# STOCKHOLM 1.0 #=GF ID 3.30.250.20/FF/000002 #=GF DE LINE1 type transposase domain containing 1 #=GF AC 3.30.250.20/FF/000002 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 96.486 #=GS 3sooC01/18-88 AC Q5T7N2 #=GS 3sooC01/18-88 OS Homo sapiens #=GS 3sooC01/18-88 DE LINE-1 type transposase domain-containing protein 1 #=GS 3sooC01/18-88 DR CATH; 3soo; C:251-319; #=GS 3sooC01/18-88 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 3sooC01/18-88 DR GO; GO:0005515; #=GS 3sooB01/18-88 AC Q5T7N2 #=GS 3sooB01/18-88 OS Homo sapiens #=GS 3sooB01/18-88 DE LINE-1 type transposase domain-containing protein 1 #=GS 3sooB01/18-88 DR CATH; 3soo; B:251-319; #=GS 3sooB01/18-88 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 3sooB01/18-88 DR GO; GO:0005515; #=GS 3sooA01/18-88 AC Q5T7N2 #=GS 3sooA01/18-88 OS Homo sapiens #=GS 3sooA01/18-88 DE LINE-1 type transposase domain-containing protein 1 #=GS 3sooA01/18-88 DR CATH; 3soo; A:251-319; #=GS 3sooA01/18-88 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 3sooA01/18-88 DR GO; GO:0005515; #=GS Q5T7N2/799-865 AC Q5T7N2 #=GS Q5T7N2/799-865 OS Homo sapiens #=GS Q5T7N2/799-865 DE LINE-1 type transposase domain-containing protein 1 #=GS Q5T7N2/799-865 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS Q5T7N2/799-865 DR GO; GO:0005515; #=GS Q587J6/717-782 AC Q587J6 #=GS Q587J6/717-782 OS Mus musculus #=GS Q587J6/717-782 DE LINE-1 type transposase domain-containing protein 1 #=GS Q587J6/717-782 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS G3UYN0/783-848 AC G3UYN0 #=GS G3UYN0/783-848 OS Mus musculus #=GS G3UYN0/783-848 DE L1TD1 #=GS G3UYN0/783-848 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS K7E4B1/318-382 AC K7E4B1 #=GS K7E4B1/318-382 OS Monodelphis domestica #=GS K7E4B1/318-382 DE Uncharacterized protein #=GS K7E4B1/318-382 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; #=GS J9P4B5/241-311 AC J9P4B5 #=GS J9P4B5/241-311 OS Canis lupus familiaris #=GS J9P4B5/241-311 DE Uncharacterized protein #=GS J9P4B5/241-311 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; #=GS F6PV35/742-807 AC F6PV35 #=GS F6PV35/742-807 OS Equus caballus #=GS F6PV35/742-807 DE LINE1 type transposase domain containing 1 #=GS F6PV35/742-807 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; #=GS A0A2K6EJI3/248-318 AC A0A2K6EJI3 #=GS A0A2K6EJI3/248-318 OS Propithecus coquereli #=GS A0A2K6EJI3/248-318 DE Uncharacterized protein #=GS A0A2K6EJI3/248-318 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus; Propithecus coquereli; #=GS A0A3Q7SLD9/242-312 AC A0A3Q7SLD9 #=GS A0A3Q7SLD9/242-312 OS Vulpes vulpes #=GS A0A3Q7SLD9/242-312 DE LINE-1 type transposase domain-containing protein 1 #=GS A0A3Q7SLD9/242-312 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes; Vulpes vulpes; #=GS A0A088QCS9/254-324 AC A0A088QCS9 #=GS A0A088QCS9/254-324 OS Lagothrix lagotricha #=GS A0A088QCS9/254-324 DE L1TD1 #=GS A0A088QCS9/254-324 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Lagothrix; Lagothrix lagotricha; #=GS A0A088QTI1/195-265 AC A0A088QTI1 #=GS A0A088QTI1/195-265 OS Saimiri sciureus #=GS A0A088QTI1/195-265 DE L1TD1 #=GS A0A088QTI1/195-265 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri sciureus; #=GS A0A2K5K7T5/801-866 AC A0A2K5K7T5 #=GS A0A2K5K7T5/801-866 OS Colobus angolensis palliatus #=GS A0A2K5K7T5/801-866 DE Uncharacterized protein #=GS A0A2K5K7T5/801-866 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; #=GS M0R3X5/734-800 AC M0R3X5 #=GS M0R3X5/734-800 OS Rattus norvegicus #=GS M0R3X5/734-800 DE Uncharacterized protein #=GS M0R3X5/734-800 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; #=GS G1RY03/799-865 AC G1RY03 #=GS G1RY03/799-865 OS Nomascus leucogenys #=GS G1RY03/799-865 DE Uncharacterized protein #=GS G1RY03/799-865 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; #=GS H2N773/755-821 AC H2N773 #=GS H2N773/755-821 OS Pongo abelii #=GS H2N773/755-821 DE LINE1 type transposase domain containing 1 #=GS H2N773/755-821 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; #=GS A0A2K5MYM9/801-867 AC A0A2K5MYM9 #=GS A0A2K5MYM9/801-867 OS Cercocebus atys #=GS A0A2K5MYM9/801-867 DE Uncharacterized protein #=GS A0A2K5MYM9/801-867 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; #=GS A0A088QCN9/780-845 AC A0A088QCN9 #=GS A0A088QCN9/780-845 OS Mus caroli #=GS A0A088QCN9/780-845 DE L1TD1 #=GS A0A088QCN9/780-845 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus caroli; #=GS H2RD33/798-864 AC H2RD33 #=GS H2RD33/798-864 OS Pan troglodytes #=GS H2RD33/798-864 DE L1TD1 #=GS H2RD33/798-864 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; #=GS G3SIH3/798-864 AC G3SIH3 #=GS G3SIH3/798-864 OS Gorilla gorilla gorilla #=GS G3SIH3/798-864 DE LINE1 type transposase domain containing 1 #=GS G3SIH3/798-864 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; #=GS A0A2K6JPY6/791-857 AC A0A2K6JPY6 #=GS A0A2K6JPY6/791-857 OS Rhinopithecus bieti #=GS A0A2K6JPY6/791-857 DE Uncharacterized protein #=GS A0A2K6JPY6/791-857 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; #=GS F7HBE7/799-865 AC F7HBE7 #=GS F7HBE7/799-865 OS Macaca mulatta #=GS F7HBE7/799-865 DE Uncharacterized protein #=GS F7HBE7/799-865 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; #=GS A0A2K5ZTF3/801-867 AC A0A2K5ZTF3 #=GS A0A2K5ZTF3/801-867 OS Mandrillus leucophaeus #=GS A0A2K5ZTF3/801-867 DE Uncharacterized protein #=GS A0A2K5ZTF3/801-867 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; #=GS A0A096MM93/802-868 AC A0A096MM93 #=GS A0A096MM93/802-868 OS Papio anubis #=GS A0A096MM93/802-868 DE Uncharacterized protein #=GS A0A096MM93/802-868 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; #=GS A0A0D9S741/802-868 AC A0A0D9S741 #=GS A0A0D9S741/802-868 OS Chlorocebus sabaeus #=GS A0A0D9S741/802-868 DE LINE1 type transposase domain containing 1 #=GS A0A0D9S741/802-868 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; #=GS A0A088QCP3/758-823 AC A0A088QCP3 #=GS A0A088QCP3/758-823 OS Mus musculus domesticus #=GS A0A088QCP3/758-823 DE L1TD1 #=GS A0A088QCP3/758-823 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; Mus musculus domesticus; #=GS A0A2R9CJ79/798-864 AC A0A2R9CJ79 #=GS A0A2R9CJ79/798-864 OS Pan paniscus #=GS A0A2R9CJ79/798-864 DE Uncharacterized protein #=GS A0A2R9CJ79/798-864 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; #=GS A0A2K6RBH1/799-865 AC A0A2K6RBH1 #=GS A0A2K6RBH1/799-865 OS Rhinopithecus roxellana #=GS A0A2K6RBH1/799-865 DE Uncharacterized protein #=GS A0A2K6RBH1/799-865 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; #=GS A0A2K6BJF0/800-866 AC A0A2K6BJF0 #=GS A0A2K6BJF0/800-866 OS Macaca nemestrina #=GS A0A2K6BJF0/800-866 DE Uncharacterized protein #=GS A0A2K6BJF0/800-866 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; #=GS A0A2K5UYQ2/802-868 AC A0A2K5UYQ2 #=GS A0A2K5UYQ2/802-868 OS Macaca fascicularis #=GS A0A2K5UYQ2/802-868 DE Uncharacterized protein #=GS A0A2K5UYQ2/802-868 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; #=GS A0A3Q2KZG9/694-759 AC A0A3Q2KZG9 #=GS A0A3Q2KZG9/694-759 OS Equus caballus #=GS A0A3Q2KZG9/694-759 DE LINE1 type transposase domain containing 1 #=GS A0A3Q2KZG9/694-759 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; #=GF SQ 32 3sooC01/18-88 S-ATLDISXQWSNVFNILRENDFEPXFLCEVXLAFXCDGEIXTFSDLQSLRXFASQXSSXXELLXDVLPQXE 3sooB01/18-88 S-ATLDISXQWSNVFNILRENDFEPXFLCEVXLAFXCDGEIXTFSDLQSLRXFASQXSSXXELLXDVLPQXE 3sooA01/18-88 S-ATLDISXQWSNVFNILRENDFEPXFLCEVXLAFXCDGEIXTFSDLQSLRXFASQXSSXXELLXDVLPQXE Q5T7N2/799-865 --DTLDARSKWSNVFKVLLEKGFNPRILYPAKMAFDFRGKTKVFLSIEEFRDYVLHMPTLRELLGNNIP--- Q587J6/717-782 --GTIDARSQWCGIIKILQDEGFQPRILYPAKLAFDFKGKTKIFFDIEEFKKFISDIPYLKDLLNNIH---- G3UYN0/783-848 --GTIDARSQWCGIIKILQDEGFQPRILYPAKLAFDFKGKTKIFFDIEEFKKFISDIPYLKDLLNNIH---- K7E4B1/318-382 SGVTRNKRREWSDIFQKAKELKLKPRMLYPSKLSIILNEEKLIFNKKEAFEEFLKGNPAMSRIFT------- J9P4B5/241-311 S-ATLDVSKQWSNVFNILRENDFEPKVLCQVKLTFKCDGEVRTFSDMQSLSNFTSQKPFMNKLLKGVLPQNE F6PV35/742-807 --DTLDARSKWRNIIRVLQSKGFNPRILYPAILAFDFEGKAKAFFDVKEFRKFAFCTPSLKELLEDII---- A0A2K6EJI3/248-318 S-ATLDISKQWSNVFNILRENDYEPKFLCQVKLAFKCDGEIKEFSDLQSLRKFISQKSSVKELLEDVLPQNE A0A3Q7SLD9/242-312 S-ATLDVSKQWSNVFNILRENDFEPKVLCQVKLTFKCDGEVRTFSDMQSLSNFISQKPFMNKLLKDVLPQNE A0A088QCS9/254-324 S-ATLDISKQWSNVFNILREHDFEPKFLCDVKLAFKCDDEIKTFSDLQSLRNFASQKSSMKELLKDVLLQKE A0A088QTI1/195-265 S-ATLGISKQWSNVFNILREHDFEPKFLCDVKLAFKCDGEIKTFSDLQSLRKFASQKSSMKELLKEVLLQKE A0A2K5K7T5/801-866 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLENNV---- M0R3X5/734-800 P-STIDARSQWSSIIKILQEEGFQPKILYPAKLAFDFKGKTKVFLDIEEFKKFISDIPYLKELFNNMP---- G1RY03/799-865 --DTLDARSKWSNVFKVLLEKGFNPRILYPAKMAFDFRGKTKVFVDIEEFRDYVSHMPTLRELLGNNIL--- H2N773/755-821 --DTLDARSKWSNVFKVLLEKGFNPRILYPAKMAFDFRGKTKVFLTIEEFRDYVLHMPTLRELLGNNIL--- A0A2K5MYM9/801-867 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLEDNVL--- A0A088QCN9/780-845 --GTIDARSQWCGIIKILQDKGFQPRILYPAKLAFDFKGKTKIFFDIEEFKKFISDIPYLKDLLNNIH---- H2RD33/798-864 --DTLDARSKWSNVFKVLLEKGFNPRILYPAKMAFDFRGKTKVFLSIEEFRDYVLHMPALRELLGNNIP--- G3SIH3/798-864 --DTLDARSKWSNVFKVLLEKGFNPRILYPAKMAFDFRGNTKVFLSIEEFRDYVLHMPTLRELLGNNIP--- A0A2K6JPY6/791-857 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLENDVL--- F7HBE7/799-865 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLEDNVL--- A0A2K5ZTF3/801-867 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLEDNVL--- A0A096MM93/802-868 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLEDNVL--- A0A0D9S741/802-868 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLEDDVL--- A0A088QCP3/758-823 --GTIDARSQWCGIIKILQDEGFQPRILYPAKLAFDFKGKTKIFFDIEEFKKFISDIPYLKDLLNNIH---- A0A2R9CJ79/798-864 --DTLDARSKWSNVFKVLLEKGFNPRILYPAKMAFDFRGKTKVFLSIEEFRDYVLHMPALRELLGNNIP--- A0A2K6RBH1/799-865 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLENDVL--- A0A2K6BJF0/800-866 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLEDNVL--- A0A2K5UYQ2/802-868 --DTLDARSKWSNVFKVLLAKGFNPRILYPAKMAFDFRGKTKVFLDVEEFRDYVSHMPTLRELLEDNVL--- A0A3Q2KZG9/694-759 --DTLDARSKWRNIIRVLQSKGFNPRILYPAILAFDFEGKAKAFFDVKEFRKFAFCTPSLKELLEDII---- #=GC scorecons 104968554697676568454585955965656784547655594756566375643645468835342000 #=GC scorecons_70 ___***____*****_**____*_*__**___***___*____*_*_*_**_*____*___***________ #=GC scorecons_80 ___*_*____*__*___*____*_*__*_____**___*____*________*_________**________ #=GC scorecons_90 ___*______*______*____*_*__*______*________*__________________**________ //