# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/000586
#=GF DE Traf3, isoform A
#=GF AC 3.30.40.10/FF/000586
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 94.715
#=GS Q8IR14/34-90      AC Q8IR14
#=GS Q8IR14/34-90      OS Drosophila melanogaster
#=GS Q8IR14/34-90      DE RE66324p
#=GS Q8IR14/34-90      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8IR14/34-90      DR GO; GO:0005737; GO:1904504; 
#=GS Q960H6/23-68      AC Q960H6
#=GS Q960H6/23-68      OS Drosophila melanogaster
#=GS Q960H6/23-68      DE LP08566p
#=GS Q960H6/23-68      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q960H6/23-68      DR GO; GO:0005737; 
#=GS A7RGK7/142-198    AC A7RGK7
#=GS A7RGK7/142-198    OS Nematostella vectensis
#=GS A7RGK7/142-198    DE Predicted protein
#=GS A7RGK7/142-198    DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS W4XJ86/223-278    AC W4XJ86
#=GS W4XJ86/223-278    OS Strongylocentrotus purpuratus
#=GS W4XJ86/223-278    DE Uncharacterized protein
#=GS W4XJ86/223-278    DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS D2A1W5/2-59       AC D2A1W5
#=GS D2A1W5/2-59       OS Tribolium castaneum
#=GS D2A1W5/2-59       DE Uncharacterized protein
#=GS D2A1W5/2-59       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS B4M1S0/24-80      AC B4M1S0
#=GS B4M1S0/24-80      OS Drosophila virilis
#=GS B4M1S0/24-80      DE Uncharacterized protein
#=GS B4M1S0/24-80      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS A0A0M3QZD0/26-82  AC A0A0M3QZD0
#=GS A0A0M3QZD0/26-82  OS Drosophila busckii
#=GS A0A0M3QZD0/26-82  DE Traf-like
#=GS A0A0M3QZD0/26-82  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS B4JKM7/18-74      AC B4JKM7
#=GS B4JKM7/18-74      OS Drosophila grimshawi
#=GS B4JKM7/18-74      DE GH12698
#=GS B4JKM7/18-74      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS Q29GI2/36-91      AC Q29GI2
#=GS Q29GI2/36-91      OS Drosophila pseudoobscura pseudoobscura
#=GS Q29GI2/36-91      DE Uncharacterized protein, isoform A
#=GS Q29GI2/36-91      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4NEU9/31-87      AC B4NEU9
#=GS B4NEU9/31-87      OS Drosophila willistoni
#=GS B4NEU9/31-87      DE Uncharacterized protein
#=GS B4NEU9/31-87      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS A0A3B0K3I4/41-97  AC A0A3B0K3I4
#=GS A0A3B0K3I4/41-97  OS Drosophila guanche
#=GS A0A3B0K3I4/41-97  DE Blast:TNF receptor-associated factor 3
#=GS A0A3B0K3I4/41-97  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B3N0R7/36-92      AC B3N0R7
#=GS B3N0R7/36-92      OS Drosophila ananassae
#=GS B3N0R7/36-92      DE Uncharacterized protein, isoform A
#=GS B3N0R7/36-92      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4PXT2/28-84      AC B4PXT2
#=GS B4PXT2/28-84      OS Drosophila yakuba
#=GS B4PXT2/28-84      DE Traf3, isoform A
#=GS B4PXT2/28-84      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4IF77/29-85      AC B4IF77
#=GS B4IF77/29-85      OS Drosophila sechellia
#=GS B4IF77/29-85      DE GM13439
#=GS B4IF77/29-85      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A0Q9XJC9/22-77  AC A0A0Q9XJC9
#=GS A0A0Q9XJC9/22-77  OS Drosophila mojavensis
#=GS A0A0Q9XJC9/22-77  DE Uncharacterized protein, isoform B
#=GS A0A0Q9XJC9/22-77  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B3NX40/28-84      AC B3NX40
#=GS B3NX40/28-84      OS Drosophila erecta
#=GS B3NX40/28-84      DE Uncharacterized protein, isoform A
#=GS B3NX40/28-84      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4L8S0/22-77      AC B4L8S0
#=GS B4L8S0/22-77      OS Drosophila mojavensis
#=GS B4L8S0/22-77      DE Uncharacterized protein, isoform A
#=GS B4L8S0/22-77      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS A0A1W4VU73/25-81  AC A0A1W4VU73
#=GS A0A1W4VU73/25-81  OS Drosophila ficusphila
#=GS A0A1W4VU73/25-81  DE TNF receptor-associated factor 3 isoform X1
#=GS A0A1W4VU73/25-81  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0R3P705/40-95  AC A0A0R3P705
#=GS A0A0R3P705/40-95  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3P705/40-95  DE Uncharacterized protein, isoform B
#=GS A0A0R3P705/40-95  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GF SQ 19
Q8IR14/34-90              ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNGCQAF-IPRIRMRSHLKECPRN
Q960H6/23-68              -----------YITPLWMRLQ---EH-LIHCGQVLEECPNGCQAF-IPRIRMRSHLKECPRN
A7RGK7/142-198            VSKCKWRIVSCHFCTEMYTYKDGKTH-MKSCKRLPIECVNKCGAKDIPREEMPFHMSE----
W4XJ86/223-278            HNNCPARLLECTFCQQSVAYKSLNQHQLLLCPRYAIDGP-LCGKVGIIREDMPKHTD-----
D2A1W5/2-59               --DRHRNPFTCYFCHEKIENETEMGH-TSVCGNVLIPCPNKCGSY-VPRMEMPLHKKECLNR
B4M1S0/24-80              ---IKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCNVF-IPRIRMRSHLKECPRS
A0A0M3QZD0/26-82          ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCHVF-IPRIRMRSHLKECPRS
B4JKM7/18-74              ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCNVF-IPRIRMRSHLKECPRS
Q29GI2/36-91              ----KYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCQVF-IPRIRMRSHLKECPRS
B4NEU9/31-87              ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCQAF-IPRIRMRSHLKECPRN
A0A3B0K3I4/41-97          ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCQVF-IPRIRMRSHLKECPRS
B3N0R7/36-92              ---VKYEKSSCLFCNEWFEAQTFTEH-LIHCGQVLEECSNGCQAF-IPRIRMRSHLKECPRS
B4PXT2/28-84              ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNGCQAF-IPRIRMRSHLKECPRN
B4IF77/29-85              ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNGCQAF-IPRIRMRSHLKECPRN
A0A0Q9XJC9/22-77          ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCNVF-IPRIRMRSHLKECQR-
B3NX40/28-84              ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNGCQAF-IPRIRMRSHLKECPRN
B4L8S0/22-77              ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCNVF-IPRIRMRSHLKECQR-
A0A1W4VU73/25-81          ---VKYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNGCQAF-IPRIRMRSHLKECPRN
A0A0R3P705/40-95          ----KYEKSSCLFCNEWFDAQTFTEH-LIHCGQVLEECPNSCQVF-IPRIRMRSHLKECPRS
#=GC scorecons            00024343347477464444643359064495555467663944408694595495564332
#=GC scorecons_70         __________*_**___________*_*__*_____****_*____***__*__*__*____
#=GC scorecons_80         __________*_**___________*____*__________*____*_*__*__*_______
#=GC scorecons_90         _________________________*____*__________*____*_*__*__*_______
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