# STOCKHOLM 1.0
#=GF ID 3.30.2350.20/FF/000010
#=GF DE Putative pseudouridine synthase YOR243C family
#=GF AC 3.30.2350.20/FF/000010
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 72.112
#=GS Q5XVC2/389-608_676-706              AC Q5XVC2
#=GS Q5XVC2/389-608_676-706              OS Arabidopsis thaliana
#=GS Q5XVC2/389-608_676-706              DE Pseudouridine synthase family protein
#=GS Q5XVC2/389-608_676-706              DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q5XVC2/389-608_676-706              DR GO; GO:0009982; 
#=GS A0A384KPV3/389-608_676-706          AC A0A384KPV3
#=GS A0A384KPV3/389-608_676-706          OS Arabidopsis thaliana
#=GS A0A384KPV3/389-608_676-706          DE Uncharacterized protein
#=GS A0A384KPV3/389-608_676-706          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F6HTS9/185-277_313-397_478-508      AC F6HTS9
#=GS F6HTS9/185-277_313-397_478-508      OS Vitis vinifera
#=GS F6HTS9/185-277_313-397_478-508      DE Uncharacterized protein
#=GS F6HTS9/185-277_313-397_478-508      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A0A1D6IKI7/393-594_662-692          AC A0A1D6IKI7
#=GS A0A1D6IKI7/393-594_662-692          OS Zea mays
#=GS A0A1D6IKI7/393-594_662-692          DE Pseudouridine synthase family protein
#=GS A0A1D6IKI7/393-594_662-692          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A0L9VD30/321-424_462-543_621-651  AC A0A0L9VD30
#=GS A0A0L9VD30/321-424_462-543_621-651  OS Vigna angularis
#=GS A0A0L9VD30/321-424_462-543_621-651  DE Uncharacterized protein
#=GS A0A0L9VD30/321-424_462-543_621-651  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; 
#=GS M4CA96/359-591_639-669              AC M4CA96
#=GS M4CA96/359-591_639-669              OS Brassica rapa subsp. pekinensis
#=GS M4CA96/359-591_639-669              DE Uncharacterized protein
#=GS M4CA96/359-591_639-669              DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS V7BMH7/356-455_492-573_651-681      AC V7BMH7
#=GS V7BMH7/356-455_492-573_651-681      OS Phaseolus vulgaris
#=GS V7BMH7/356-455_492-573_651-681      DE Uncharacterized protein
#=GS V7BMH7/356-455_492-573_651-681      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; 
#=GS A0A445FL47/356-457_488-569_647-677  AC A0A445FL47
#=GS A0A445FL47/356-457_488-569_647-677  OS Glycine soja
#=GS A0A445FL47/356-457_488-569_647-677  DE Multisubstrate pseudouridine synthase 7 isoform A
#=GS A0A445FL47/356-457_488-569_647-677  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GS A0A151TXM1/364-464_495-576_654-684  AC A0A151TXM1
#=GS A0A151TXM1/364-464_495-576_654-684  OS Cajanus cajan
#=GS A0A151TXM1/364-464_495-576_654-684  DE Putative pseudouridine synthase YOR243C family
#=GS A0A151TXM1/364-464_495-576_654-684  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; 
#=GS A0A0D3B9P7/386-610_657-687          AC A0A0D3B9P7
#=GS A0A0D3B9P7/386-610_657-687          OS Brassica oleracea var. oleracea
#=GS A0A0D3B9P7/386-610_657-687          DE Uncharacterized protein
#=GS A0A0D3B9P7/386-610_657-687          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS A0A1S3VES8/352-455_493-574_652-682  AC A0A1S3VES8
#=GS A0A1S3VES8/352-455_493-574_652-682  OS Vigna radiata var. radiata
#=GS A0A1S3VES8/352-455_493-574_652-682  DE multisubstrate pseudouridine synthase 7 isoform X1
#=GS A0A1S3VES8/352-455_493-574_652-682  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; 
#=GS I1NC79/356-457_488-569_647-677      AC I1NC79
#=GS I1NC79/356-457_488-569_647-677      OS Glycine max
#=GS I1NC79/356-457_488-569_647-677      DE Uncharacterized protein
#=GS I1NC79/356-457_488-569_647-677      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A1D6IKJ1/403-608_676-706          AC A0A1D6IKJ1
#=GS A0A1D6IKJ1/403-608_676-706          OS Zea mays
#=GS A0A1D6IKJ1/403-608_676-706          DE Pseudouridine synthase family protein
#=GS A0A1D6IKJ1/403-608_676-706          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6FSY0/369-577_635-665          AC A0A1D6FSY0
#=GS A0A1D6FSY0/369-577_635-665          OS Zea mays
#=GS A0A1D6FSY0/369-577_635-665          DE Pseudouridine synthase family protein
#=GS A0A1D6FSY0/369-577_635-665          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6FSX8/369-568_626-656          AC A0A1D6FSX8
#=GS A0A1D6FSX8/369-568_626-656          OS Zea mays
#=GS A0A1D6FSX8/369-568_626-656          DE Pseudouridine synthase family protein
#=GS A0A1D6FSX8/369-568_626-656          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6FSY5/196-407_465-495          AC A0A1D6FSY5
#=GS A0A1D6FSY5/196-407_465-495          OS Zea mays
#=GS A0A1D6FSY5/196-407_465-495          DE Pseudouridine synthase family protein
#=GS A0A1D6FSY5/196-407_465-495          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS B8A1N8/374-584_642-672              AC B8A1N8
#=GS B8A1N8/374-584_642-672              OS Zea mays
#=GS B8A1N8/374-584_642-672              DE Pseudouridine synthase family protein
#=GS B8A1N8/374-584_642-672              DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1JRL8/359-456_488-572_650-680      AC I1JRL8
#=GS I1JRL8/359-456_488-572_650-680      OS Glycine max
#=GS I1JRL8/359-456_488-572_650-680      DE Uncharacterized protein
#=GS I1JRL8/359-456_488-572_650-680      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0B2RGJ2/373-462_494-578_656-686  AC A0A0B2RGJ2
#=GS A0A0B2RGJ2/373-462_494-578_656-686  OS Glycine soja
#=GS A0A0B2RGJ2/373-462_494-578_656-686  DE Multisubstrate pseudouridine synthase 7
#=GS A0A0B2RGJ2/373-462_494-578_656-686  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GF SQ 19
Q5XVC2/389-608_676-706                      -------------VNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRM-MYVHSYQSYLWNNAASLRVKNYG----TSQVVLGDLVSTKVDAAKRMVDSLTSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYEQ----TQMALKMALTLPSSCYATMAIRELLKTST
A0A384KPV3/389-608_676-706                  -------------VNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRM-MYVHSYQSYLWNNAASLRVKNYG----TSQVVLGDLVSTKVDAAKRMVDSLTSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYEQ----TQMALKMALTLPSSCYATMAIRELLKTST
F6HTS9/185-277_313-397_478-508              ---------------------KESDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRM-MYVHSYQSYLWNHAASMRVQNYG----TKQVVLGDLVYCKGDNAEKVTRV----------------------------------KALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYPE----AQRALKLSFTLPASCYATMAIRELLKTST
A0A1D6IKI7/393-594_662-692                  ----------------------------AALRGMPRHLTVERAIVSFRDLFASMAHLGFSFHFKLGRFERYVHSYQSYLWNHAASMRVEKYG----ISQVVEGDLVYKTGSSLGEAITTDTFDDDDSHVNSPEMEMSCETL----TEEMIQSVKVVDSEDLLKAVYSFEDVVLPLPGSETLFPGNEVTMIYHEIAKKDGISLIESAHGIKDFSITSMKGGYRRVLQRPIDFEWDLMTYSP----EKLAVKLEFTLPASSYATMAIRELTKTST
A0A0L9VD30/321-424_462-543_621-651          ----------RIAIAKARKYYKESNDVVGTLKQLPRYLVAERAVLQSLKTSPGNYLQALKSIPRTLRM-LYIHSYQSYLWNHAASKRVQNYG----TEQVVLGDLVYCKGNSTAKVEE-------------------------------------FDAEDLNSGYYTIDDVILPMPGSRVKYPTNNIANVYEDLTKKDGISLTESVHKVEEFSITSITGCYRRVFQKPINFEWELLAYQH----SHIALKLSFTLPASCYATMAIRELLKTST
M4CA96/359-591_639-669                      FSLTLRFSPQRNVVNEAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGVPRTLRM-MYVHSYQSYLWNNATSLRVQKYG----TNQVVLGDLVSTKVDDAKRVVGSLNSEQKENSEEALDCDQLDDTAVVDLPGERSDLFKVVGKEDVEAGTYSTSDIVLPLPGSRVIYPSNDVAEIFHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYEQ----TQLALKMALTLPSSCYATMAIRELLKTST
V7BMH7/356-455_492-573_651-681              --------------AKARKYYKENNDVVGTLKQLPRYLVAERAVLQSLKTSPGNYLQALKSIPRTLRL-LYIHSYQSYLWNHAASKRVQKYG----TEQVVLGDLVNCKENSTAKITE-------------------------------------FDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEEFSITSITGCYRRVFQKPINFEWELLTYQD----SHTALKLSFTLPASCYATMAIRELLKTST
A0A445FL47/356-457_488-569_647-677          -----------------RKYYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRM-LYVHSYQSYLWNHAASKRVQKYG----TENVVLGDLVYCKENSTGKVTEFVG--------------------------------SEYDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVFQKPINFEWELLSYQD----SQIALKLSFTLPASCYATMAIRELLKTST
A0A151TXM1/364-464_495-576_654-684          -----------------RKYYKESNDVVGTLKQLPRYMVAERAVLQTLKMSPGNYLQALKSIPRTLRM-LYVHSYQSYLWNHAASKRVQKYG----TE-LVLGDLVYCKENSTGKVTELVG--------------------------------SEYDAEDLNSGSYTIDDVILPMPGSRVNYPTNHIASVYEDLAKKDGISLTESMHNVEEFSITSITGCYRRVFQKPINFEWELLTYQD----PHIALKLSFTLPASCYATMAIRELLKTST
A0A0D3B9P7/386-610_657-687                  --------SERNVVNEAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRM-MYVHSYQSYLWNNAASLRVQKYG----TSQVVLGDLVSTKVDDAKRIVSSLNSGQKENSEEALDCDQLDDTAVVDLPGERSDLVKVVGIEDIEAGTYSTSDIVLPLPGSRVIYPSNDIAEIFHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYEQ----TQRALKMALTLPSSCYATMAIRELLKTST
A0A1S3VES8/352-455_493-574_652-682          ----------RIAIAKARKYYKESNDVVGTLKQLPRYLVAERAVLQSLKTSPGNYLQALKSIPRTLRM-LYIHSYQSYLWNHAASKRVQNYG----TEQVVLGDLVYCKGNSTAKVTE-------------------------------------FDDEDLNSGCYTIDDVILPMPGSRVKYPTNNIANVYEDLTKKDGISLTESVHKVEEFSITSITGCYRRVFQKPINFEWELLEYQH----SHIALKLSFTLPASCYATMAIRELLKTST
I1NC79/356-457_488-569_647-677              -----------------RKYYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRM-LYVHSYQSYLWNHAASKRVQKYG----TENVVLGDLVYCKENSTGKVTEFVG--------------------------------SEYDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVFQKPINFEWELLSYQD----SQIALKLSFTLPASCYATMAIRELLKTST
A0A1D6IKJ1/403-608_676-706                  ----------------------------AALRGMPRHLTVERAIVSFRDLFASMAHLGFSFHFKLGRFERYVHSYQSYLWNHAASMRVEKYGKFICISQVVEGDLVYKTGSSLGEAITTDTFDDDDSHVNSPEMEMSCETL----TEEMIQSVKVVDSEDLLKAVYSFEDVVLPLPGSETLFPGNEVTMIYHEIAKKDGISLIESAHGIKDFSITSMKGGYRRVLQRPIDFEWDLMTYSP----EKLAVKLEFTLPASSYATMAIRELTKTST
A0A1D6FSY0/369-577_635-665                  ------------------------GDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRM-MYVHSYQSYLWNHAASMRVEKYG----ISQVVEGDLVYNKECPSEESTSVDILETDDDHTNSIEIDLCSEAQ----PEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGISLTENAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTRPKKLALKLAFTLPTSCYATMAIRELLKTST
A0A1D6FSX8/369-568_626-656                  ------------------------GDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRM-MYVHSYQSYLWNHAASMRVEKYG----ISQVVEGDLVYNKECPSEESTSVDILETDDDHTNSIEIDLCSEAQ----PEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGWKYL---------NFAFMTQDGISLTENAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTRPKKLALKLAFTLPTSCYATMAIRELLKTST
A0A1D6FSY5/196-407_465-495                  ---------------------KEHGDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRM-MYVHSYQSYLWNHAASMRVEKYG----ISQVVEGDLVYNKECPSEESTSVDILETDDDHTNSIEIDLCSEAQ----PEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGISLTENAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTRPKKLALKLAFTLPTSCYATMAIRELLKTST
B8A1N8/374-584_642-672                      ----------------------EHGDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRM-MYVHSYQSYLWNHAASMRVEKYG----ISQVVEGDLVYNKECPSEESTSVDILETDDDHTNSIEIDLCSEAQ----PEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGISLTENAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTRPKKLALKLAFTLPTSCYATMAIRELLKTST
I1JRL8/359-456_488-572_650-680              -----------------RKYYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRM-LYVHSYQSYLWNHAASKRVQKYG----TENVVLGDLVYCKENSTGKVTESV---------------------------------KVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVFQKPINFEWELLTYQD----SQIALKLSFTLPASCYATMAIRELLKTST
A0A0B2RGJ2/373-462_494-578_656-686          -------------------------DVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRM-LYVHSYQSYLWNHAASKRVQKYG----TENVVLGDLVYCKENSTGKVTESV---------------------------------KVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVFQKPINFEWELLTYQD----SQIALKLSFTLPASCYATMAIRELLKTST
#=GC scorecons                              000000000000000012122342365356975699787799977746745777577777467876970598999999999798949966990000656894999964744444545422212112111111212111221000021211111535647963473964697799699864467474663675667789899979759586799998659589997979959998967944000035497975799959799999999979999
#=GC scorecons_70                           _________________________*___***__************_**__***_*****_*******__***************_**_***____*_***_****__*_______________________________________________*_***__*_**__*********___**_*_**__*_*_***********_*_*********_*_*********_********_________****_****_****************
#=GC scorecons_80                           ______________________________**__**_*********__*__**____***___**_*___***********_***_**__**_______**_****__*__________________________________________________*___*_*___*****_***____*_*_____*___**********__*_*_******__*_*********_*****__*_________****_****_****************
#=GC scorecons_90                           ______________________________*___**_*__***_______________________*___*_*********_***_**__**_______**_****_____________________________________________________*_____*___*__**_**___________________******_*__*____*****__*_****_*_**_***_*__*_________*_*___***_*_*********_****
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