# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/000606
#=GF DE Ubiquitinyl hydrolase 1
#=GF AC 3.30.40.10/FF/000606
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 53.010
#=GS Q0J0M6/60-203       AC Q0J0M6
#=GS Q0J0M6/60-203       OS Oryza sativa Japonica Group
#=GS Q0J0M6/60-203       DE Ubiquitinyl hydrolase 1
#=GS Q0J0M6/60-203       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A2K2D2U8/148-280  AC A0A2K2D2U8
#=GS A0A2K2D2U8/148-280  OS Brachypodium distachyon
#=GS A0A2K2D2U8/148-280  DE Ubiquitinyl hydrolase 1
#=GS A0A2K2D2U8/148-280  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A1D6ESQ1/49-195   AC A0A1D6ESQ1
#=GS A0A1D6ESQ1/49-195   OS Zea mays
#=GS A0A1D6ESQ1/49-195   DE Ubiquitinyl hydrolase 1
#=GS A0A1D6ESQ1/49-195   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS C5X4P2/49-192       AC C5X4P2
#=GS C5X4P2/49-192       OS Sorghum bicolor
#=GS C5X4P2/49-192       DE Ubiquitinyl hydrolase 1
#=GS C5X4P2/49-192       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS A0A0D9XFD7/60-206   AC A0A0D9XFD7
#=GS A0A0D9XFD7/60-206   OS Leersia perrieri
#=GS A0A0D9XFD7/60-206   DE Ubiquitinyl hydrolase 1
#=GS A0A0D9XFD7/60-206   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; 
#=GS J3MYZ2/54-200       AC J3MYZ2
#=GS J3MYZ2/54-200       OS Oryza brachyantha
#=GS J3MYZ2/54-200       DE Ubiquitinyl hydrolase 1
#=GS J3MYZ2/54-200       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; 
#=GS A0A0D3H8M7/60-203   AC A0A0D3H8M7
#=GS A0A0D3H8M7/60-203   OS Oryza barthii
#=GS A0A0D3H8M7/60-203   DE Ubiquitinyl hydrolase 1
#=GS A0A0D3H8M7/60-203   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; 
#=GS A0A0E0B4Z6/60-203   AC A0A0E0B4Z6
#=GS A0A0E0B4Z6/60-203   OS Oryza glumipatula
#=GS A0A0E0B4Z6/60-203   DE Ubiquitinyl hydrolase 1
#=GS A0A0E0B4Z6/60-203   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS A0A0E0E8P2/55-198   AC A0A0E0E8P2
#=GS A0A0E0E8P2/55-198   OS Oryza meridionalis
#=GS A0A0E0E8P2/55-198   DE Ubiquitinyl hydrolase 1
#=GS A0A0E0E8P2/55-198   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS A0A0E0QTF2/60-203   AC A0A0E0QTF2
#=GS A0A0E0QTF2/60-203   OS Oryza rufipogon
#=GS A0A0E0QTF2/60-203   DE Ubiquitinyl hydrolase 1
#=GS A0A0E0QTF2/60-203   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A0E0M328/57-202   AC A0A0E0M328
#=GS A0A0E0M328/57-202   OS Oryza punctata
#=GS A0A0E0M328/57-202   DE Ubiquitinyl hydrolase 1
#=GS A0A0E0M328/57-202   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; 
#=GS A0A0E0IM24/61-204   AC A0A0E0IM24
#=GS A0A0E0IM24/61-204   OS Oryza sativa f. spontanea
#=GS A0A0E0IM24/61-204   DE Ubiquitinyl hydrolase 1
#=GS A0A0E0IM24/61-204   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; 
#=GS I1I9L4/43-175       AC I1I9L4
#=GS I1I9L4/43-175       OS Brachypodium distachyon
#=GS I1I9L4/43-175       DE Ubiquitinyl hydrolase 1
#=GS I1I9L4/43-175       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A2K2D2T6/43-175   AC A0A2K2D2T6
#=GS A0A2K2D2T6/43-175   OS Brachypodium distachyon
#=GS A0A2K2D2T6/43-175   DE Ubiquitinyl hydrolase 1
#=GS A0A2K2D2T6/43-175   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A0Q3HRN0/42-176   AC A0A0Q3HRN0
#=GS A0A0Q3HRN0/42-176   OS Brachypodium distachyon
#=GS A0A0Q3HRN0/42-176   DE Ubiquitinyl hydrolase 1
#=GS A0A0Q3HRN0/42-176   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS I1IRJ7/43-176       AC I1IRJ7
#=GS I1IRJ7/43-176       OS Brachypodium distachyon
#=GS I1IRJ7/43-176       DE Ubiquitinyl hydrolase 1
#=GS I1IRJ7/43-176       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A2K2D2V8/148-280  AC A0A2K2D2V8
#=GS A0A2K2D2V8/148-280  OS Brachypodium distachyon
#=GS A0A2K2D2V8/148-280  DE Ubiquitinyl hydrolase 1
#=GS A0A2K2D2V8/148-280  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A2Z2V5/63-206       AC A2Z2V5
#=GS A2Z2V5/63-206       OS Oryza sativa Indica Group
#=GS A2Z2V5/63-206       DE Ubiquitinyl hydrolase 1
#=GS A2Z2V5/63-206       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GF SQ 18
Q0J0M6/60-203               -SGREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKK---GGGKEKGGKQQQKKKGGGTKGSAAK--AKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAVP---
A0A2K2D2U8/148-280          -SDWQQCGHYGRDSPHLDKVLREIMSSKHLASCEHCREDAPRKK-GGK---------QQKKKGG---GGAAKAQAKVEKSDMWICLDCGRHFCGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIEMPIVDTVV------
A0A1D6ESQ1/49-195           -NGREHCGHYGRDNAHLDKVLLEILSSKHVASCEHCREDAPRKK-GGAGSREKGG--KQKKKGGASKGATAKAQAKADTSHTWVCLDCGRHFCGGAADDTKPYGHARRHAKQDRHWWAARYDDPTVAYCLSCEKEVSVEMPKLETVVAPAV--
C5X4P2/49-192               -SGREHCGHYGHDNAHLDKVLLEILSSKHVASCEHCREDAPRKK-GGA-----VG--KQKKKGGTSKGATAKAQAKADKSDTWVCLDCGRHFCGGAVVDTKPYGHARRHAKQDRHWWAARYDDPTVAYCLSCEKEVSIEMPKLETVVAAAVED
A0A0D9XFD7/60-206           -SGREQCGHYGGDSAKLDMILLEIMSSKHFASCEHCRDDAPRKKGGGGGGKEKGGK-QQKKKGGGPKGATAKKQAKAQKSDIWVCLDCGRHFCGGEVDMSKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAA----
J3MYZ2/54-200               -SGREQCGHYGGDIARLDKVLLEIMSSKHFASCEHCRDDMPRKK-GGGGGKEKGGK-QQKRKGGGQKGAAAKGQAKAQKSDMWVCLDCGRQFCGGEVDMTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAVP---
A0A0D3H8M7/60-203           -SGREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKK---GGGKEKGGKQQQKKKGGGTKGSAAK--AKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVVFCLSCEKEVSIEMPRIETVAAVP---
A0A0E0B4Z6/60-203           -SGREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKK---GGGKEKGGKQQQKKKGGGTKGSAAK--AKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAVP---
A0A0E0E8P2/55-198           -SGREQCGHYGGDSARLDKVLLEIMMSKHFASCEHCRDDAPRKK---GGGKEKGGKQQQKKKGGGTKGSAAK--AKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAVP---
A0A0E0QTF2/60-203           -SGREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKK---GGGKEKGGKQQQKKKGGGTKGSAAK--AKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAVP---
A0A0E0M328/57-202           -SGREQCGHYGGDSTHLDKVLLEIMTSKHFASCEHCRDDAPRKK-GGGGGKEKGGKQQQKKKGGGTKGAAAK--AKVEKIDMWVCLDCGRHFCGGEVDMTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIKMPRIETVAAVP---
A0A0E0IM24/61-204           -SGREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKK---GGGKEKGGKQQQKKKGGGTKGSAAK--AKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAVP---
I1I9L4/43-175               -SDWQQCGHYGRDSPHLDKVLREIMSSKHLASCEHCREDAPRKK-GGK---------QQKKKGG---GGAAKAQAKVEKSDMWICLDCGRHFCGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIEMPIVDTVV------
A0A2K2D2T6/43-175           -SDWQQCGHYGRDSPHLDKVLREIMSSKHLASCEHCREDAPRKK-GGK---------QQKKKGG---GGAAKAQAKVEKSDMWICLDCGRHFCGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIEMPIVDTVV------
A0A0Q3HRN0/42-176           ASDWEQCGHYSRDNPHLDKVLLDFMSSKHVASCEHCRDDGPRKK-GGK---------QQKKKGG---GGAAKTQAKVEKSDMWICLDCGRHFCGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIEMPIVESVVA-----
I1IRJ7/43-176               -SDWEQCGHYSRDNPHLDKVLLDFMSSKHVASCEHCRDDGPRKK-GGK---------QQKKKGG---GGAAKTQAKVEKSDMWICLDCGRHFCGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIEMPIVESVVA-----
A0A2K2D2V8/148-280          -SDWQQCGHYGRDSPHLDKVLREIMSSKHLASCEHCREDAPRKK-GGK---------QQKKKGG---GGAAKAQAKVEKSDMWICLDCGRHFCGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIEMPIVDTVV------
A2Z2V5/63-206               -SGREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKK---GGGKEKGGKQQQKKKGGGTKGSAAK--AKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAVP---
#=GC scorecons              086577999975966699889587769995999999979799990444222222311799899921395799239967888797999999899995854899999999999999999999797999879999966998899467796422000
#=GC scorecons_70           _*__*******_*__******_***_***_**************_____________*******___*_***__*********************_*__**********************************__******_****_______
#=GC scorecons_80           _*___******_*___*****_***_***_*******_*_****_____________*******___*_***__**__***_*_***********_*__***********************_**********__******__***_______
#=GC scorecons_90           _*____****__*___*****_*___***_*******_*_****______________******___*__**__**___**_*_***********_*__*********************_*_****_*****__******____*_______
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