# STOCKHOLM 1.0 #=GF ID 3.30.40.10/FF/000502 #=GF DE RING-type E3 ubiquitin transferase #=GF AC 3.30.40.10/FF/000502 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 68.601 #=GS Q9LSA6/2-87 AC Q9LSA6 #=GS Q9LSA6/2-87 OS Arabidopsis thaliana #=GS Q9LSA6/2-87 DE U-box domain-containing protein 29 #=GS Q9LSA6/2-87 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9LSA6/2-87 DR GO; GO:0004842; GO:0009506; GO:0010200; GO:0016567; GO:0070696; #=GS Q9LSA6/2-87 DR EC; 2.3.2.27; #=GS Q058P4/63-136 AC Q058P4 #=GS Q058P4/63-136 OS Arabidopsis thaliana #=GS Q058P4/63-136 DE U-box domain-containing protein 30 #=GS Q058P4/63-136 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q058P4/63-136 DR GO; GO:0061630; GO:0071472; GO:1901001; #=GS Q058P4/63-136 DR EC; 2.3.2.27; #=GS Q9LXE3/10-83 AC Q9LXE3 #=GS Q9LXE3/10-83 OS Arabidopsis thaliana #=GS Q9LXE3/10-83 DE U-box domain-containing protein 28 #=GS Q9LXE3/10-83 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9LXE3/10-83 DR GO; GO:0005515; GO:0010200; #=GS Q9LXE3/10-83 DR EC; 2.3.2.27; #=GS Q9FLF4/2-90 AC Q9FLF4 #=GS Q9FLF4/2-90 OS Arabidopsis thaliana #=GS Q9FLF4/2-90 DE U-box domain-containing protein 27 #=GS Q9FLF4/2-90 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9FLF4/2-90 DR GO; GO:0010200; #=GS Q9FLF4/2-90 DR EC; 2.3.2.27; #=GS A0A178UA46/10-83 AC A0A178UA46 #=GS A0A178UA46/10-83 OS Arabidopsis thaliana #=GS A0A178UA46/10-83 DE RING-type E3 ubiquitin transferase #=GS A0A178UA46/10-83 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A178UA46/10-83 DR EC; 2.3.2.27; #=GS A0A178VJJ8/2-87 AC A0A178VJJ8 #=GS A0A178VJJ8/2-87 OS Arabidopsis thaliana #=GS A0A178VJJ8/2-87 DE RING-type E3 ubiquitin transferase #=GS A0A178VJJ8/2-87 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A178VJJ8/2-87 DR EC; 2.3.2.27; #=GS V4M060/62-136 AC V4M060 #=GS V4M060/62-136 OS Eutrema salsugineum #=GS V4M060/62-136 DE RING-type E3 ubiquitin transferase #=GS V4M060/62-136 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A0D3A9J9/62-136 AC A0A0D3A9J9 #=GS A0A0D3A9J9/62-136 OS Brassica oleracea var. oleracea #=GS A0A0D3A9J9/62-136 DE RING-type E3 ubiquitin transferase #=GS A0A0D3A9J9/62-136 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS A0A087GEZ8/56-129 AC A0A087GEZ8 #=GS A0A087GEZ8/56-129 OS Arabis alpina #=GS A0A087GEZ8/56-129 DE RING-type E3 ubiquitin transferase #=GS A0A087GEZ8/56-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS A0A1J3DC88/2-86 AC A0A1J3DC88 #=GS A0A1J3DC88/2-86 OS Noccaea caerulescens #=GS A0A1J3DC88/2-86 DE RING-type E3 ubiquitin transferase #=GS A0A1J3DC88/2-86 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS R0HMK5/62-136 AC R0HMK5 #=GS R0HMK5/62-136 OS Capsella rubella #=GS R0HMK5/62-136 DE RING-type E3 ubiquitin transferase #=GS R0HMK5/62-136 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A078IWG6/62-135 AC A0A078IWG6 #=GS A0A078IWG6/62-135 OS Brassica napus #=GS A0A078IWG6/62-135 DE RING-type E3 ubiquitin transferase #=GS A0A078IWG6/62-135 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4EMF5/58-131 AC M4EMF5 #=GS M4EMF5/58-131 OS Brassica rapa subsp. pekinensis #=GS M4EMF5/58-131 DE RING-type E3 ubiquitin transferase #=GS M4EMF5/58-131 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS D7LSY5/60-132 AC D7LSY5 #=GS D7LSY5/60-132 OS Arabidopsis lyrata subsp. lyrata #=GS D7LSY5/60-132 DE RING-type E3 ubiquitin transferase #=GS D7LSY5/60-132 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A398ANZ0/58-131 AC A0A398ANZ0 #=GS A0A398ANZ0/58-131 OS Brassica rapa #=GS A0A398ANZ0/58-131 DE RING-type E3 ubiquitin transferase #=GS A0A398ANZ0/58-131 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; #=GS D7M274/7-80 AC D7M274 #=GS D7M274/7-80 OS Arabidopsis lyrata subsp. lyrata #=GS D7M274/7-80 DE RING-type E3 ubiquitin transferase #=GS D7M274/7-80 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A078F750/2-89 AC A0A078F750 #=GS A0A078F750/2-89 OS Brassica napus #=GS A0A078F750/2-89 DE RING-type E3 ubiquitin transferase #=GS A0A078F750/2-89 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4E6B4/2-89 AC M4E6B4 #=GS M4E6B4/2-89 OS Brassica rapa subsp. pekinensis #=GS M4E6B4/2-89 DE RING-type E3 ubiquitin transferase #=GS M4E6B4/2-89 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS V4KJL6/2-92 AC V4KJL6 #=GS V4KJL6/2-92 OS Eutrema salsugineum #=GS V4KJL6/2-92 DE RING-type E3 ubiquitin transferase #=GS V4KJL6/2-92 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS D7MRW3/2-89 AC D7MRW3 #=GS D7MRW3/2-89 OS Arabidopsis lyrata subsp. lyrata #=GS D7MRW3/2-89 DE RING-type E3 ubiquitin transferase #=GS D7MRW3/2-89 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A087GE53/2-93 AC A0A087GE53 #=GS A0A087GE53/2-93 OS Arabis alpina #=GS A0A087GE53/2-93 DE RING-type E3 ubiquitin transferase #=GS A0A087GE53/2-93 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS R0GAH4/2-85 AC R0GAH4 #=GS R0GAH4/2-85 OS Capsella rubella #=GS R0GAH4/2-85 DE RING-type E3 ubiquitin transferase #=GS R0GAH4/2-85 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS D7L940/2-86 AC D7L940 #=GS D7L940/2-86 OS Arabidopsis lyrata subsp. lyrata #=GS D7L940/2-86 DE RING-type E3 ubiquitin transferase #=GS D7L940/2-86 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A087G115/2-83 AC A0A087G115 #=GS A0A087G115/2-83 OS Arabis alpina #=GS A0A087G115/2-83 DE RING-type E3 ubiquitin transferase #=GS A0A087G115/2-83 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GF SQ 24 Q9LSA6/2-87 GR-DETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLINIWSDSIGRRHN-------- Q058P4/63-136 ----------DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLHHLIYTWFSQKYV----------- Q9LXE3/10-83 ----------TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLIDHWSDSINR----------- Q9FLF4/2-90 ---RKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSDSVRRRTCVESAE--- A0A178UA46/10-83 ----------TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLIDHWSDSINR----------- A0A178VJJ8/2-87 GR-DETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLINIWSDSIGRRHN-------- V4M060/62-136 ----------DIPSVFICPISLEPMQDPVTLCTGQTYERSNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLHHLIYTWFSQKYVL---------- A0A0D3A9J9/62-136 ----------DIPSVFICPISLEPMQDPVTLCTGQTYERSNIHKWFSLGHLTCPTTMQELWDDAVTPNRTLHHLIYTWFSQKYVL---------- A0A087GEZ8/56-129 ----------EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHCTCPTTMQELWDDLVTPNKTLHQLIYTWFSQKYV----------- A0A1J3DC88/2-86 GR-DETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQVLRTKDFVPNLTLQRLIKAWSDSVGRYA--------- R0HMK5/62-136 ----------DIPSVFICPISLEPMQDPVTLCTGQTYERSNIHKWFNLGHLTCPTTMQELWDDAVTPNKTLHHLIYTWFSQKYVL---------- A0A078IWG6/62-135 ----------DIPSVFICPISLEPMQDPVTLCTGQTYERSNIHKWFSLGHLTCPTTMQELWDDAVTPNRTLHHLIYTWFSQKYV----------- M4EMF5/58-131 ----------DIPSVFICPISLEPMQDPVTLCTGQTYERSNIHKWFSLGHLTCPTTMQELWDDAVTPNRTLHHLIYTWFSQKYV----------- D7LSY5/60-132 ----------DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLHHLIYTWFSQKY------------ A0A398ANZ0/58-131 ----------DIPSVFICPISLEPMQDPVTLCTGQTYERSNIHKWFSLGHLTCPTTMQELWDDAVTPNRTLHHLIYTWFSQKYV----------- D7M274/7-80 ---DIT----TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDGGNNTCPATMQILQNKEFVPNLTLHRLIDLWSDS-------------- A0A078F750/2-89 ---RKDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSDSVRRRASVEPA---- M4E6B4/2-89 ---RKDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSDSVRRRASVEPS---- V4KJL6/2-92 ---RKDDLYITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSDSVRRRTSVESAELA- D7MRW3/2-89 ---RKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSDSVRRRVCVESA---- A0A087GE53/2-93 ---RKDDLYITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSESVRRRSTESSTPTRD R0GAH4/2-85 GRDDETETYITVPSFFKCPISLDVMTSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLNTHDFVPNLTLQRLIHIWSHSLGS----------- D7L940/2-86 GR-DETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLIKIWSDSIGRYN--------- A0A087G115/2-83 GR-DETETYITVPSFFKCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILPTKDFVPNLTLQRLIKVWSDSVG------------ #=GC scorecons 00011111125796694999997595699697995997956967965496499969994935546599499669934955533310000000000 #=GC scorecons_70 ___________***_*_******_*__*******_****_******__**_*******_*______**_******__*_________________ #=GC scorecons_80 ___________**__*_******_*__**_****_****__*_**___*__***_***_*______**_**__**__*_________________ #=GC scorecons_90 ____________*__*_*****__*__**_*_**_**_*__*__*___*__***_***_*______**_**__**__*_________________ //