# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/000562
#=GF DE RING-type E3 ubiquitin transferase
#=GF AC 3.30.40.10/FF/000562
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 87.413
#=GS Q54C21/756-845      AC Q54C21
#=GS Q54C21/756-845      OS Dictyostelium discoideum
#=GS Q54C21/756-845      DE ATP-dependent DNA helicase
#=GS Q54C21/756-845      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS A9SNT2/303-377      AC A9SNT2
#=GS A9SNT2/303-377      OS Physcomitrella patens
#=GS A9SNT2/303-377      DE Predicted protein
#=GS A9SNT2/303-377      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A0A2K1J3V8/392-466  AC A0A2K1J3V8
#=GS A0A2K1J3V8/392-466  OS Physcomitrella patens
#=GS A0A2K1J3V8/392-466  DE Uncharacterized protein
#=GS A0A2K1J3V8/392-466  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A0A2K1IFI7/269-343  AC A0A2K1IFI7
#=GS A0A2K1IFI7/269-343  OS Physcomitrella patens
#=GS A0A2K1IFI7/269-343  DE Uncharacterized protein
#=GS A0A2K1IFI7/269-343  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A9RMY9/246-320      AC A9RMY9
#=GS A9RMY9/246-320      OS Physcomitrella patens
#=GS A9RMY9/246-320      DE Predicted protein
#=GS A9RMY9/246-320      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A9RI76/287-359      AC A9RI76
#=GS A9RI76/287-359      OS Physcomitrella patens
#=GS A9RI76/287-359      DE Predicted protein
#=GS A9RI76/287-359      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A0A2K1IVG7/287-359  AC A0A2K1IVG7
#=GS A0A2K1IVG7/287-359  OS Physcomitrella patens
#=GS A0A2K1IVG7/287-359  DE Uncharacterized protein
#=GS A0A2K1IVG7/287-359  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS Q0TYP6/867-961      AC Q0TYP6
#=GS Q0TYP6/867-961      OS Parastagonospora nodorum SN15
#=GS Q0TYP6/867-961      DE Uncharacterized protein
#=GS Q0TYP6/867-961      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; 
#=GS K3XEZ4/147-222      AC K3XEZ4
#=GS K3XEZ4/147-222      OS Setaria italica
#=GS K3XEZ4/147-222      DE RING-type E3 ubiquitin transferase
#=GS K3XEZ4/147-222      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Cenchrinae; Setaria; Setaria italica; 
#=GS V7BTV0/290-364      AC V7BTV0
#=GS V7BTV0/290-364      OS Phaseolus vulgaris
#=GS V7BTV0/290-364      DE RING-type E3 ubiquitin transferase
#=GS V7BTV0/290-364      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; 
#=GS I1M1P9/290-364      AC I1M1P9
#=GS I1M1P9/290-364      OS Glycine max
#=GS I1M1P9/290-364      DE RING-type E3 ubiquitin transferase
#=GS I1M1P9/290-364      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A1S3VKS2/290-364  AC A0A1S3VKS2
#=GS A0A1S3VKS2/290-364  OS Vigna radiata var. radiata
#=GS A0A1S3VKS2/290-364  DE RING-type E3 ubiquitin transferase
#=GS A0A1S3VKS2/290-364  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; 
#=GS A0A151S6A8/289-363  AC A0A151S6A8
#=GS A0A151S6A8/289-363  OS Cajanus cajan
#=GS A0A151S6A8/289-363  DE RING-type E3 ubiquitin transferase
#=GS A0A151S6A8/289-363  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; 
#=GS A0A1D6N5E0/351-426  AC A0A1D6N5E0
#=GS A0A1D6N5E0/351-426  OS Zea mays
#=GS A0A1D6N5E0/351-426  DE RING-type E3 ubiquitin transferase
#=GS A0A1D6N5E0/351-426  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A0L9VFG1/290-364  AC A0A0L9VFG1
#=GS A0A0L9VFG1/290-364  OS Vigna angularis
#=GS A0A0L9VFG1/290-364  DE RING-type E3 ubiquitin transferase
#=GS A0A0L9VFG1/290-364  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; 
#=GS A0A2T8IJ58/325-399  AC A0A2T8IJ58
#=GS A0A2T8IJ58/325-399  OS Panicum hallii
#=GS A0A2T8IJ58/325-399  DE RING-type E3 ubiquitin transferase
#=GS A0A2T8IJ58/325-399  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; 
#=GS A0A1E5VYD3/147-221  AC A0A1E5VYD3
#=GS A0A1E5VYD3/147-221  OS Dichanthelium oligosanthes
#=GS A0A1E5VYD3/147-221  DE RING-type E3 ubiquitin transferase
#=GS A0A1E5VYD3/147-221  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Dichantheliinae; Dichanthelium; Dichanthelium oligosanthes; 
#=GS A0A445GQU8/290-364  AC A0A445GQU8
#=GS A0A445GQU8/290-364  OS Glycine soja
#=GS A0A445GQU8/290-364  DE RING-type E3 ubiquitin transferase
#=GS A0A445GQU8/290-364  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GS A0A3L6SSB8/229-303  AC A0A3L6SSB8
#=GS A0A3L6SSB8/229-303  OS Panicum miliaceum
#=GS A0A3L6SSB8/229-303  DE RING-type E3 ubiquitin transferase
#=GS A0A3L6SSB8/229-303  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; 
#=GS I1MEV7/290-364      AC I1MEV7
#=GS I1MEV7/290-364      OS Glycine max
#=GS I1MEV7/290-364      DE RING-type E3 ubiquitin transferase
#=GS I1MEV7/290-364      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GF SQ 20
Q54C21/756-845              PIQKLEEKQQALFDSTIPIYFLCPISQKIMEHPYVAPDGYTFERSSILEWFDKRGAISFVTKRPFSTSAILIPNRNLKAQIQEWKNSHPP-------
A9SNT2/303-377              ---------------LAPEELRCPISLQLMSEPVIVASGQTYERVCIEKWFREGHVTCPKTRQTLAHLN-LTPNYCVKGLIASWCDAHNIP------
A0A2K1J3V8/392-466          ---------------LAPEELRCPISLQLMSEPVIVASGQTYERVCIEKWFREGHVTCPKTRQTLAHLN-LTPNYCVKGLIASWCDAHNIP------
A0A2K1IFI7/269-343          ----------------PPDEFRCPISLDLMRDPVIVASGQTYDRVSISKWIEENHTTCPKSGQKLGHLN-LIPNYALRSLITQWCEDNHVP-----F
A9RMY9/246-320              ----------------PPDEFRCPISLDLMRDPVIVASGQTYDRVSISKWIEENHTTCPKSGQKLGHLN-LIPNYALRSLITQWCEDNHVP-----F
A9RI76/287-359              ----------------PPDEFRCPISLDLMRDPVIVATGQTYDRISISKWIEAGHLTCPKSGQKLGHVN-LIPNYALRSLISQWCEDYHI-------
A0A2K1IVG7/287-359          ----------------PPDEFRCPISLDLMRDPVIVATGQTYDRVSISKWIEAGHPTCPKSGQKLGHVN-LIPNYALRSLISQWCEDYHI-------
Q0TYP6/867-961              IPMKLQQGATSRLDFRVPREYCCHIGSEIMDDPVITEDNFTYERRNIERWFQSNE-TSPLTNLVLSNLD-LRPNLPMREKIAQYLRGADITSKYQDL
K3XEZ4/147-222              ---------------PIPADFCCPLSLELMSDPVIVASGQTYERVFIKKWLDLGYNVCPKTRQTLGHTN-LIPNYTVKQLIENWSEIHGIV-----L
V7BTV0/290-364              ---------------TVPKDFSCPISLDLMRDPVIISTGQTYDRSSISRWMEEGHTTCPKTGQMLAHTR-LVPNRALRNLIVQWCTAHGVP------
I1M1P9/290-364              ---------------TVPKDFCCPISLDLMRDPVIISTGQTYDRSSISRWMEEGHTTCPKTGQMLAHTR-LVPNRALRNLIVKWCTAHGVP------
A0A1S3VKS2/290-364          ---------------TVPKDFSCPISLDLMRDPVIISTGQTYDRSSISRWMEEGHTTCPKTGQLLAHTR-LVPNRALRNLIVQWCTAHGVP------
A0A151S6A8/289-363          ---------------TVPKDFCCPISLDLMRDPVIISTGQTYDRSSISRWMEEGHTTCPKTGQMLANTR-LVPNRALRNLIVQWCTAHGVP------
A0A1D6N5E0/351-426          ---------------PIPADFCCPLSLELMSDPVIVASGQTYERVFIRKWLDLGYNVCPKTRQTLGHSN-LIPNYTVKQLIENWSEVHGVV-----L
A0A0L9VFG1/290-364          ---------------TVPKDFSCPISLDLMRDPVIISTGQTYDRSSISRWMEEGHTTCPKTGQLLAHTR-LVPNRALRNLIVQWCTAHGVP------
A0A2T8IJ58/325-399          ---------------PIPADFCCPLSLELMSDPVIVASGQTYERVFIRKWLDLGYNVCPKTRQTLGHTN-LIPNYTVKQLIENWSEIHGIM------
A0A1E5VYD3/147-221          ---------------PIPADFCCPLSLELMSDPVIVASGQTYERVFIRKWLDLGYNVCPKTRQTLGHTN-LIPNYTVKQLIENWSEIHGIM------
A0A445GQU8/290-364          ---------------TVPKDFCCPISLDLMRDPVIISTGQTYDRSSISRWMEEGHTTCPKTGQILAHTR-LVLNRALRNLIVQWCTAHGVP------
A0A3L6SSB8/229-303          ---------------PIPADFCCPFSLELMSDPVIVASGQTYERVFIRKWLDLGYYVCPKTRQTLGRTS-LIPNYTVKQLIENWSEIHGIM------
I1MEV7/290-364              ---------------TVPKDFCCPISLDLMRDPVIISTGQTYDRSSISRWMEEGHTTCPKTGQILAHTR-LVLNRALRNLIVQWCTAHGVP------
#=GC scorecons              0000000000000002593674976765794797855576987944946955365367767463856440958944673693574436463000000
#=GC scorecons_70           _________________*__*_*****_**_****___******__*_**_______**_*_*_*_____*_**___*_**__*_____________
#=GC scorecons_80           _________________*__*_**_*__**_****___*_**_*__*__*________*_*___*_____*_**______*__*_____________
#=GC scorecons_90           _________________*____*______*__*_*_____**_*__*__*______________*_____*__*______*________________
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