# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/000459
#=GF DE TFA1p TFIIE large subunit
#=GF AC 3.30.40.10/FF/000459
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 43.079
#=GS P36100/108-169      AC P36100
#=GS P36100/108-169      OS Saccharomyces cerevisiae S288C
#=GS P36100/108-169      DE Transcription initiation factor IIE subunit alpha
#=GS P36100/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P36100/108-169      DR GO; GO:0000993; GO:0001113; GO:0005673; GO:0005739; GO:0006366; GO:0097550; 
#=GS I2H8V1/109-170      AC I2H8V1
#=GS I2H8V1/109-170      OS Tetrapisispora blattae CBS 6284
#=GS I2H8V1/109-170      DE Uncharacterized protein
#=GS I2H8V1/109-170      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora; Tetrapisispora blattae; 
#=GS G0V6E8/108-169      AC G0V6E8
#=GS G0V6E8/108-169      OS Naumovozyma castellii CBS 4309
#=GS G0V6E8/108-169      DE Uncharacterized protein
#=GS G0V6E8/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Naumovozyma; Naumovozyma castellii; 
#=GS A0A1S7HUF9/108-169  AC A0A1S7HUF9
#=GS A0A1S7HUF9/108-169  OS Zygosaccharomyces parabailii
#=GS A0A1S7HUF9/108-169  DE TFA1 (YKL028W)
#=GS A0A1S7HUF9/108-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces parabailii; 
#=GS H2AUF9/108-169      AC H2AUF9
#=GS H2AUF9/108-169      OS Kazachstania africana CBS 2517
#=GS H2AUF9/108-169      DE Uncharacterized protein
#=GS H2AUF9/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kazachstania; Kazachstania africana; 
#=GS G8ZLZ1/108-169      AC G8ZLZ1
#=GS G8ZLZ1/108-169      OS Torulaspora delbrueckii CBS 1146
#=GS G8ZLZ1/108-169      DE Uncharacterized protein
#=GS G8ZLZ1/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Torulaspora; Torulaspora delbrueckii; 
#=GS A7TS52/109-169      AC A7TS52
#=GS A7TS52/109-169      OS Vanderwaltozyma polyspora DSM 70294
#=GS A7TS52/109-169      DE Uncharacterized protein
#=GS A7TS52/109-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Vanderwaltozyma; Vanderwaltozyma polyspora; 
#=GS A0A0W0CN98/108-169  AC A0A0W0CN98
#=GS A0A0W0CN98/108-169  OS [Candida] glabrata
#=GS A0A0W0CN98/108-169  DE Transcription initiation factor IIE subunit alpha
#=GS A0A0W0CN98/108-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; [Candida] glabrata; 
#=GS R9XMA2/108-169      AC R9XMA2
#=GS R9XMA2/108-169      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XMA2/108-169      DE AaceriAGL067Wp
#=GS R9XMA2/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS Q750M4/125-186      AC Q750M4
#=GS Q750M4/125-186      OS Eremothecium gossypii ATCC 10895
#=GS Q750M4/125-186      DE AGL067Wp
#=GS Q750M4/125-186      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS H0GJA1/108-169      AC H0GJA1
#=GS H0GJA1/108-169      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GJA1/108-169      DE Tfa1p
#=GS H0GJA1/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VLY7/108-169  AC A0A0L8VLY7
#=GS A0A0L8VLY7/108-169  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VLY7/108-169  DE TFA1p TFIIE large subunit
#=GS A0A0L8VLY7/108-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS J7S431/108-169      AC J7S431
#=GS J7S431/108-169      OS Kazachstania naganishii CBS 8797
#=GS J7S431/108-169      DE Uncharacterized protein
#=GS J7S431/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kazachstania; Kazachstania naganishii; 
#=GS G0WHW8/108-169      AC G0WHW8
#=GS G0WHW8/108-169      OS Naumovozyma dairenensis CBS 421
#=GS G0WHW8/108-169      DE Uncharacterized protein
#=GS G0WHW8/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Naumovozyma; Naumovozyma dairenensis; 
#=GS A0A1Q3A8Q4/108-169  AC A0A1Q3A8Q4
#=GS A0A1Q3A8Q4/108-169  OS Zygosaccharomyces rouxii
#=GS A0A1Q3A8Q4/108-169  DE Uncharacterized protein
#=GS A0A1Q3A8Q4/108-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces rouxii; 
#=GS A0A212M719/108-169  AC A0A212M719
#=GS A0A212M719/108-169  OS Zygosaccharomyces bailii
#=GS A0A212M719/108-169  DE Probable Transcription initiation factor IIE subunit alpha
#=GS A0A212M719/108-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces bailii; 
#=GS A0A1X7QWN7/110-169  AC A0A1X7QWN7
#=GS A0A1X7QWN7/110-169  OS Kazachstania saulgeensis
#=GS A0A1X7QWN7/110-169  DE Similar to Saccharomyces cerevisiae YKL028W TFA1 TFIIE large subunit, involved in recruitment of RNA polymerase II to the promoter, activation of TFIIH, and promoter opening
#=GS A0A1X7QWN7/110-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kazachstania; Kazachstania saulgeensis; 
#=GS J8TRJ6/108-169      AC J8TRJ6
#=GS J8TRJ6/108-169      OS Saccharomyces kudriavzevii IFO 1802
#=GS J8TRJ6/108-169      DE TFA1-like protein
#=GS J8TRJ6/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS A0A0L8RFR3/108-169  AC A0A0L8RFR3
#=GS A0A0L8RFR3/108-169  OS Saccharomyces eubayanus
#=GS A0A0L8RFR3/108-169  DE TFA1-like protein
#=GS A0A0L8RFR3/108-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS N1P0P6/108-169      AC N1P0P6
#=GS N1P0P6/108-169      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P0P6/108-169      DE Tfa1p
#=GS N1P0P6/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LR55/108-169      AC B3LR55
#=GS B3LR55/108-169      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LR55/108-169      DE Transcription initiation factor IIE alpha subunit
#=GS B3LR55/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZZT5/108-169      AC A6ZZT5
#=GS A6ZZT5/108-169      OS Saccharomyces cerevisiae YJM789
#=GS A6ZZT5/108-169      DE Transcription factor tfIIE large subunit
#=GS A6ZZT5/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GRI8/108-169      AC C7GRI8
#=GS C7GRI8/108-169      OS Saccharomyces cerevisiae JAY291
#=GS C7GRI8/108-169      DE Tfa1p
#=GS C7GRI8/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VMC5/108-169      AC B5VMC5
#=GS B5VMC5/108-169      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VMC5/108-169      DE YKL028Wp-like protein
#=GS B5VMC5/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q6FLN5/108-169      AC Q6FLN5
#=GS Q6FLN5/108-169      OS [Candida] glabrata CBS 138
#=GS Q6FLN5/108-169      DE Uncharacterized protein
#=GS Q6FLN5/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; [Candida] glabrata; 
#=GS C5DQP1/108-169      AC C5DQP1
#=GS C5DQP1/108-169      OS Zygosaccharomyces rouxii CBS 732
#=GS C5DQP1/108-169      DE ZYRO0B01870p
#=GS C5DQP1/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces rouxii; 
#=GS G2WI01/108-169      AC G2WI01
#=GS G2WI01/108-169      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WI01/108-169      DE K7_Tfa1p
#=GS G2WI01/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GXK2/108-169      AC H0GXK2
#=GS H0GXK2/108-169      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GXK2/108-169      DE Tfa1p
#=GS H0GXK2/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS C8ZCD9/108-169      AC C8ZCD9
#=GS C8ZCD9/108-169      OS Saccharomyces cerevisiae EC1118
#=GS C8ZCD9/108-169      DE Tfa1p
#=GS C8ZCD9/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A1S7HHH0/108-169  AC A0A1S7HHH0
#=GS A0A1S7HHH0/108-169  OS Zygosaccharomyces parabailii
#=GS A0A1S7HHH0/108-169  DE TFA1 (YKL028W)
#=GS A0A1S7HHH0/108-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces parabailii; 
#=GS A0A1Q2ZUF6/108-169  AC A0A1Q2ZUF6
#=GS A0A1Q2ZUF6/108-169  OS Zygosaccharomyces rouxii
#=GS A0A1Q2ZUF6/108-169  DE Uncharacterized protein
#=GS A0A1Q2ZUF6/108-169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces rouxii; 
#=GS S6E437/108-169      AC S6E437
#=GS S6E437/108-169      OS Zygosaccharomyces bailii CLIB 213
#=GS S6E437/108-169      DE Genomic, scaffold05
#=GS S6E437/108-169      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces bailii; 
#=GF SQ 32
P36100/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
I2H8V1/109-170              RLKDDLDKNSAPNGYMCPICETKYTQLEAVQLLNYDRTEFLCSLCDEPLIEDDSGKKNKEKQ
G0V6E8/108-169              RLKDDLDKNSAPNGYMCPICSTKYTQLEAVQLLNFDRTEFLCSLCDEPLIEDDSGKKNKEKQ
A0A1S7HUF9/108-169          RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNYDRTEFLCSLCDEPLVEDDSGKKNKEKQ
H2AUF9/108-169              RLKDDLDKNSAPNGYMCPICQTKYTQLEAIQLLNYDRTEFLCSLCDEPLIEDDSGKKNKEKQ
G8ZLZ1/108-169              RLKDDLDKNSAPNGYMCPICSTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A7TS52/109-169              -LKDDLDKFSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A0A0W0CN98/108-169          RMKEDLDKNSEPNGYMCPICLTKYTQLEAIQLLNYERTEFLCSLCDEPLIEDDSGKKNKEKQ
R9XMA2/108-169              KMKDDLDKNSAPQGYMCPICHAKYSQLEAISLLNFEKTQFLCSLCEEPLIEDDSGKKSKEKQ
Q750M4/125-186              KMKDDLDKNSAPQGYMCPVCHAKYSQLEAISLLNFEKTQFLCSLCEEPLIEDDSGKKSKEKQ
H0GJA1/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A0A0L8VLY7/108-169          RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
J7S431/108-169              RLKDDLDKNSAPNGYMCPICETKYTQLEAVQLLNYDRTEFLCSLCDEPLVEDDSGKKNKEKQ
G0WHW8/108-169              RLKDDLDKNSAPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGRKNKEKQ
A0A1Q3A8Q4/108-169          RLKDDLDKNSEPNGYMCPVCETKYTQLEAVQLLNYDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A0A212M719/108-169          RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNYDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A0A1X7QWN7/110-169          --KDDLDKNSAPNGYMCPICLTKYSQLEAVQLLNYDRTEFLCSLCDEPLIEDDSGKKNKEKQ
J8TRJ6/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A0A0L8RFR3/108-169          RLKDDLDKNSEPNGYMCSICETKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
N1P0P6/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
B3LR55/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A6ZZT5/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
C7GRI8/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
B5VMC5/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
Q6FLN5/108-169              RMKEDLDKNSEPNGYMCPICLTKYTQLEAIQLLNYERTEFLCSLCDEPLIEDDSGKKNKEKQ
C5DQP1/108-169              RLKDDFDKNSEPNGYMCPVCLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
G2WI01/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
H0GXK2/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
C8ZCD9/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A0A1S7HHH0/108-169          RLKDDLDNNSEPNGYMCPICLTKYTQLEAVQLLNYDRTEFLCSLCDEPLVEDDSGKKNKEKQ
A0A1Q2ZUF6/108-169          RLKDDFDKNSEPNGYMCPVCLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEDDSGKKNKEKQ
S6E437/108-169              RLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNYDRTEFLCSLCDEPLVEDDSGKKNKEKQ
#=GC scorecons              66989898895969999879479969999769997779799999979997999998979999
#=GC scorecons_70           _*********_*********_*****************************************
#=GC scorecons_80           __********_*_*******_***_*****_******************_*******_****
#=GC scorecons_90           __********_*_*****_*__**_****__***___*_******_***_*******_****
//