# STOCKHOLM 1.0
#=GF ID 3.10.20.90/FF/000428
#=GF DE Polyubiquitin-C
#=GF AC 3.10.20.90/FF/000428
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 48.996
#=GS 2gbnA00/1-84        AC P0CG48
#=GS 2gbnA00/1-84        OS Homo sapiens
#=GS 2gbnA00/1-84        DE Polyubiquitin-C
#=GS 2gbnA00/1-84        DR CATH; 2gbn; A:1-81; 
#=GS 2gbnA00/1-84        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 2gbmD00/1-84        AC P0CG48
#=GS 2gbmD00/1-84        OS Homo sapiens
#=GS 2gbmD00/1-84        DE Polyubiquitin-C
#=GS 2gbmD00/1-84        DR CATH; 2gbm; D:1-80; 
#=GS 2gbmD00/1-84        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 2gbmC00/1-84        AC P0CG48
#=GS 2gbmC00/1-84        OS Homo sapiens
#=GS 2gbmC00/1-84        DE Polyubiquitin-C
#=GS 2gbmC00/1-84        DR CATH; 2gbm; C:1-80; 
#=GS 2gbmC00/1-84        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 2gbmB00/1-84        AC P0CG48
#=GS 2gbmB00/1-84        OS Homo sapiens
#=GS 2gbmB00/1-84        DE Polyubiquitin-C
#=GS 2gbmB00/1-84        DR CATH; 2gbm; B:1-80; 
#=GS 2gbmB00/1-84        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 2gbmA00/1-84        AC P0CG48
#=GS 2gbmA00/1-84        OS Homo sapiens
#=GS 2gbmA00/1-84        DE Polyubiquitin-C
#=GS 2gbmA00/1-84        DR CATH; 2gbm; A:1-81; 
#=GS 2gbmA00/1-84        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1zw7A00/1-82        AC P0CG63
#=GS 1zw7A00/1-82        OS Saccharomyces cerevisiae S288C
#=GS 1zw7A00/1-82        DE Polyubiquitin
#=GS 1zw7A00/1-82        DR CATH; 1zw7; A:1-82; 
#=GS 1zw7A00/1-82        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS W1PSS1/20-61        AC W1PSS1
#=GS W1PSS1/20-61        OS Amborella trichopoda
#=GS W1PSS1/20-61        DE Uncharacterized protein
#=GS W1PSS1/20-61        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Amborellales; Amborellaceae; Amborella; Amborella trichopoda; 
#=GS A7T469/1-42         AC A7T469
#=GS A7T469/1-42         OS Nematostella vectensis
#=GS A7T469/1-42         DE Predicted protein
#=GS A7T469/1-42         DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS A2G7Q5/2-51         AC A2G7Q5
#=GS A2G7Q5/2-51         OS Trichomonas vaginalis
#=GS A2G7Q5/2-51         DE Ubiquitin-carboxy extension protein fusion, putative
#=GS A2G7Q5/2-51         DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A0A238FFX6/253-289  AC A0A238FFX6
#=GS A0A238FFX6/253-289  OS Microbotryum intermedium
#=GS A0A238FFX6/253-289  DE BQ2448_3675 protein
#=GS A0A238FFX6/253-289  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Microbotryales; Microbotryaceae; Microbotryum; Microbotryum intermedium; 
#=GS F6VJQ1/1-42         AC F6VJQ1
#=GS F6VJQ1/1-42         OS Ciona intestinalis
#=GS F6VJQ1/1-42         DE Uncharacterized protein
#=GS F6VJQ1/1-42         DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A151SSM7/710-746  AC A0A151SSM7
#=GS A0A151SSM7/710-746  OS Cajanus cajan
#=GS A0A151SSM7/710-746  DE Ubiquitin
#=GS A0A151SSM7/710-746  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; 
#=GS F9FEG0/70-105       AC F9FEG0
#=GS F9FEG0/70-105       OS Fusarium oxysporum Fo5176
#=GS F9FEG0/70-105       DE Uncharacterized protein
#=GS F9FEG0/70-105       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex; Fusarium oxysporum; 
#=GS P69315/1-41         AC P69315
#=GS P69315/1-41         OS Linum usitatissimum
#=GS P69315/1-41         DE Polyubiquitin
#=GS P69315/1-41         DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Linaceae; Linum; Linum usitatissimum; 
#=GS F7DNS3/1-37         AC F7DNS3
#=GS F7DNS3/1-37         OS Xenopus tropicalis
#=GS F7DNS3/1-37         DE Ubiquitin C
#=GS F7DNS3/1-37         DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GF SQ 15
2gbnA00/1-84                MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGGGGGGGGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------
2gbmD00/1-84                MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGGGGGGGGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------
2gbmC00/1-84                MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGGGGGGGGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------
2gbmB00/1-84                MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGGGGGGGGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------
2gbmA00/1-84                MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGGGGGGGGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------
1zw7A00/1-82                MQIFVKTLTGATITLEVESSDTIDNVKSKIQ--------AAPGIPPDQQELIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGHHHHHH
W1PSS1/20-61                ------------------------------------------RIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG------
A7T469/1-42                 ------------------------------------------GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------
A2G7Q5/2-51                 ----------------------------TLK--------SYVKIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGGK----
A0A238FFX6/253-289          -----------------------------------------------NQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG------
F6VJQ1/1-42                 ------------------------------------------GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------
A0A151SSM7/710-746          ------------------------------------------------QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGC-----
F9FEG0/70-105               ------------------------------------------------NRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------
P69315/1-41                 -------------------------------------------IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG------
F7DNS3/1-37                 ----------------------------------------------DQQRLIFAGKQLEDG-TLSDYNIQKESTLHLVLRLRGG------
#=GC scorecons              111111111111111111111111111111100000000111344456889999999999979969989998999999999999000000
#=GC scorecons_70           ________________________________________________****************_*******************______
#=GC scorecons_80           ________________________________________________*************_**_*******************______
#=GC scorecons_90           ________________________________________________*_***********_**_*******************______
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