# STOCKHOLM 1.0
#=GF ID 3.30.2350.20/FF/000025
#=GF DE tRNA pseudouridine synthase TruD, putative
#=GF AC 3.30.2350.20/FF/000025
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 44.256
#=GS Q38A69/375-601_636-665      AC Q38A69
#=GS Q38A69/375-601_636-665      OS Trypanosoma brucei brucei TREU927
#=GS Q38A69/375-601_636-665      DE Uncharacterized protein
#=GS Q38A69/375-601_636-665      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q38A69/375-601_636-665      DR GO; GO:0005634; 
#=GS Q4Q0I6/408-598_637-664      AC Q4Q0I6
#=GS Q4Q0I6/408-598_637-664      OS Leishmania major
#=GS Q4Q0I6/408-598_637-664      DE Uncharacterized protein
#=GS Q4Q0I6/408-598_637-664      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS A4IDY9/401-598_637-664      AC A4IDY9
#=GS A4IDY9/401-598_637-664      OS Leishmania infantum
#=GS A4IDY9/401-598_637-664      DE tRNA_pseudouridine_synthase_TruD_-_putative
#=GS A4IDY9/401-598_637-664      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS E9AU09/410-597_637-664      AC E9AU09
#=GS E9AU09/410-597_637-664      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AU09/410-597_637-664      DE Uncharacterized protein
#=GS E9AU09/410-597_637-664      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A0A3Q8IJ87/401-598_637-664  AC A0A3Q8IJ87
#=GS A0A3Q8IJ87/401-598_637-664  OS Leishmania donovani
#=GS A0A3Q8IJ87/401-598_637-664  DE tRNA pseudouridine synthase TruD, putative
#=GS A0A3Q8IJ87/401-598_637-664  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9BUV7/401-598_637-664      AC E9BUV7
#=GS E9BUV7/401-598_637-664      OS Leishmania donovani BPK282A1
#=GS E9BUV7/401-598_637-664      DE Uncharacterized protein
#=GS E9BUV7/401-598_637-664      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GF SQ 6
Q38A69/375-601_636-665              FRSKSMVEPSMLAAVDALEKGSFEEAVKLVPHYCHQERDMLNHLVDSPNDFLGSFSKIPRTMSMMYFHAVQSLIWNIMASKRL--EVGVVPQVGDLVLKSRYTARLRCNQQSDCLEGLDLSANEMDDTTEEKERGLPEVVHLTTEDVATGLFQIADILLPVPGPDEKLQYPTVSACDRSAYIETLALKGAESLVRASNPLVKLFHYHGAYRHLVVKPRGFRMRLCNTKSNLPCKAIVVEFSLPPGAYATCVLREFCDCR
Q4Q0I6/408-598_637-664              ---------------------DYAAALQTAPYFCYQERDILKHLSTNPTDYLGSLQTISRTMGMMYFHSVQSLVWNLLASSRLSDKGRAHAEVGDLVLESTYQER--------------VAFRDAQPTPNSDNTKLPATRRLTSED-DCARFGLEDVLLPVPGPDQDLVYPSSIGCTRDDYDAVLAALGIDFASKEALALMKVFHFHGTYRALGVRPKDFSLRAETVMG--PVQVVVATFSLPPGSYATSVLREFC--I
A4IDY9/401-598_637-664              --------------VELFDASDYVAALQAAPYYCYQERDILKHLSTNPNDYLGSLQALSRTMGMMYFHSVQSLVWNLLASSRLSDKGRAHAEVGDLVLESTYQER--------------VAARDAQPTPNFDDSKLPAARRLTSED-DCARFGLEDVLLPIPGPDQDLVYPSSFGCTRDDYDAVLAALGIDFASKEALALMKVFHFHGTYRALGVRPKGFSLRAETVTG--PVQVVVATFSLPPGSYATSVLREFC--I
E9AU09/410-597_637-664              -----------------------AAALQAVPYYCYQERDILKHLSTNPNDYLGSLQAISRTMGMMYFHSVQSLVWNLLASSRLSDKSRAHAEVGDLVFESTYQER--------------VADRDARPTPNSDKSKLPAVRRLTSED-ECAHFGLEDVLLPVPGPDQDLVYPSSIGCTRDDYDAVLAALGINFASKEALALMKVFHFHGTYRALGVRPKEFSLRAE-ITG--PLQVVVATFSLPPGSYATSVLREFC--I
A0A3Q8IJ87/401-598_637-664          --------------VELFDASDYVAALQAAPYYCYQERDILKHLSTNPNDYLGSLQALSRTMGMMYFHSVQSLVWNLLASSRLSDKGRAHAEVGDLVLESTYQER--------------VAARDAQPTPNFDDSKLPAARRLTSED-DCARFGLEDVLLPIPGPDQDLVYPSSFGCTRDDYDAVLAALGIDFASKEALALMKVFHFHGTYRALGVRPKGFSLRAETVTG--PVQVVVATFSLPPGSYATSVLREFC--I
E9BUV7/401-598_637-664              --------------VELFDASDYVAALQAAPYYCYQERDILKHLSTNPNDYLGSLQALSRTMGMMYFHSVQSLVWNLLASSRLSDKGRAHAEVGDLVLESTYQER--------------VAARDAQPTPNFDDSKLPAARRLTSED-DCARFGLEDVLLPIPGPDQDLVYPSSFGCTRDDYDAVLAALGIDFASKEALALMKVFHFHGTYRALGVRPKGFSLRAETVTG--PVQVVVATFSLPPGSYATSVLREFC--I
#=GC scorecons                      0000000000000032122123434955459689699996959944597979995446599959999959999699569949933535545599999759494490000000000000055456444955254349944459959904453945496999699995594995435949549445994495544464545959599799599494969669469433435009355695499999959995999999004
#=GC scorecons_70                   _________________________*____***********_**___*******_____***_*****_*******_***_**_________******_*_*__*__________________*___*_______**____**_**_____*___**********__*_**____*_*__*___**__*_____*____*_*_*****_**_*_****_*_**________*___**__******_***_******___
#=GC scorecons_80                   _________________________*____*_**_****_*_**___***_***_____***_*****_****_**__**_**_________******_*_*__*______________________*_______**____**_**_____*___*_***_****__*_**____*_*__*___**__*__________*_*_**_**_**_*_*_*__*__*________*____*__******_***_******___
#=GC scorecons_90                   _________________________*____*_**_****_*_**___*_*_***_____***_*****_****_**__**_**_________*****__*_*__*______________________*_______**____**_**_____*___*_***_****__*_**____*_*__*___**__*__________*_*_**_**_**_*_*_*__*__*________*____*__******_***_******___
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