# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/000650
#=GF DE Homeobox protein HAT3.1
#=GF AC 3.30.40.10/FF/000650
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.642
#=GS A0A2K3D1W7/2029-2104  AC A0A2K3D1W7
#=GS A0A2K3D1W7/2029-2104  OS Chlamydomonas reinhardtii
#=GS A0A2K3D1W7/2029-2104  DE Uncharacterized protein
#=GS A0A2K3D1W7/2029-2104  DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; 
#=GS A8JDS9/568-643        AC A8JDS9
#=GS A8JDS9/568-643        OS Chlamydomonas reinhardtii
#=GS A8JDS9/568-643        DE Predicted protein
#=GS A8JDS9/568-643        DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; 
#=GS A0A2K1KWH3/181-263    AC A0A2K1KWH3
#=GS A0A2K1KWH3/181-263    OS Physcomitrella patens
#=GS A0A2K1KWH3/181-263    DE Uncharacterized protein
#=GS A0A2K1KWH3/181-263    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A9S7Y2/329-411        AC A9S7Y2
#=GS A9S7Y2/329-411        OS Physcomitrella patens
#=GS A9S7Y2/329-411        DE Predicted protein
#=GS A9S7Y2/329-411        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS H3GBP2/134-196        AC H3GBP2
#=GS H3GBP2/134-196        OS Phytophthora ramorum
#=GS H3GBP2/134-196        DE Uncharacterized protein
#=GS H3GBP2/134-196        DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A0A1D6MAV0/191-263    AC A0A1D6MAV0
#=GS A0A1D6MAV0/191-263    OS Zea mays
#=GS A0A1D6MAV0/191-263    DE Homeobox2
#=GS A0A1D6MAV0/191-263    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A150FUR7/1642-1717  AC A0A150FUR7
#=GS A0A150FUR7/1642-1717  OS Gonium pectorale
#=GS A0A150FUR7/1642-1717  DE Uncharacterized protein
#=GS A0A150FUR7/1642-1717  DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium; Gonium pectorale; 
#=GS A0A368QG06/196-268    AC A0A368QG06
#=GS A0A368QG06/196-268    OS Setaria italica
#=GS A0A368QG06/196-268    DE Uncharacterized protein
#=GS A0A368QG06/196-268    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Cenchrinae; Setaria; Setaria italica; 
#=GS A0A1Q1BFZ7/163-235    AC A0A1Q1BFZ7
#=GS A0A1Q1BFZ7/163-235    OS Zea mays
#=GS A0A1Q1BFZ7/163-235    DE Putative homeodomain-like transcription factor superfamily protein
#=GS A0A1Q1BFZ7/163-235    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1X8NNB6/163-235    AC A0A1X8NNB6
#=GS A0A1X8NNB6/163-235    OS Zea mays
#=GS A0A1X8NNB6/163-235    DE Uncharacterized protein
#=GS A0A1X8NNB6/163-235    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A3L6E7M0/191-263    AC A0A3L6E7M0
#=GS A0A3L6E7M0/191-263    OS Zea mays
#=GS A0A3L6E7M0/191-263    DE Homeobox protein HOX1A
#=GS A0A3L6E7M0/191-263    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6MAV9/191-263    AC A0A1D6MAV9
#=GS A0A1D6MAV9/191-263    OS Zea mays
#=GS A0A1D6MAV9/191-263    DE Homeobox protein HAT3.1
#=GS A0A1D6MAV9/191-263    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1X8C5H4/162-234    AC A0A1X8C5H4
#=GS A0A1X8C5H4/162-234    OS Zea mays
#=GS A0A1X8C5H4/162-234    DE Uncharacterized protein
#=GS A0A1X8C5H4/162-234    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1Q1C161/162-234    AC A0A1Q1C161
#=GS A0A1Q1C161/162-234    OS Zea mays
#=GS A0A1Q1C161/162-234    DE Homeobox1
#=GS A0A1Q1C161/162-234    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1Q1BG28/162-234    AC A0A1Q1BG28
#=GS A0A1Q1BG28/162-234    OS Zea mays
#=GS A0A1Q1BG28/162-234    DE Homeobox2
#=GS A0A1Q1BG28/162-234    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1X8NPE4/162-234    AC A0A1X8NPE4
#=GS A0A1X8NPE4/162-234    OS Zea mays
#=GS A0A1X8NPE4/162-234    DE Uncharacterized protein
#=GS A0A1X8NPE4/162-234    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GF SQ 16
A0A2K3D1W7/2029-2104          ----PAELFDEEGELEEHHIFCAVCYSYEMADDDDVVLCDG-PCNCAFHQNCLDPPVDVTKLPE-DEGWLCPACDCKADILD---
A8JDS9/568-643                ----PAELFDEEGELEEHHIFCAVCYSYEMADDDDVVLCDG-PCNCAFHQNCLDPPVDVTKLPE-DEGWLCPACDCKADILD---
A0A2K1KWH3/181-263            -GSLDENAFDAEGRVYHEEIFCAKCRSQDALPDNDIILCDG-ACNRGFHQYCLDPPLATINIPPGDEGWLCPVCECKMECIEVIN
A9S7Y2/329-411                -GSLDENAFDAEGRVYHEEIFCAKCRSQDALPDNDIILCDG-ACNRGFHQYCLDPPLATINIPPGDEGWLCPVCECKMECIEVIN
H3GBP2/134-196                -------VF--------EEVHCSRCGSTDIEPDNDILLCDSIGCHRAYHQQCQTPFVLTANIPAGAEPWFCEVC------LAVF-
A0A1D6MAV0/191-263            KGKIDESLFDSEGEISCEDIFCATCGSKNATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
A0A150FUR7/1642-1717          ----PAELFDEEGELEEHHIFCATCYSYEMADDDDVILCDG-PCNCAFHQNCLDPPIDVSKLPE-DEGWLCPACDCKADILD---
A0A368QG06/196-268            KGKIDESLFDSEGEISCEDIFCANCGSKDVTLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPEGDEGWLCPAC-----------
A0A1Q1BFZ7/163-235            KGKIDESLFDSEGEISCEDIFCATCGSKNATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
A0A1X8NNB6/163-235            KGKIDESLFDSEGEISCEDIFCATCGSKNATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
A0A3L6E7M0/191-263            KGKIDESLFDSEGEISCEDIFCATCGSKNATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
A0A1D6MAV9/191-263            KGKIDESLFDSEGEISCEDIFCATCGSKNATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
A0A1X8C5H4/162-234            KGKIDETLFDSEGEISCEDIFCSTCGSNDATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
A0A1Q1C161/162-234            KGKIDETLFDSEGEISCEDIFCSTCGSNDATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
A0A1Q1BG28/162-234            KGKIDESLFDSEGEISCEDIFCATCGSKNATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
A0A1X8NPE4/162-234            KGKIDESLFDSEGEISCEDIFCATCGSKNATLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC-----------
#=GC scorecons                1322443696366543365879749493554366976999705956689959759763635693479797976911101011000
#=GC scorecons_70             ________**_**____*_****_*_*______********__*___***_**_**__*__**__*********___________
#=GC scorecons_80             ________*__________***__*_*_______**_****__*___***_**_**______*__*******_*___________
#=GC scorecons_90             ________*__________*_*__*_*_______*__***___*___***_*__*_______*___*_*_*__*___________
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