# STOCKHOLM 1.0
#=GF ID 3.10.290.10/FF/000026
#=GF DE 30S ribosomal protein S4
#=GF AC 3.10.290.10/FF/000026
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 74.184
#=GS Q8TRR1/110-203      AC Q8TRR1
#=GS Q8TRR1/110-203      OS Methanosarcina acetivorans C2A
#=GS Q8TRR1/110-203      DE 30S ribosomal protein S4
#=GS Q8TRR1/110-203      DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina acetivorans; 
#=GS P54020/104-182      AC P54020
#=GS P54020/104-182      OS Methanocaldococcus jannaschii DSM 2661
#=GS P54020/104-182      DE 30S ribosomal protein S4
#=GS P54020/104-182      DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus jannaschii; 
#=GS Q5JJF2/102-176      AC Q5JJF2
#=GS Q5JJF2/102-176      OS Thermococcus kodakarensis KOD1
#=GS Q5JJF2/102-176      DE 30S ribosomal protein S4
#=GS Q5JJF2/102-176      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis; 
#=GS P95987/103-172      AC P95987
#=GS P95987/103-172      OS Saccharolobus solfataricus P2
#=GS P95987/103-172      DE 30S ribosomal protein S4
#=GS P95987/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; 
#=GS B1L795/101-165      AC B1L795
#=GS B1L795/101-165      OS Candidatus Korarchaeum cryptofilum OPF8
#=GS B1L795/101-165      DE 30S ribosomal protein S4
#=GS B1L795/101-165      DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; 
#=GS M9U8I8/103-172      AC M9U8I8
#=GS M9U8I8/103-172      OS Sulfolobus islandicus LAL14/1
#=GS M9U8I8/103-172      DE 30S ribosomal protein S4
#=GS M9U8I8/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS A0A0E3RT69/111-204  AC A0A0E3RT69
#=GS A0A0E3RT69/111-204  OS Methanosarcina mazei LYC
#=GS A0A0E3RT69/111-204  DE 30S ribosomal protein S4
#=GS A0A0E3RT69/111-204  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; 
#=GS A0A0E3L280/110-203  AC A0A0E3L280
#=GS A0A0E3L280/110-203  OS Methanosarcina sp. WWM596
#=GS A0A0E3L280/110-203  DE 30S ribosomal protein S4
#=GS A0A0E3L280/110-203  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. WWM596; 
#=GS A0A0E3NS60/110-203  AC A0A0E3NS60
#=GS A0A0E3NS60/110-203  OS Methanosarcina sp. WH1
#=GS A0A0E3NS60/110-203  DE 30S ribosomal protein S4
#=GS A0A0E3NS60/110-203  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. WH1; 
#=GS A0A0E3SCI4/111-204  AC A0A0E3SCI4
#=GS A0A0E3SCI4/111-204  OS Methanosarcina horonobensis HB-1 = JCM 15518
#=GS A0A0E3SCI4/111-204  DE 30S ribosomal protein S4
#=GS A0A0E3SCI4/111-204  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina horonobensis; 
#=GS A0A0F8F713/111-204  AC A0A0F8F713
#=GS A0A0F8F713/111-204  OS Methanosarcina mazei
#=GS A0A0F8F713/111-204  DE 30S ribosomal protein S4
#=GS A0A0F8F713/111-204  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; 
#=GS Q8PV18/111-204      AC Q8PV18
#=GS Q8PV18/111-204      OS Methanosarcina mazei Go1
#=GS Q8PV18/111-204      DE 30S ribosomal protein S4
#=GS Q8PV18/111-204      DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; 
#=GS M1PYW6/111-204      AC M1PYW6
#=GS M1PYW6/111-204      OS Methanosarcina mazei Tuc01
#=GS M1PYW6/111-204      DE 30S ribosomal protein S4
#=GS M1PYW6/111-204      DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; 
#=GS A0A0E3RLE2/111-204  AC A0A0E3RLE2
#=GS A0A0E3RLE2/111-204  OS Methanosarcina mazei S-6
#=GS A0A0E3RLE2/111-204  DE 30S ribosomal protein S4
#=GS A0A0E3RLE2/111-204  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; 
#=GS C4KJ91/103-172      AC C4KJ91
#=GS C4KJ91/103-172      OS Sulfolobus islandicus M.16.4
#=GS C4KJ91/103-172      DE 30S ribosomal protein S4
#=GS C4KJ91/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS C3MJP5/103-172      AC C3MJP5
#=GS C3MJP5/103-172      OS Sulfolobus islandicus L.S.2.15
#=GS C3MJP5/103-172      DE 30S ribosomal protein S4
#=GS C3MJP5/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS C3MZ03/103-172      AC C3MZ03
#=GS C3MZ03/103-172      OS Sulfolobus islandicus M.14.25
#=GS C3MZ03/103-172      DE 30S ribosomal protein S4
#=GS C3MZ03/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS C3NMQ2/103-172      AC C3NMQ2
#=GS C3NMQ2/103-172      OS Sulfolobus islandicus Y.N.15.51
#=GS C3NMQ2/103-172      DE 30S ribosomal protein S4
#=GS C3NMQ2/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS C3N8R6/103-172      AC C3N8R6
#=GS C3N8R6/103-172      OS Sulfolobus islandicus Y.G.57.14
#=GS C3N8R6/103-172      DE 30S ribosomal protein S4
#=GS C3N8R6/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS C3N052/103-172      AC C3N052
#=GS C3N052/103-172      OS Sulfolobus islandicus M.16.27
#=GS C3N052/103-172      DE 30S ribosomal protein S4
#=GS C3N052/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS F0NIQ0/103-172      AC F0NIQ0
#=GS F0NIQ0/103-172      OS Sulfolobus islandicus REY15A
#=GS F0NIQ0/103-172      DE 30S ribosomal protein S4
#=GS F0NIQ0/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS A0A2T9XDF8/103-172  AC A0A2T9XDF8
#=GS A0A2T9XDF8/103-172  OS Sulfolobus islandicus
#=GS A0A2T9XDF8/103-172  DE 30S ribosomal protein S4
#=GS A0A2T9XDF8/103-172  DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS D2PEC4/103-172      AC D2PEC4
#=GS D2PEC4/103-172      OS Sulfolobus islandicus L.D.8.5
#=GS D2PEC4/103-172      DE 30S ribosomal protein S4
#=GS D2PEC4/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus; Sulfolobus islandicus; 
#=GS A0A0E3GUT3/103-172  AC A0A0E3GUT3
#=GS A0A0E3GUT3/103-172  OS Saccharolobus solfataricus
#=GS A0A0E3GUT3/103-172  DE 30S ribosomal protein S4
#=GS A0A0E3GUT3/103-172  DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; 
#=GS D0KRC8/103-172      AC D0KRC8
#=GS D0KRC8/103-172      OS Saccharolobus solfataricus 98/2
#=GS D0KRC8/103-172      DE 30S ribosomal protein S4
#=GS D0KRC8/103-172      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; 
#=GS A0A429G5P2/101-165  AC A0A429G5P2
#=GS A0A429G5P2/101-165  OS Candidatus Korarchaeum cryptofilum
#=GS A0A429G5P2/101-165  DE 30S ribosomal protein S4
#=GS A0A429G5P2/101-165  DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; 
#=GF SQ 26
Q8TRR1/110-203              ERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGNSPLKNESHPERPVQVASFLADSGTTLKAAAEAKQAREK
P54020/104-182              ERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVTAPSYMVTVEEEDKISYAKNSPFNDDNHPERAKI-VGLV----------AEETQ----
Q5JJF2/102-176              ERRLQTIVYRKGLARTMKQARQLIVHGHIEVNGQVIRSPGYLVLREEEDTITYAKGSPFAKEGHPERMVI---------------EQAKQ----
P95987/103-172              ERRLQTIVYKKGLSNTIYQARQLITHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMSQ---------------QE-------
B1L795/101-165              ERRLQTIVWRKGFAKSPYMARQLITHGHIRVNGRRIRQPSYLVKIEEEDKIECLHPSCLEV--EKEV---------------------------
M9U8I8/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
A0A0E3RT69/111-204          ERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGSSPLMSESHSERPVQVASFLADSATTLKAAAEAKQARER
A0A0E3L280/110-203          ERRLQTQVLRLGLARTVVQARQFITHGHIAINGRKATIPGMLVSKDDEMHIGYYGNSPLMSEDHPERPVQVASFLADSATTLKAAAEAKQAREK
A0A0E3NS60/110-203          ERRLQTQVLRLGLARTVVQARQFITHGHIAINGRKATIPGMLVSKDDEMHIGYYGNSPLMSEDHPERPVQVASFLADSATTLKAAAEAKQAREK
A0A0E3SCI4/111-204          ERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATIPGMLVSKDDEMHIGYYGTSPLVSESHPERPVQVASFLADSATTLKAAAEAKQSRER
A0A0F8F713/111-204          ERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGSSPLMSESHSERPVQVASFLADSATTLKAAAEAKQARER
Q8PV18/111-204              ERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGSSPLMSESHSERPVQVASFLADSATTLKAAAEAKQARER
M1PYW6/111-204              ERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGSSPLMSESHSERPVQVASFLADSATTLKAAAEAKQARER
A0A0E3RLE2/111-204          ERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGSSPLMSESHSERPVQVASFLADSATTLKAAAEAKQARER
C4KJ91/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
C3MJP5/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
C3MZ03/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
C3NMQ2/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
C3N8R6/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
C3N052/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
F0NIQ0/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
A0A2T9XDF8/103-172          ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
D2PEC4/103-172              ERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMAQ---------------QE-------
A0A0E3GUT3/103-172          ERRLQTIVYKKGLSNTIYQARQLITHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMSQ---------------QE-------
D0KRC8/103-172              ERRLQTIVYKKGLSNTIYQARQLITHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKS--RPPVMSQ---------------QE-------
A0A429G5P2/101-165          ERRLQTIVWRKGFAKSPYMARQLITHGHIRVNGRRIRQPSYLVKIEEEDKIECLHPSCLEV--EKEV---------------------------
#=GC scorecons              9999994947598857447999696999977996657497569447794495864495646115554345111111111111111461121111
#=GC scorecons_70           ******_*_*_***_*__******_*********__*_**_**__***__*_**__*_*___________________________*_______
#=GC scorecons_80           ******_*_*_***_*__****_*_****_***_____**__*___**__*_*___*_____________________________________
#=GC scorecons_90           ******_*___*_______***_*_****__**_____*___*____*__*_____*_____________________________________
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