# STOCKHOLM 1.0 #=GF ID 3.30.40.10/FF/000477 #=GF DE General transcription and DNA repair factor IIH #=GF AC 3.30.40.10/FF/000477 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 85.449 #=GS Q04673/384-460 AC Q04673 #=GS Q04673/384-460 OS Saccharomyces cerevisiae S288C #=GS Q04673/384-460 DE General transcription and DNA repair factor IIH subunit SSL1 #=GS Q04673/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q04673/384-460 DR GO; GO:0000112; GO:0000439; GO:0005675; GO:0006289; GO:0006366; GO:0061630; GO:0070816; #=GS O74995/346-421 AC O74995 #=GS O74995/346-421 OS Schizosaccharomyces pombe 972h- #=GS O74995/346-421 DE General transcription and DNA repair factor IIH subunit ssl1 #=GS O74995/346-421 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; #=GS O74995/346-421 DR GO; GO:0000439; GO:0005634; GO:0005675; GO:0005829; GO:0006367; GO:0016251; #=GS C8V3Z3/351-437 AC C8V3Z3 #=GS C8V3Z3/351-437 OS Aspergillus nidulans FGSC A4 #=GS C8V3Z3/351-437 DE General transcription and DNA repair factor IIH #=GS C8V3Z3/351-437 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; #=GS Q1K578/341-364_407-451 AC Q1K578 #=GS Q1K578/341-364_407-451 OS Neurospora crassa OR74A #=GS Q1K578/341-364_407-451 DE General transcription and DNA repair factor IIH #=GS Q1K578/341-364_407-451 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; #=GS A0A1D9QFI2/369-453 AC A0A1D9QFI2 #=GS A0A1D9QFI2/369-453 OS Sclerotinia sclerotiorum 1980 UF-70 #=GS A0A1D9QFI2/369-453 DE General transcription and DNA repair factor IIH #=GS A0A1D9QFI2/369-453 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; #=GS C4YJA8/395-472 AC C4YJA8 #=GS C4YJA8/395-472 OS Candida albicans WO-1 #=GS C4YJA8/395-472 DE General transcription and DNA repair factor IIH #=GS C4YJA8/395-472 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS Q6C7M6/359-439 AC Q6C7M6 #=GS Q6C7M6/359-439 OS Yarrowia lipolytica CLIB122 #=GS Q6C7M6/359-439 DE General transcription and DNA repair factor IIH #=GS Q6C7M6/359-439 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS Q759D9/393-468 AC Q759D9 #=GS Q759D9/393-468 OS Eremothecium gossypii ATCC 10895 #=GS Q759D9/393-468 DE General transcription and DNA repair factor IIH #=GS Q759D9/393-468 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS R9XB90/394-469 AC R9XB90 #=GS R9XB90/394-469 OS Saccharomycetaceae sp. 'Ashbya aceri' #=GS R9XB90/394-469 DE General transcription and DNA repair factor IIH #=GS R9XB90/394-469 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; #=GS B9WAJ6/424-501 AC B9WAJ6 #=GS B9WAJ6/424-501 OS Candida dubliniensis CD36 #=GS B9WAJ6/424-501 DE General transcription and DNA repair factor IIH #=GS B9WAJ6/424-501 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; #=GS J6ECZ8/385-461 AC J6ECZ8 #=GS J6ECZ8/385-461 OS Saccharomyces kudriavzevii IFO 1802 #=GS J6ECZ8/385-461 DE General transcription and DNA repair factor IIH #=GS J6ECZ8/385-461 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; #=GS A0A0L8VL98/384-460 AC A0A0L8VL98 #=GS A0A0L8VL98/384-460 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VL98/384-460 DE General transcription and DNA repair factor IIH #=GS A0A0L8VL98/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS H0GJY1/384-460 AC H0GJY1 #=GS H0GJY1/384-460 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GJY1/384-460 DE General transcription and DNA repair factor IIH #=GS H0GJY1/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A0A0L8RE51/389-465 AC A0A0L8RE51 #=GS A0A0L8RE51/389-465 OS Saccharomyces eubayanus #=GS A0A0L8RE51/389-465 DE General transcription and DNA repair factor IIH #=GS A0A0L8RE51/389-465 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; #=GS F7VPT1/341-364_404-448 AC F7VPT1 #=GS F7VPT1/341-364_404-448 OS Sordaria macrospora k-hell #=GS F7VPT1/341-364_404-448 DE General transcription and DNA repair factor IIH #=GS F7VPT1/341-364_404-448 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Sordaria; Sordaria macrospora; #=GS A4DA11/352-438 AC A4DA11 #=GS A4DA11/352-438 OS Aspergillus fumigatus Af293 #=GS A4DA11/352-438 DE General transcription and DNA repair factor IIH #=GS A4DA11/352-438 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; #=GS A0A2I1CGG7/342-428 AC A0A2I1CGG7 #=GS A0A2I1CGG7/342-428 OS Aspergillus novofumigatus IBT 16806 #=GS A0A2I1CGG7/342-428 DE General transcription and DNA repair factor IIH #=GS A0A2I1CGG7/342-428 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus novofumigatus; #=GS A0A1D8PGC3/395-472 AC A0A1D8PGC3 #=GS A0A1D8PGC3/395-472 OS Candida albicans SC5314 #=GS A0A1D8PGC3/395-472 DE General transcription and DNA repair factor IIH #=GS A0A1D8PGC3/395-472 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS G2WIJ9/384-460 AC G2WIJ9 #=GS G2WIJ9/384-460 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WIJ9/384-460 DE General transcription and DNA repair factor IIH #=GS G2WIJ9/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS N1P7K2/384-460 AC N1P7K2 #=GS N1P7K2/384-460 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P7K2/384-460 DE General transcription and DNA repair factor IIH #=GS N1P7K2/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LSX8/384-460 AC B3LSX8 #=GS B3LSX8/384-460 OS Saccharomyces cerevisiae RM11-1a #=GS B3LSX8/384-460 DE General transcription and DNA repair factor IIH #=GS B3LSX8/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C7GPF3/384-460 AC C7GPF3 #=GS C7GPF3/384-460 OS Saccharomyces cerevisiae JAY291 #=GS C7GPF3/384-460 DE General transcription and DNA repair factor IIH #=GS C7GPF3/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8ZCX7/384-460 AC C8ZCX7 #=GS C8ZCX7/384-460 OS Saccharomyces cerevisiae EC1118 #=GS C8ZCX7/384-460 DE General transcription and DNA repair factor IIH #=GS C8ZCX7/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A7A0R0/384-460 AC A7A0R0 #=GS A7A0R0/384-460 OS Saccharomyces cerevisiae YJM789 #=GS A7A0R0/384-460 DE General transcription and DNA repair factor IIH #=GS A7A0R0/384-460 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B5VMU6/294-370 AC B5VMU6 #=GS B5VMU6/294-370 OS Saccharomyces cerevisiae AWRI1631 #=GS B5VMU6/294-370 DE YLR005Wp-like protein #=GS B5VMU6/294-370 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A0A1D8NGF4/359-439 AC A0A1D8NGF4 #=GS A0A1D8NGF4/359-439 OS Yarrowia lipolytica #=GS A0A1D8NGF4/359-439 DE General transcription and DNA repair factor IIH #=GS A0A1D8NGF4/359-439 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS B0Y341/352-438 AC B0Y341 #=GS B0Y341/352-438 OS Aspergillus fumigatus A1163 #=GS B0Y341/352-438 DE General transcription and DNA repair factor IIH #=GS B0Y341/352-438 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; #=GS A7EQL3/369-453 AC A7EQL3 #=GS A7EQL3/369-453 OS Sclerotinia sclerotiorum 1980 UF-70 #=GS A7EQL3/369-453 DE General transcription and DNA repair factor IIH #=GS A7EQL3/369-453 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; #=GS A0A0B0E5Y8/341-364_407-451 AC A0A0B0E5Y8 #=GS A0A0B0E5Y8/341-364_407-451 OS Neurospora crassa #=GS A0A0B0E5Y8/341-364_407-451 DE General transcription and DNA repair factor IIH #=GS A0A0B0E5Y8/341-364_407-451 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; #=GF SQ 29 Q04673/384-460 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- O74995/346-421 FPLKNWSEIPWSANPKSTHCFACQLPFPKPPVSP--------FDESTSSMRYACPSCKNHFCLDCDVFAHEQLHECYGCQCSGN---- C8V3Z3/351-437 FPLMNWVEVSWERAHRSTTCFACGIAFPTIPPKEQWQATQNLAKGMSVSSRYECTVCENHFCIDCDLFAHEVVHNCPGCQSRVVRHP- Q1K578/341-364_407-451 FPLKVFVEVPWSQAYKSTACYSC-------------------LKGVSESGRYACQVCGNHFCIDCDVFAHETIHNCPGCQSDTRDVEK A0A1D9QFI2/369-453 FPLRNWVEVLWKDAGKTRACYGCQAPFPRRDEHEK-GAPEPGLKSMSESGRYACEVCGNHFCIDCDVFAHDVVHNCPGCQSDTRGL-- C4YJA8/395-472 VPLAPYKEVKVSPIYDSTYCFGCQLKFPEGVK----LGTHKGTLESMTSSRYRCLKCSQDFCINCDVFVHEVLHNCPGCENN------ Q6C7M6/359-439 FPLAPFIEVPCKNAHKSEFCAGCQSKFPVVAR----DAKNI-QADGSMTSRYECPTCHSHFCIDCDVFCHEILHNCIGCQARSYSL-- Q759D9/393-468 MPLKVFQELPVDIQFPTENCFSCQKKFPRLRNYK--------TQDLLTSSRYRCENCKCDFCIDCDVFVHEILHNCPGCESKAV---- R9XB90/394-469 MPLKVFQELPVDMQFPTENCFSCQKKFPKLRNYK--------TQDLLTSSRYRCENCKCDFCIDCDVFVHEILHNCPGCESRAV---- B9WAJ6/424-501 VPLAPYKEVKVSPIYDSTYCFGCQLKFPEGVK----LGTLKKSLESMTSSRYRCLKCSQDFCINCDVFVHEVLHNCPGCENN------ J6ECZ8/385-461 MPLKTFAEVPTTETFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDIFIHEILHNCPGCESKPVI--- A0A0L8VL98/384-460 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- H0GJY1/384-460 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- A0A0L8RE51/389-465 MPLKTFTEVPTTESFRSEDCFSCQSRFPILKNHK--------NGNLLTSSRYRCEDCGEEFCVDCDVFIHEILHNCPGCESKPVI--- F7VPT1/341-364_404-448 FPLKVFVEVPWSQASRSTACYSC-------------------LKGVSESGRYACQVCGNHFCIDCDVFAHETIHNCPGCQSDTREPER A4DA11/352-438 FPLMNWIEVPWQRASRSLTCFACGIYFPTVPPKDQWQATESQAKGMSVSSRYECTVCKNHFCIDCDLFAHEIVHNCPGCQSGISGLA- A0A2I1CGG7/342-428 FPLMNWVEVPWQRASRSLTCFACGIYFPTVPPKDQWQATESQAKGMSVSSRYECTVCKNHFCIDCDLFAHEVVHNCPGCQSGISGLA- A0A1D8PGC3/395-472 VPLAPYKEVKVSPIYDSTYCFGCQLKFPEGVK----LGTHKGTLESMTSSRYRCLKCSQDFCINCDVFVHEVLHNCPGCENN------ G2WIJ9/384-460 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- N1P7K2/384-460 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- B3LSX8/384-460 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- C7GPF3/384-460 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- C8ZCX7/384-460 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- A7A0R0/384-460 MPLKTFAEVPTTEKFPSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- B5VMU6/294-370 MPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHK--------NGKLLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVI--- A0A1D8NGF4/359-439 FPLAPFIEVPCKNAHKSEFCAGCQSKFPVVAR----DAKNI-QADGSMTSRYECPTCHSHFCIDCDVFCHEILHNCIGCQARSYSL-- B0Y341/352-438 FPLMNWIEVPWQRASRSLTCFACGIYFPTVPPKDQWQATESQAKGMSVSSRYECTVCKNHFCIDCDLFAHEIVHNCPGCQSGISGLA- A7EQL3/369-453 FPLRNWVEVLWKDAGKTRACYGCQAPFPRRDEHEK-GAPEPGLKSMSESGRYACEVCGNHFCIDCDVFAHDVVHNCPGCQSDTRGL-- A0A0B0E5Y8/341-364_407-451 FPLKVFVEVPWSQAYKSTACYSC-------------------LKGVSESGRYACQVCGNHFCIDCDVFAHETIHNCPGCQSDTRDVEK #=GC scorecons 5994454986343445743965953366232322000110003344448699494394459977997949856989799664322100 #=GC scorecons_70 _**____**_______*__**_*___**____________________****_*__*___********_**_*********_______ #=GC scorecons_80 _**____**_______*__*__*_________________________*_**_*__*___**_*****_**__******_________ #=GC scorecons_90 _**____*___________*__*_________________________*_**_*__*___**__**_*_**__***_**_________ //