# STOCKHOLM 1.0
#=GF ID 3.10.20.90/FF/000306
#=GF DE Putative ubiquitin-like protein
#=GF AC 3.10.20.90/FF/000306
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 95.847
#=GS O44821/148-228   AC O44821
#=GS O44821/148-228   OS Caenorhabditis elegans
#=GS O44821/148-228   DE Uncharacterized protein
#=GS O44821/148-228   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS E9HAR8/1-78      AC E9HAR8
#=GS E9HAR8/1-78      OS Daphnia pulex
#=GS E9HAR8/1-78      DE Uncharacterized protein
#=GS E9HAR8/1-78      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS Q54V67/1-60      AC Q54V67
#=GS Q54V67/1-60      OS Dictyostelium discoideum
#=GS Q54V67/1-60      DE Uncharacterized protein
#=GS Q54V67/1-60      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS A0DL17/1-77      AC A0DL17
#=GS A0DL17/1-77      OS Paramecium tetraurelia
#=GS A0DL17/1-77      DE Uncharacterized protein
#=GS A0DL17/1-77      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS A4HAS4/2-80      AC A4HAS4
#=GS A4HAS4/2-80      OS Leishmania braziliensis
#=GS A4HAS4/2-80      DE Contig, possible fusion of chromosomes 20 and 34
#=GS A4HAS4/2-80      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS I1IJG2/1-80      AC I1IJG2
#=GS I1IJG2/1-80      OS Brachypodium distachyon
#=GS I1IJG2/1-80      DE Uncharacterized protein
#=GS I1IJG2/1-80      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A0N1IAA2/2-79  AC A0A0N1IAA2
#=GS A0A0N1IAA2/2-79  OS Leptomonas seymouri
#=GS A0A0N1IAA2/2-79  DE Ubiquitin-like protein
#=GS A0A0N1IAA2/2-79  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas seymouri; 
#=GS A0A0N0VFW3/2-80  AC A0A0N0VFW3
#=GS A0A0N0VFW3/2-80  OS Leptomonas pyrrhocoris
#=GS A0A0N0VFW3/2-80  DE Ubiquitin-like protein
#=GS A0A0N0VFW3/2-80  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas pyrrhocoris; 
#=GS A0A3Q8IFJ6/2-80  AC A0A3Q8IFJ6
#=GS A0A3Q8IFJ6/2-80  OS Leishmania donovani
#=GS A0A3Q8IFJ6/2-80  DE Ubiquitin-like protein
#=GS A0A3Q8IFJ6/2-80  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0A088RR70/2-80  AC A0A088RR70
#=GS A0A088RR70/2-80  OS Leishmania panamensis
#=GS A0A088RR70/2-80  DE Ubiquitin-like protein
#=GS A0A088RR70/2-80  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS Q4Q2Y8/2-80      AC Q4Q2Y8
#=GS Q4Q2Y8/2-80      OS Leishmania major
#=GS Q4Q2Y8/2-80      DE Ubiquitin-like protein
#=GS Q4Q2Y8/2-80      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS E9B4Z8/2-80      AC E9B4Z8
#=GS E9B4Z8/2-80      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9B4Z8/2-80      DE Ubiquitin-like protein
#=GS E9B4Z8/2-80      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A0A1E1IWW2/2-80  AC A0A1E1IWW2
#=GS A0A1E1IWW2/2-80  OS Leishmania guyanensis
#=GS A0A1E1IWW2/2-80  DE Putative ubiquitin-like protein
#=GS A0A1E1IWW2/2-80  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; 
#=GS A4IAM5/2-80      AC A4IAM5
#=GS A4IAM5/2-80      OS Leishmania infantum
#=GS A4IAM5/2-80      DE Ubiquitin-like protein
#=GS A4IAM5/2-80      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS E9BQY7/2-80      AC E9BQY7
#=GS E9BQY7/2-80      OS Leishmania donovani BPK282A1
#=GS E9BQY7/2-80      DE Ubiquitin-like protein
#=GS E9BQY7/2-80      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0A3P3Z4P8/2-80  AC A0A3P3Z4P8
#=GS A0A3P3Z4P8/2-80  OS Leishmania braziliensis MHOM/BR/75/M2904
#=GS A0A3P3Z4P8/2-80  DE Ubiquitin-like_protein
#=GS A0A3P3Z4P8/2-80  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GF SQ 16
O44821/148-228           VSVDGNFNVFVKNSTGGKTTAVS-IKNTDTIGTLKLKVQEKEGIPPNQQRLLFKGSELMDYR-TVAHCGLRQGTSLDLV-RLDA----
E9HAR8/1-78              -----EGILIHVKTVTGKTINVN-IEVTACAKDVNEKSLYMEGIPLDQQRFIYLGRQLFDEE-ILDDVRIKADSTLHLVLRFLGG---
Q54V67/1-60              ----------------------------MSVDTLKYMIYLQEGIKLNQQRLVFAGKLLEDGSRSLSDYNIQKECLIHMVLKLCGGNSQ
A0DL17/1-77              -------MQLLMSTLTGKTIAIP-FEPSDNIRKVKLKVQEFEGIPFNQQRILLEQSELDDNQ-TLSRFVIENNTMLKLLLRLKGGG--
A4HAS4/2-80              ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAGH--
I1IJG2/1-80              ------MQIYVMETRARWTIALE-VDSLDTIDEVKSKIQVKEGFPKVQQCLIFDNKQLDDGKFTLADHNIWRESTILLVL-LQPSPTR
A0A0N1IAA2/2-79          ------TFTFSVISTTGQRISISVLGPDNTVGEIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAG---
A0A0N0VFW3/2-80          ------TFTFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMFLHGGRKLEDNA-TLEECNIHAGVTINMVLALRAGC--
A0A3Q8IFJ6/2-80          ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAGR--
A0A088RR70/2-80          ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAGH--
Q4Q2Y8/2-80              ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGITINMVLALRAGR--
E9B4Z8/2-80              ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAGR--
A0A1E1IWW2/2-80          ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAGH--
A4IAM5/2-80              ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAGR--
E9BQY7/2-80              ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAGR--
A0A3P3Z4P8/2-80          ------TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNA-TLEECNIHAGVTINMVLALRAGH--
#=GC scorecons           0000002224342434534544414333456545737544399773454466536549494406745457445456468737356100
#=GC scorecons_70        ______________________________*___*_*____****_____*___*__*_*___**____*_____*_***_*______
#=GC scorecons_80        __________________________________*_*____****____________*_*____*____*________*__*______
#=GC scorecons_90        _________________________________________**______________*_*____________________________
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