# STOCKHOLM 1.0
#=GF ID 3.20.190.20/FF/000003
#=GF DE Protease Do-like 2, chloroplastic
#=GF AC 3.20.190.20/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 10.737
#=GS 4flnC02/358-509     AC O82261
#=GS 4flnC02/358-509     OS Arabidopsis thaliana
#=GS 4flnC02/358-509     DE Protease Do-like 2, chloroplastic
#=GS 4flnC02/358-509     DR CATH; 4fln; C:426-577; 
#=GS 4flnC02/358-509     DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS 4flnC02/358-509     DR GO; GO:0004252; GO:0009507; GO:0009533; GO:0009535; GO:0009570; GO:0009658; GO:0009941; GO:0010206; GO:0030163; 
#=GS 4flnB02/358-509     AC O82261
#=GS 4flnB02/358-509     OS Arabidopsis thaliana
#=GS 4flnB02/358-509     DE Protease Do-like 2, chloroplastic
#=GS 4flnB02/358-509     DR CATH; 4fln; B:426-577; 
#=GS 4flnB02/358-509     DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS 4flnB02/358-509     DR GO; GO:0004252; GO:0009507; GO:0009533; GO:0009535; GO:0009570; GO:0009658; GO:0009941; GO:0010206; GO:0030163; 
#=GS 4flnA02/358-509     AC O82261
#=GS 4flnA02/358-509     OS Arabidopsis thaliana
#=GS 4flnA02/358-509     DE Protease Do-like 2, chloroplastic
#=GS 4flnA02/358-509     DR CATH; 4fln; A:426-577; 
#=GS 4flnA02/358-509     DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS 4flnA02/358-509     DR GO; GO:0004252; GO:0009507; GO:0009533; GO:0009535; GO:0009570; GO:0009658; GO:0009941; GO:0010206; GO:0030163; 
#=GS O82261/428-577      AC O82261
#=GS O82261/428-577      OS Arabidopsis thaliana
#=GS O82261/428-577      DE Protease Do-like 2, chloroplastic
#=GS O82261/428-577      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS O82261/428-577      DR GO; GO:0004252; GO:0009507; GO:0009533; GO:0009535; GO:0009570; GO:0009658; GO:0009941; GO:0010206; GO:0030163; 
#=GS A0A178VUR8/428-577  AC A0A178VUR8
#=GS A0A178VUR8/428-577  OS Arabidopsis thaliana
#=GS A0A178VUR8/428-577  DE EMB3117
#=GS A0A178VUR8/428-577  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS B3H581/427-576      AC B3H581
#=GS B3H581/427-576      OS Arabidopsis thaliana
#=GS B3H581/427-576      DE DEGP protease 2
#=GS B3H581/427-576      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS V4LAN4/433-582      AC V4LAN4
#=GS V4LAN4/433-582      OS Eutrema salsugineum
#=GS V4LAN4/433-582      DE Uncharacterized protein
#=GS V4LAN4/433-582      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A078GQJ6/405-559  AC A0A078GQJ6
#=GS A0A078GQJ6/405-559  OS Brassica napus
#=GS A0A078GQJ6/405-559  DE BnaC04g51050D protein
#=GS A0A078GQJ6/405-559  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS R0G0L9/425-574      AC R0G0L9
#=GS R0G0L9/425-574      OS Capsella rubella
#=GS R0G0L9/425-574      DE Uncharacterized protein
#=GS R0G0L9/425-574      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7MVW8/431-580      AC D7MVW8
#=GS D7MVW8/431-580      OS Arabidopsis lyrata subsp. lyrata
#=GS D7MVW8/431-580      DE Uncharacterized protein
#=GS D7MVW8/431-580      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A0D3C6S3/435-589  AC A0A0D3C6S3
#=GS A0A0D3C6S3/435-589  OS Brassica oleracea var. oleracea
#=GS A0A0D3C6S3/435-589  DE Uncharacterized protein
#=GS A0A0D3C6S3/435-589  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS M4DY54/421-575      AC M4DY54
#=GS M4DY54/421-575      OS Brassica rapa subsp. pekinensis
#=GS M4DY54/421-575      DE Uncharacterized protein
#=GS M4DY54/421-575      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS D7LHE0/434-583      AC D7LHE0
#=GS D7LHE0/434-583      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LHE0/434-583      DE Uncharacterized protein
#=GS D7LHE0/434-583      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A078IVJ3/415-569  AC A0A078IVJ3
#=GS A0A078IVJ3/415-569  OS Brassica napus
#=GS A0A078IVJ3/415-569  DE BnaA04g29470D protein
#=GS A0A078IVJ3/415-569  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GF SQ 14
4flnC02/358-509             VHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
4flnB02/358-509             VHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
4flnA02/358-509             VHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
O82261/428-577              --LVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
A0A178VUR8/428-577          --LVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
B3H581/427-576              --LVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
V4LAN4/433-582              --LVPFHIDGGQPSYIIIAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGTPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASDSASLCILKDYGIPSERSADLREPYID
A0A078GQJ6/405-559          --LVPYHIDGGQPSYIIIAGLVFTPLSEPLIEEECEDSIGLKLLTKARYSVARFRGEQIVILSQASHNDVLANEVNIGYEDMNNQQVLKFNGTHIRNIHHLAHLIDMCNDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLREPYVD
R0G0L9/425-574              --LVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
D7MVW8/431-580              --LVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
A0A0D3C6S3/435-589          --LVPYHIDGGQPSYIIIAGLVFTPLSEPLIEEECEDSIGLKLLTKARYSVARFRGEQIVILSQASHNDVLANEVNIGYEDMNNQQVLKFNGTHIRNIHHLAHLIDMCNDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLREPYVD
M4DY54/421-575              --LVPYHIDGGQPSYIIIAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQASHNDVLANEVNIGYEDMNNQQVLKFNGTHIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLREPYVD
D7LHE0/434-583              --LVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ-----VLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD
A0A078IVJ3/415-569          --LVPYHIDGGQPSYIIIAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQASHNDVLANEVNIGYEDMNNQQVLKFNGTHIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLREPYVD
#=GC scorecons              0099989999999999979999999999999999999699999999999999999999999999111119999999999999999999999965999999999999996999999999999999999999899999999999999999999499989
#=GC scorecons_70           __**************************************************************_____***********************__*********************************************************_*****
#=GC scorecons_80           __***************_*******************_**************************_____***********************__**************_******************************************_*****
#=GC scorecons_90           __***************_*******************_**************************_____***********************__**************_******************************************_*****
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