# STOCKHOLM 1.0
#=GF ID 3.30.2350.20/FF/000014
#=GF DE tRNA pseudouridine synthase D (TruD)
#=GF AC 3.30.2350.20/FF/000014
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 88.535
#=GS Q9VSK9/182-389        AC Q9VSK9
#=GS Q9VSK9/182-389        OS Drosophila melanogaster
#=GS Q9VSK9/182-389        DE GH24787p
#=GS Q9VSK9/182-389        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS D6WWF9/140-340        AC D6WWF9
#=GS D6WWF9/140-340        OS Tribolium castaneum
#=GS D6WWF9/140-340        DE Pseudouridylate synthase 7 homolog-like Protein
#=GS D6WWF9/140-340        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS Q5TRG0/170-352        AC Q5TRG0
#=GS Q5TRG0/170-352        OS Anopheles gambiae
#=GS Q5TRG0/170-352        DE AGAP005743-PA
#=GS Q5TRG0/170-352        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS E9GIQ1/41-69_175-333  AC E9GIQ1
#=GS E9GIQ1/41-69_175-333  OS Daphnia pulex
#=GS E9GIQ1/41-69_175-333  DE Uncharacterized protein
#=GS E9GIQ1/41-69_175-333  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS A2EJH2/10-38_107-275  AC A2EJH2
#=GS A2EJH2/10-38_107-275  OS Trichomonas vaginalis
#=GS A2EJH2/10-38_107-275  DE Uncharacterized protein
#=GS A2EJH2/10-38_107-275  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A0A177WF88/46-228     AC A0A177WF88
#=GS A0A177WF88/46-228     OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WF88/46-228     DE tRNA pseudouridine synthase D (TruD), variant
#=GS A0A177WF88/46-228     DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS A0A182K647/159-344    AC A0A182K647
#=GS A0A182K647/159-344    OS Anopheles christyi
#=GS A0A182K647/159-344    DE Uncharacterized protein
#=GS A0A182K647/159-344    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles christyi; 
#=GS B4HJJ3/186-389        AC B4HJJ3
#=GS B4HJJ3/186-389        OS Drosophila sechellia
#=GS B4HJJ3/186-389        DE GM25058
#=GS B4HJJ3/186-389        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4QM33/190-388        AC B4QM33
#=GS B4QM33/190-388        OS Drosophila simulans
#=GS B4QM33/190-388        DE GD14097
#=GS B4QM33/190-388        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A2FUM2/11-39_107-268  AC A2FUM2
#=GS A2FUM2/11-39_107-268  OS Trichomonas vaginalis
#=GS A2FUM2/11-39_107-268  DE Uncharacterized protein
#=GS A2FUM2/11-39_107-268  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A0A177WGD1/279-459    AC A0A177WGD1
#=GS A0A177WGD1/279-459    OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WGD1/279-459    DE tRNA pseudouridine synthase D (TruD)
#=GS A0A177WGD1/279-459    DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS A0A177WE94/46-228     AC A0A177WE94
#=GS A0A177WE94/46-228     OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WE94/46-228     DE tRNA pseudouridine synthase D (TruD), variant
#=GS A0A177WE94/46-228     DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS F4NZK4/239-419        AC F4NZK4
#=GS F4NZK4/239-419        OS Batrachochytrium dendrobatidis JAM81
#=GS F4NZK4/239-419        DE Uncharacterized protein
#=GS F4NZK4/239-419        DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS F4NZU6/239-419        AC F4NZU6
#=GS F4NZU6/239-419        OS Batrachochytrium dendrobatidis JAM81
#=GS F4NZU6/239-419        DE Uncharacterized protein
#=GS F4NZU6/239-419        DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS A0A177WF60/279-459    AC A0A177WF60
#=GS A0A177WF60/279-459    OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WF60/279-459    DE tRNA pseudouridine synthase D (TruD)
#=GS A0A177WF60/279-459    DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GF SQ 15
Q9VSK9/182-389                KPKVQEEASLENKDAAEGETSTQKDSQVPAEEKKTIKVFK-PKPGRGDKR--WSFPA-DYVTFLVHKTNLVTSDVASTLAARLNLRPSQVNYSGIKDKRAKTTQKFSVKRRTPESILVAARSQRNVHIGNFGFESNTLKLGDLQGNRFRIALRHIAKEK-------REEIEQALQSLKERGFINYYGLQRFGNSASVPTYEVGVALLKHDYKLACELIL---
D6WWF9/140-340                ------------HKSLKKYFGGKISANTETKNDKKFMVFK-KHDGKIDNRSNWPSDKGEFVHFLVYKECLDTLDTALRIASCLKMPPAHFSYAGVKDRRAKTTQWFSVKRVEPWKLMVKTRPIRNVKIGNITFKDKPLKLGDLTGNKFRIALRNVTGDD--------DLIEKSLKSLQDKGFVNYYGLQRFGNDKEVPTFSVGIQLLLGNWKEACDIILKLT
Q5TRG0/170-352                --------------------------TVTEGDRKLIRITKYSKSMTRDRREKWQWPH-PYTYFLLYKENLDTIQATMQLGQKLFCAPSVLTYAGTKDRRAKTTQWMCIKTREPAKIVAAARHIPNVSVGNFTFKPDTLKLGQLQGNRFRIALRQVTASD--------DTINACLEAFREKGFINYYGLQRFGNSAAVPTYKIGIEMLKGNWKGACDLI----
E9GIQ1/41-69_175-333          ---------------GISEYICK-GPGFSAILKQRYSDFQ-VHEIDNEKR----RMGCIYTQFVLYKENLSTMEAVNTIARALKTKAGNLMTAGTKDKRAITSQLVTLKNTEPLKILNSVRNNPKIAVGNFAFTKQPLQLGNLKGNRFIIVLRNVIGDE--------SQILANLESLKEVGFINYYGSQRFG-TRHVPTHYIGKQLILGRWQKAIDLI----
A2EJH2/10-38_107-275          ---------------GITEYNND-FAGMNGIIKHRYSDFH-VHEIDQTRR----RPRPMVISMVICKENTNQQESISKLSKKLNIKKNQIGIAGNKDKRAITTQVMTIRDVGINSLEQLANLTDKIKCGMFYQAMNPVNLGDLNGNHFTLVLRNLTIPGCETVEELREGLKIRMEALSEKGFINYFGMQRFG-TTAMSTHTIGIAILRKEWQKVIDMIMS--
A0A177WF88/46-228             ----------------------EFQKLKRGINKKRPSKPV-SSKVDFNDL------GGNYCHFTLYKENIDTMQAIAKISKSIRVPSKQFTFSGTKDKRAITTQRISVLNVRPSVLLGVNKLLGTSRIGDLSYHNTRLMLGSLSGNHFSIVLRNVEAQS-------DQVIHQSMQSFKQNGFINYYGMQRFG-TRSVSTHSVGIALLAEKWEQAIDLIMC--
A0A182K647/159-344            ------------------------GSTVAEGDRKFIKITKYTKSMTRDRREKWQWPH-PYTYFLLYKENLDTIQATMQLGQKMFCAPSVLTYAGTKDRRAKTTQWMCIKTREPAKIAAAARHIPNVSVGNFTFKPDTLKLGQLQGNRFRIALRQVTASD--------ETINSCMEEFRVKGFINYYGLQRFGNSATVPTYKIGIEMLKGNWKEACDLIL---
B4HJJ3/186-389                ----REEASLENKDAAEGETSTQEDSQVPAEEKKTIKVFK-PKQGRGDKR--WSFPA-DYVTFLVHKTNLVTSDVASTLAARLNLRPSQVNYSGIKDKRAKTTQKFSVKRRTPESILVAARSQRNVNIGNFGFESNTLKLGDLQGNRFRIALRHIAKKK-------REEIEQALQSLKGRGFINYYGLQRFGNSASVPTYEVGVALLKNDYKLACELIL---
B4QM33/190-388                ---------LENKDAAEGETSTQEDSQVPAEEKKTIKVFK-PKPGRGDKR--WSFPA-DYVTFLVHKTNLVTSDVASTLAARLNLRPSQVNYSGIKDKRAKTTQKFSVKRRTPESILVAARSQRNVNIGNFGFESNTLKLGDLQGNRFRIALRHIAKEK-------REEIERALQSLKERGFINYYGLQRFGNSASVPTYEVGVALLKNDYKLACELIL---
A2FUM2/11-39_107-268          ---------------GCTRFANE-SSGFDGIIKHKYSDFH-VHEIDAEKR----RPQFEITRFTLFKENVNQQEAMAKILARLNITQNQLGFAGNKDKRAATTQYVTVRDVPLQKVVKSLSNLDKVTCGEFCHVTSPLKLGDLSGNRFTIAIRGLKIGQ--------KELDEKIKSIQKSGFINYYGMQRFG-TGETATHKIGILIIQGKYDAAVDAIMNP-
A0A177WGD1/279-459            ------------------------QKLKRGINKKRPSKPV-SSKVDFNDL------GGNYCHFTLYKENIDTMQAIAKISKSIRVPSKQFTFSGTKDKRAITTQRISVLNVRPSVLLGVNKLLGTSRIGDLSYHNTRLMLGSLSGNHFSIVLRNVEAQS-------DQVIHQSMQSFKQNGFINYYGMQRFG-TRSVSTHSVGIALLAEKWEQAIDLIMC--
A0A177WE94/46-228             ----------------------EFQKLKRGINKKRPSKPV-SSKVDFNDL------GGNYCHFTLYKENIDTMQAIAKISKSIRVPSKQFTFSGTKDKRAITTQRISVLNVRPSVLLGVNKLLGTSRIGDLSYHNTRLMLGSLSGNHFSIVLRNVEAQS-------DQVIHQSMQSFKQNGFINYYGMQRFG-TRSVSTHSVGIALLAEKWEQAIDLIMC--
F4NZK4/239-419                ------------------------QKLKRGINKKRPSKPV-SSKVDFNDL------GGNYCHFTLYKENIDTMQAIAKISKSIRVPSKQFTFSGTKDKRAITTQRISVLNVRPSVLLGVNKLLGTSRIGDLSYHNTRLMLGSLSGNHFSIVLRNVEAQS-------DQVIHQSMQSFKQNGFINYYGMQRFG-TRSVSTHSVGIALLAEKWEQAIDLIMC--
F4NZU6/239-419                ------------------------QKLKRGINKKRPSKPV-SSKVDFNDL------GGNYCHFTLYKENIDTMQAIAKISKSIRVPSKQFTFSGTKDKRAITTQRISVLNVRPSVLLGVNKLLGTSRIGDLSYHNTRLMLGSLSGNHFSIVLRNVEAQS-------DQVIHQSMQSFKQNGFINYYGMQRFG-TRSVSTHSVGIALLAEKWEQAIDLIMC--
A0A177WF60/279-459            ------------------------QKLKRGINKKRPSKPV-SSKVDFNDL------GGNYCHFTLYKENIDTMQAIAKISKSIRVPSKQFTFSGTKDKRAITTQRISVLNVRPSVLLGVNKLLGTSRIGDLSYHNTRLMLGSLSGNHFSIVLRNVEAQS-------DQVIHQSMQSFKQNGFINYYGMQRFG-TRSVSTHSVGIALLAEKWEQAIDLIMC--
#=GC scorecons                000000000000000101110110333335447643434404434425450010124136448466967547455444644464444455456959979949893457444363365344533455459564533448499494996948689564434000000014374446565544998998969999154475963796567344653847694100
#=GC scorecons_70             ________________________________**_________________________*__*_*****__*______*___*__________*_*****_***___*____*_______________*________*_**_*_**_*_*_**_*______________*___*_*____*******_****____*_**_***_**___*__*_***____
#=GC scorecons_80             ______________________________________________________________*___*_*________________________*_*****_***________________________*________*_**_*_**_*_*_**________________*__________*******_****____*_*___*___*______*_*_*____
#=GC scorecons_90             __________________________________________________________________*__________________________*_**_**_***________________________*________*_**_*_**_*_*_**___________________________*******_****______*___*__________*___*____
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