# STOCKHOLM 1.0 #=GF ID 3.10.290.10/FF/000024 #=GF DE RNA pseudouridine synthase 2 chloroplastic #=GF AC 3.10.290.10/FF/000024 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 64.753 #=GS Q3ECD0/68-136 AC Q3ECD0 #=GS Q3ECD0/68-136 OS Arabidopsis thaliana #=GS Q3ECD0/68-136 DE RNA pseudouridine synthase 2, chloroplastic #=GS Q3ECD0/68-136 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q3ECD0/68-136 DR GO; GO:0009982; #=GS A0A1D6LMW5/57-127 AC A0A1D6LMW5 #=GS A0A1D6LMW5/57-127 OS Zea mays #=GS A0A1D6LMW5/57-127 DE RNA pseudouridine synthase 2 chloroplastic #=GS A0A1D6LMW5/57-127 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A3N7EGD4/50-119 AC A0A3N7EGD4 #=GS A0A3N7EGD4/50-119 OS Populus trichocarpa #=GS A0A3N7EGD4/50-119 DE Pseudouridine synthase #=GS A0A3N7EGD4/50-119 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A445KUR5/76-138 AC A0A445KUR5 #=GS A0A445KUR5/76-138 OS Glycine soja #=GS A0A445KUR5/76-138 DE RNA pseudouridine synthase 2, chloroplastic isoform A #=GS A0A445KUR5/76-138 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS R0IAL9/68-136 AC R0IAL9 #=GS R0IAL9/68-136 OS Capsella rubella #=GS R0IAL9/68-136 DE Pseudouridine synthase #=GS R0IAL9/68-136 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS G7J5V2/81-142 AC G7J5V2 #=GS G7J5V2/81-142 OS Medicago truncatula #=GS G7J5V2/81-142 DE Putative 23S rRNA pseudouridine(1911/1915/1917) synthase #=GS G7J5V2/81-142 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago; Medicago truncatula; #=GS A0A0D9WU72/60-129 AC A0A0D9WU72 #=GS A0A0D9WU72/60-129 OS Leersia perrieri #=GS A0A0D9WU72/60-129 DE Uncharacterized protein #=GS A0A0D9WU72/60-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A287XYA8/54-124 AC A0A287XYA8 #=GS A0A287XYA8/54-124 OS Hordeum vulgare subsp. vulgare #=GS A0A287XYA8/54-124 DE Uncharacterized protein #=GS A0A287XYA8/54-124 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A2T7DU20/59-129 AC A0A2T7DU20 #=GS A0A2T7DU20/59-129 OS Panicum hallii var. hallii #=GS A0A2T7DU20/59-129 DE Uncharacterized protein #=GS A0A2T7DU20/59-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; Panicum hallii var. hallii; #=GS A0A0Q3RUQ1/55-125 AC A0A0Q3RUQ1 #=GS A0A0Q3RUQ1/55-125 OS Brachypodium distachyon #=GS A0A0Q3RUQ1/55-125 DE Uncharacterized protein #=GS A0A0Q3RUQ1/55-125 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A368QZ55/55-125 AC A0A368QZ55 #=GS A0A368QZ55/55-125 OS Setaria italica #=GS A0A368QZ55/55-125 DE Uncharacterized protein #=GS A0A368QZ55/55-125 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Cenchrinae; Setaria; Setaria italica; #=GS A0A194YLS6/60-130 AC A0A194YLS6 #=GS A0A194YLS6/60-130 OS Sorghum bicolor #=GS A0A194YLS6/60-130 DE Uncharacterized protein #=GS A0A194YLS6/60-130 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A453T8X5/33-103 AC A0A453T8X5 #=GS A0A453T8X5/33-103 OS Aegilops tauschii subsp. strangulata #=GS A0A453T8X5/33-103 DE Uncharacterized protein #=GS A0A453T8X5/33-103 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GS I1JSZ4/76-138 AC I1JSZ4 #=GS I1JSZ4/76-138 OS Glycine max #=GS I1JSZ4/76-138 DE Uncharacterized protein #=GS I1JSZ4/76-138 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A0E0AEE8/59-129 AC A0A0E0AEE8 #=GS A0A0E0AEE8/59-129 OS Oryza glumipatula #=GS A0A0E0AEE8/59-129 DE Pseudouridine synthase #=GS A0A0E0AEE8/59-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A3L6S2F5/59-129 AC A0A3L6S2F5 #=GS A0A3L6S2F5/59-129 OS Panicum miliaceum #=GS A0A3L6S2F5/59-129 DE RNA pseudouridine synthase 2, chloroplastic #=GS A0A3L6S2F5/59-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS A0A2S3HG92/59-129 AC A0A2S3HG92 #=GS A0A2S3HG92/59-129 OS Panicum hallii #=GS A0A2S3HG92/59-129 DE Uncharacterized protein #=GS A0A2S3HG92/59-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; #=GS A0A1D6LMW4/57-127 AC A0A1D6LMW4 #=GS A0A1D6LMW4/57-127 OS Zea mays #=GS A0A1D6LMW4/57-127 DE RNA pseudouridine synthase 2 chloroplastic #=GS A0A1D6LMW4/57-127 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0E0AEE7/59-129 AC A0A0E0AEE7 #=GS A0A0E0AEE7/59-129 OS Oryza glumipatula #=GS A0A0E0AEE7/59-129 DE Uncharacterized protein #=GS A0A0E0AEE7/59-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A2T7DU12/59-129 AC A0A2T7DU12 #=GS A0A2T7DU12/59-129 OS Panicum hallii var. hallii #=GS A0A2T7DU12/59-129 DE Uncharacterized protein #=GS A0A2T7DU12/59-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; Panicum hallii var. hallii; #=GS I1GVB4/55-125 AC I1GVB4 #=GS I1GVB4/55-125 OS Brachypodium distachyon #=GS I1GVB4/55-125 DE Uncharacterized protein #=GS I1GVB4/55-125 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A287XXZ3/54-124 AC A0A287XXZ3 #=GS A0A287XXZ3/54-124 OS Hordeum vulgare subsp. vulgare #=GS A0A287XXZ3/54-124 DE Uncharacterized protein #=GS A0A287XXZ3/54-124 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A2T7DU14/59-129 AC A0A2T7DU14 #=GS A0A2T7DU14/59-129 OS Panicum hallii var. hallii #=GS A0A2T7DU14/59-129 DE Uncharacterized protein #=GS A0A2T7DU14/59-129 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; Panicum hallii var. hallii; #=GS A0A1D6LMW6/57-127 AC A0A1D6LMW6 #=GS A0A1D6LMW6/57-127 OS Zea mays #=GS A0A1D6LMW6/57-127 DE RNA pseudouridine synthase 2 chloroplastic #=GS A0A1D6LMW6/57-127 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1W0VV01/60-130 AC A0A1W0VV01 #=GS A0A1W0VV01/60-130 OS Sorghum bicolor #=GS A0A1W0VV01/60-130 DE Uncharacterized protein #=GS A0A1W0VV01/60-130 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A453T909/34-104 AC A0A453T909 #=GS A0A453T909/34-104 OS Aegilops tauschii subsp. strangulata #=GS A0A453T909/34-104 DE Uncharacterized protein #=GS A0A453T909/34-104 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GS A0A453T8Y7/33-103 AC A0A453T8Y7 #=GS A0A453T8Y7/33-103 OS Aegilops tauschii subsp. strangulata #=GS A0A453T8Y7/33-103 DE Uncharacterized protein #=GS A0A453T8Y7/33-103 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GS A0A453T8Y0/34-104 AC A0A453T8Y0 #=GS A0A453T8Y0/34-104 OS Aegilops tauschii subsp. strangulata #=GS A0A453T8Y0/34-104 DE Uncharacterized protein #=GS A0A453T8Y0/34-104 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GS B4FNR9/57-127 AC B4FNR9 #=GS B4FNR9/57-127 OS Zea mays #=GS B4FNR9/57-127 DE Uncharacterized protein #=GS B4FNR9/57-127 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS B9GQ77/50-119 AC B9GQ77 #=GS B9GQ77/50-119 OS Populus trichocarpa #=GS B9GQ77/50-119 DE Pseudouridine synthase #=GS B9GQ77/50-119 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GF SQ 30 Q3ECD0/68-136 -GLRIEEIVDAAKGKIRLDSWISSRI--NGVSRARVQSSIRLGLVTVNGRVVDKVSHNVKSGDEVNCTISEL-- A0A1D6LMW5/57-127 --TRLEEAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVSCTVSELQ- A0A3N7EGD4/50-119 SGVKLEESVDSKSGKSRLDSWISSRI--SGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKVNCVISEL-- A0A445KUR5/76-138 ---------RIGSGKLRLDNWISSRI--NGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQN R0IAL9/68-136 -GLRIEETVDDLKGKIRLDSWISSRI--NGVSRARVQSSIRLGLVTVNGRVVDKVSHNVKAGDEVNCTISEL-- G7J5V2/81-142 ----------IKSGKLRLDSWISSRI--NGISRARVQSSIKAGLVHVNGRVVDKVSFNVRAGDEIKCTIAELQQ A0A0D9WU72/60-129 --TRLEEAVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAGLVAVNGRPVSKVSHMVKGGDMVSCMVSEL-- A0A287XYA8/54-124 --TRLEEAVPAAEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSQTVKGGDKVSCTVSELQ- A0A2T7DU20/59-129 --TRLEEAVPAGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHMVKGGDLVSCTVSELQ- A0A0Q3RUQ1/55-125 --TRLEEAVPAGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSQTVKGGDTVSCTVSELQ- A0A368QZ55/55-125 --TRLEEAVPAGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHMVKGGDLVSCTVSELQ- A0A194YLS6/60-130 --MRLEEAVPVGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVSCTVSELQ- A0A453T8X5/33-103 --TRLEEAVPAAEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDKVSCTVSELQ- I1JSZ4/76-138 ---------RIGSGKLRLDNWISSRI--NGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQN A0A0E0AEE8/59-129 --TRLEEAVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVSHMVKGGDIVSCTVSELQ- A0A3L6S2F5/59-129 --TRLEEAVPAGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHMVKGGDLVSCTVSELQ- A0A2S3HG92/59-129 --TRLEEAVPAGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHMVKGGDLVSCTVSELQ- A0A1D6LMW4/57-127 --TRLEEAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVSCTVSELQ- A0A0E0AEE7/59-129 --TRLEEAVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVSHMVKGGDIVSCTVSELQ- A0A2T7DU12/59-129 --TRLEEAVPAGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHMVKGGDLVSCTVSELQ- I1GVB4/55-125 --TRLEEAVPAGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSQTVKGGDTVSCTVSELQ- A0A287XXZ3/54-124 --TRLEEAVPAAEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSQTVKGGDKVSCTVSELQ- A0A2T7DU14/59-129 --TRLEEAVPAGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHMVKGGDLVSCTVSELQ- A0A1D6LMW6/57-127 --TRLEEAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVSCTVSELQ- A0A1W0VV01/60-130 --MRLEEAVPVGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVSCTVSELQ- A0A453T909/34-104 --TRLEEAVPAAEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDKVSCTVSELQ- A0A453T8Y7/33-103 --TRLEEAVPAAEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDKVSCTVSELQ- A0A453T8Y0/34-104 --TRLEEAVPAAEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDKVSCTVSELQ- B4FNR9/57-127 --TRLEEAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVSCTVSELQ- B9GQ77/50-119 SGVKLEESVDSKSGKSRLDSWISSRI--SGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKVNCVISEL-- #=GC scorecons 00344553544459759595999696225979999896997599949998585999649859937597779940 #=GC scorecons_70 _____________**_*_*_***_**___********_***_***_****_*_***__**_**_*_******__ #=GC scorecons_80 _____________*__*_*_***_*____********_***_***_****_*_***__**_**_*_**__**__ #=GC scorecons_90 _____________*__*_*_***_*____*_******_**__***_****_*_***__**_**___*___**__ //