178U8I6/384-443  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A178U8I6/384-443  DR EC; 2.3.2.27; 
#=GS O80444/48-123       AC O80444
#=GS O80444/48-123       OS Arabidopsis thaliana
#=GS O80444/48-123       DE At2g38190
#=GS O80444/48-123       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A3P5ZVM4/385-444  AC A0A3P5ZVM4
#=GS A0A3P5ZVM4/385-444  OS Brassica oleracea
#=GS A0A3P5ZVM4/385-444  DE Uncharacterized protein
#=GS A0A3P5ZVM4/385-444  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; 
#=GS A0A1J3FRW7/385-444  AC A0A1J3FRW7
#=GS A0A1J3FRW7/385-444  OS Noccaea caerulescens
#=GS A0A1J3FRW7/385-444  DE E3 ubiquitin-protein ligase rififylin
#=GS A0A1J3FRW7/385-444  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS R0GW63/254-313      AC R0GW63
#=GS R0GW63/254-313      OS Capsella rubella
#=GS R0GW63/254-313      DE Uncharacterized protein
#=GS R0GW63/254-313      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7M718/384-443      AC D7M718
#=GS D7M718/384-443      OS Arabidopsis lyrata subsp. lyrata
#=GS D7M718/384-443      DE Protein binding protein
#=GS D7M718/384-443      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A078F9S7/384-443  AC A0A078F9S7
#=GS A0A078F9S7/384-443  OS Brassica napus
#=GS A0A078F9S7/384-443  DE BnaA03g00360D protein
#=GS A0A078F9S7/384-443  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS M4CN97/384-443      AC M4CN97
#=GS M4CN97/384-443      OS Brassica rapa subsp. pekinensis
#=GS M4CN97/384-443      DE Uncharacterized protein
#=GS M4CN97/384-443      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A0D3AZA9/385-444  AC A0A0D3AZA9
#=GS A0A0D3AZA9/385-444  OS Brassica oleracea var. oleracea
#=GS A0A0D3AZA9/385-444  DE Uncharacterized protein
#=GS A0A0D3AZA9/385-444  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GF SQ 15
Q6DBH0/384-443              --------------EGHSS--TRYLCAICYDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRKKIRKVKKIFN-
Q0WS06/366-440              -ANDDADLEEFMGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYT-
Q8T0T5/250-318              VSRLWKTMRE-CPAVEKLA--TDELCKICMDAPIECVFLECGHMATCTSCGKVLNE----CPICRQYIVRVVRFFR-
F4IS08/372-446              -ANDDADLEEFMGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYT-
B3H754/344-404              --------------DVEAS--NKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIYTA
F4ISV9/339-399              --------------DVEAS--NKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIYTA
A0A178U8I6/384-443          --------------EGHSS--TRYLCAICYDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRKKIRKVKKIFN-
O80444/48-123               YANDDADLEEFMGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYT-
A0A3P5ZVM4/385-444          --------------DGQSS--TRYLCAICFDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRRKIRKVKKIFN-
A0A1J3FRW7/385-444          --------------EAHSS--TRYLCAICFDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRRKIRKVKKIFN-
R0GW63/254-313              --------------EGHSS--TRYLCAICYDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRRKIRKVKKIFN-
D7M718/384-443              --------------EGHSS--TRYLCAICYDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRKKIRKVKKIFN-
A0A078F9S7/384-443          --------------DGQSS--TRYLCAICFDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRRKIRKVKKIFN-
M4CN97/384-443              --------------DGQSS--TRYLCAICFDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRRKIRKVKKIFN-
A0A0D3AZA9/385-444          --------------DGQSS--TRYLCAICFDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRRKIRKVKKIFN-
#=GC scorecons              00000000010000555470056399799696968959949995759559974647436299799666469677750
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#=GC scorecons_90           ________________________**_**_*_*__*_**_***___*__**_________**_**_____*______
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