# STOCKHOLM 1.0 #=GF ID 3.10.290.10/FF/000025 #=GF DE 30S ribosomal subunit S4 #=GF AC 3.10.290.10/FF/000025 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 86.426 #=GS P27929/102-235 AC P27929 #=GS P27929/102-235 OS Saccharomyces cerevisiae S288C #=GS P27929/102-235 DE 37S ribosomal protein NAM9, mitochondrial #=GS P27929/102-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS P27929/102-235 DR GO; GO:0003735; GO:0005739; GO:0005763; GO:0032543; #=GS Q7SA90/141-240 AC Q7SA90 #=GS Q7SA90/141-240 OS Neurospora crassa OR74A #=GS Q7SA90/141-240 DE Mito ribosomal protein S4 #=GS Q7SA90/141-240 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; #=GS Q5B2R6/124-247 AC Q5B2R6 #=GS Q5B2R6/124-247 OS Aspergillus nidulans FGSC A4 #=GS Q5B2R6/124-247 DE 30S ribosomal subunit S4, putative (AFU_orthologue AFUA_1G06980) #=GS Q5B2R6/124-247 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; #=GS A0A1U8QTZ4/124-247 AC A0A1U8QTZ4 #=GS A0A1U8QTZ4/124-247 OS Aspergillus nidulans FGSC A4 #=GS A0A1U8QTZ4/124-247 DE Uncharacterized protein #=GS A0A1U8QTZ4/124-247 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; #=GS A0A1D8N7C4/122-228 AC A0A1D8N7C4 #=GS A0A1D8N7C4/122-228 OS Yarrowia lipolytica #=GS A0A1D8N7C4/122-228 DE Uncharacterized protein #=GS A0A1D8N7C4/122-228 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS Q5A6Q6/103-204 AC Q5A6Q6 #=GS Q5A6Q6/103-204 OS Candida albicans SC5314 #=GS Q5A6Q6/103-204 DE Mitochondrial 37S ribosomal protein NAM9 #=GS Q5A6Q6/103-204 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS Q754L0/102-204 AC Q754L0 #=GS Q754L0/102-204 OS Eremothecium gossypii ATCC 10895 #=GS Q754L0/102-204 DE AFR062Cp #=GS Q754L0/102-204 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS B9WLL6/103-204 AC B9WLL6 #=GS B9WLL6/103-204 OS Candida dubliniensis CD36 #=GS B9WLL6/103-204 DE Mitochondrial ribosome protein, small subunit #=GS B9WLL6/103-204 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; #=GS A0A0L8VIH5/102-235 AC A0A0L8VIH5 #=GS A0A0L8VIH5/102-235 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VIH5/102-235 DE NAM9p Mitochondrial ribosomal component of the small subunit #=GS A0A0L8VIH5/102-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS H0GMI0/102-235 AC H0GMI0 #=GS H0GMI0/102-235 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GMI0/102-235 DE Nam9p #=GS H0GMI0/102-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS G4UJ09/141-235 AC G4UJ09 #=GS G4UJ09/141-235 OS Neurospora tetrasperma FGSC 2509 #=GS G4UJ09/141-235 DE Alpha-L RNA-binding motif protein #=GS G4UJ09/141-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; #=GS A1D3S7/128-254 AC A1D3S7 #=GS A1D3S7/128-254 OS Aspergillus fischeri NRRL 181 #=GS A1D3S7/128-254 DE 30S ribosomal subunit S4, putative #=GS A1D3S7/128-254 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fischeri; #=GS A0A0J5SIU9/128-257 AC A0A0J5SIU9 #=GS A0A0J5SIU9/128-257 OS Aspergillus fumigatus Z5 #=GS A0A0J5SIU9/128-257 DE 30S ribosomal subunit S4 #=GS A0A0J5SIU9/128-257 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; #=GS A0A0S7E1M3/128-259 AC A0A0S7E1M3 #=GS A0A0S7E1M3/128-259 OS Aspergillus lentulus #=GS A0A0S7E1M3/128-259 DE 37S ribosomal protein NAM9, mitochondrial #=GS A0A0S7E1M3/128-259 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus lentulus; #=GS Q6CF39/122-228 AC Q6CF39 #=GS Q6CF39/122-228 OS Yarrowia lipolytica CLIB122 #=GS Q6CF39/122-228 DE YALI0B10494p #=GS Q6CF39/122-228 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS N1P4A7/102-235 AC N1P4A7 #=GS N1P4A7/102-235 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P4A7/102-235 DE Nam9p #=GS N1P4A7/102-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS G2WLW9/102-242 AC G2WLW9 #=GS G2WLW9/102-242 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WLW9/102-242 DE K7_Nam9p #=GS G2WLW9/102-242 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LNZ4/102-235 AC B3LNZ4 #=GS B3LNZ4/102-235 OS Saccharomyces cerevisiae RM11-1a #=GS B3LNZ4/102-235 DE Mitochondrial S4 ribosomal protein #=GS B3LNZ4/102-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B5VQR2/102-235 AC B5VQR2 #=GS B5VQR2/102-235 OS Saccharomyces cerevisiae AWRI1631 #=GS B5VQR2/102-235 DE YNL137Cp-like protein #=GS B5VQR2/102-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8ZG93/102-235 AC C8ZG93 #=GS C8ZG93/102-235 OS Saccharomyces cerevisiae EC1118 #=GS C8ZG93/102-235 DE Nam9p #=GS C8ZG93/102-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZRU6/102-236 AC A6ZRU6 #=GS A6ZRU6/102-236 OS Saccharomyces cerevisiae YJM789 #=GS A6ZRU6/102-236 DE Nuclear accommodation of mitochondria #=GS A6ZRU6/102-236 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS H0H062/102-240 AC H0H062 #=GS H0H062/102-240 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0H062/102-240 DE Nam9p #=GS H0H062/102-240 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A0A0B0DXP8/141-240 AC A0A0B0DXP8 #=GS A0A0B0DXP8/141-240 OS Neurospora crassa #=GS A0A0B0DXP8/141-240 DE Uncharacterized protein #=GS A0A0B0DXP8/141-240 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; #=GS F8MJC6/141-235 AC F8MJC6 #=GS F8MJC6/141-235 OS Neurospora tetrasperma FGSC 2508 #=GS F8MJC6/141-235 DE Uncharacterized protein #=GS F8MJC6/141-235 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; #=GS Q4WJ73/128-257 AC Q4WJ73 #=GS Q4WJ73/128-257 OS Aspergillus fumigatus Af293 #=GS Q4WJ73/128-257 DE 30S ribosomal subunit S4, putative #=GS Q4WJ73/128-257 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; #=GS A0A229XUL5/128-257 AC A0A229XUL5 #=GS A0A229XUL5/128-257 OS Aspergillus fumigatus #=GS A0A229XUL5/128-257 DE Uncharacterized protein #=GS A0A229XUL5/128-257 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; #=GS B0XPS0/128-257 AC B0XPS0 #=GS B0XPS0/128-257 OS Aspergillus fumigatus A1163 #=GS B0XPS0/128-257 DE 30S ribosomal subunit S4, putative #=GS B0XPS0/128-257 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; #=GF SQ 27 P27929/102-235 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPSFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLENFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNA------- Q7SA90/141-240 ERRLDIAIFRALFASSARQARQMVVHGAVTVNGKKMKHPGYLLNPGDLFQVDVERVLYATGAPKDKKLLAAAMKAAKKELAE---------EAQEAAEEKDAEAEEAEE--------------------------------- Q5B2R6/124-247 ERRLDVAIFRALFASSARQARQFVLHGAVTVNGKKMRYPGYLLNPGDMFQVDPERVMYATGAPKDKFERREARVERKKAVETEK---KEEGEGEEAKEGEEAEAKETEE-------EKLDTRETLKRLLSQAKN-------- A0A1U8QTZ4/124-247 ERRLDVAIFRALFASSARQARQFVLHGAVTVNGKKMRYPGYLLNPGDMFQVDPERVMYATGAPKDKFERREARVERKKAVETEK---KEEGEGEEAKEGEEAEAKETEE-------EKLDTRETLKRLLSQAKN-------- A0A1D8N7C4/122-228 EKRLDFAVFRSMFAASIRQAGQFIRQGNVTVNGVKIKHASYTLKPGDLISVKPEKVLFAAGKAKPSVEEAVK-IDNRQIKKYNQYIKKCNDDPEKMWNVRLDKIKKRE---------------------------------- Q5A6Q6/103-204 EKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGDVFSVDPEKVLFALGKTKPSLEKALS-VDKKQIKKWNNYVFEAKKNPEKIWDLKQNK--------------------------------------- Q754L0/102-204 EKRLEFALFRAMFASSVRQARQFILHGNVYVNGVTMKHPGYPLKAGDMFSVRPDKVLEALGARKPSLEQALA-IDKQQIRMWNKYVTEARNNPREAWQGKIKQL-------------------------------------- B9WLL6/103-204 EKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGDVFSVDPEKVLFALGKTKPSLEKALS-VDKKQIKKWNNYVFEAKQNPEKIWDLKQNK--------------------------------------- A0A0L8VIH5/102-235 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPSFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLENFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNA------- H0GMI0/102-235 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPSFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLENFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNA------- G4UJ09/141-235 ERRLDIAIFRALFASSARQARQMVVHGAVT-----MKHPGYLLNPGDLFQVDVERVLYATGAPKDKKLLAAAMKAAKKELAE---------EAQEAAEENDAEAEEAEE--------------------------------- A1D3S7/128-254 ERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPERVMYATGAPKDKFERRESRVARRKAAESNE----GETE-EAAAAETENKEDESET-TEAQDQQKDDPKETLKKLLTQAK--------- A0A0J5SIU9/128-257 ERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPERVMYATGAPKDKFERRESRVARRKAAESNE----GQTE-EGMAAETENKKDESET-TEAQDQQKDDPKETLKKLLTQAKTIM------ A0A0S7E1M3/128-259 ERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPERVMYATGAPKDKFERRESRVARRKAAESNE----GEKEAEGAAAETENKKDESET-TEAQDQQKDDPKETLKTLLTQAKTIMS----- Q6CF39/122-228 EKRLDFAVFRSMFAASIRQAGQFIRQGNVTVNGVKIKHASYTLKPGDLISVKPEKVLFAAGKAKPSVEEAVK-IDNRQIKKYNQYIKKCNDDPEKMWNVRLDKIKKRE---------------------------------- N1P4A7/102-235 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPSFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLENFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNA------- G2WLW9/102-242 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPSFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLEKFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNALKECTQE B3LNZ4/102-235 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPSFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLENFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNA------- B5VQR2/102-235 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPSFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLENFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNA------- C8ZG93/102-235 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPSFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLENFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNA------- A6ZRU6/102-236 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPDKVLEALGAKKPNFQEALK-IDKTQIVLWNKYVKEAKTEPKEVWEKKLENFEKMSDSNPKKLQFQEFLRQYNKNLESQQYNAL------ H0H062/102-240 EKRLDFALFRAMFASSVRQARQFILHGNVRVNGIKIKHPSYTLKPGDIFSVKPDKVLEALGAKKPSFEEALK-IDNTQIILWNKYVKEAKTDSKEVWGKKLEKFKNMSDSNPKKLQFQEFLKQYNKNLESQQYDALKECT-- A0A0B0DXP8/141-240 ERRLDIAIFRALFASSARQARQMVVHGAVTVNGKKMKHPGYLLNPGDLFQVDVERVLYATGAPKDKKLLAAAMKAAKKELAE---------EAQEAAEEKDAEAEEAEE--------------------------------- F8MJC6/141-235 ERRLDIAIFRALFASSARQARQMVVHGAVT-----MKHPGYLLNPGDLFQVDVERVLYATGAPKDKKLLAAAMKAAKKELAE---------EAQEAAEENDAEAEEAEE--------------------------------- Q4WJ73/128-257 ERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPERVMYATGAPKDKFERRESRVARRKAAESNE----GQTE-EGMAAETENKKDESET-TEAQDQQKDDPKETLKKLLTQAKTIM------ A0A229XUL5/128-257 ERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPERVMYATGAPKDKFERRESRVARRKAAESNE----GQTE-EGMAAETENKKDESET-TEAQDQQKDDPKETLKKLLTQAKTIM------ B0XPS0/128-257 ERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPERVMYATGAPKDKFERRESRVARRKAAESNE----GQTE-EGMAAETENKKDESET-TEAQDQQKDDPKETLKKLLTQAKTIM------ #=GC scorecons 9799859699779989599989775795957774567786859579968595777974959749554546441555564433532212333735554545345244343011111212211221131312321110000000 #=GC scorecons_70 *****_*_********_*******_**_*_***__****_*_*_***_*_*_*****_*_**_*_____________*_____________*__________________________________________________ #=GC scorecons_80 *_***_*_********_*****___**_*_***___***_*_*_***_*_*__*_*__*_*__*______________________________________________________________________________ #=GC scorecons_90 *_***_*_**__****_***_*____*_*_________*_*_*__**___*____*__*_*__*______________________________________________________________________________ //