# STOCKHOLM 1.0
#=GF ID 3.10.20.90/FF/000249
#=GF DE Ubiquitin D
#=GF AC 3.10.20.90/FF/000249
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 69.988
#=GS O15205/91-165       AC O15205
#=GS O15205/91-165       OS Homo sapiens
#=GS O15205/91-165       DE Ubiquitin D
#=GS O15205/91-165       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS O15205/91-165       DR GO; GO:0001650; GO:0005515; GO:0005634; GO:0005737; GO:0005829; GO:0006508; GO:0006511; GO:0016235; GO:0016567; GO:0032446; GO:0034341; GO:0034612; GO:0043011; GO:0043065; GO:0043123; GO:0043687; GO:0070628; GO:0070842; GO:1901990; 
#=GS P63072/89-162       AC P63072
#=GS P63072/89-162       OS Mus musculus
#=GS P63072/89-162       DE Ubiquitin D
#=GS P63072/89-162       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS P63072/89-162       DR GO; GO:0001650; GO:0005515; GO:0005634; GO:0005737; GO:0006511; GO:0016235; GO:0016567; GO:0032446; GO:0034341; GO:0034612; GO:0043011; GO:0043065; GO:0043123; GO:0070628; GO:0070842; GO:1901990; 
#=GS Q921A3/90-161       AC Q921A3
#=GS Q921A3/90-161       OS Rattus norvegicus
#=GS Q921A3/90-161       DE Ubiquitin D
#=GS Q921A3/90-161       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS Q921A3/90-161       DR GO; GO:0005634; GO:0005737; GO:0006511; GO:0010243; GO:0016235; GO:0016567; GO:0043011; GO:0043065; GO:0043123; GO:0070628; GO:0070842; GO:1901990; 
#=GS A0A0G2JH67/91-165   AC A0A0G2JH67
#=GS A0A0G2JH67/91-165   OS Homo sapiens
#=GS A0A0G2JH67/91-165   DE UBD
#=GS A0A0G2JH67/91-165   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A1U9X8S6/91-165   AC A0A1U9X8S6
#=GS A0A1U9X8S6/91-165   OS Homo sapiens
#=GS A0A1U9X8S6/91-165   DE UBD
#=GS A0A1U9X8S6/91-165   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A1U9X8S9/91-165   AC A0A1U9X8S9
#=GS A0A1U9X8S9/91-165   OS Homo sapiens
#=GS A0A1U9X8S9/91-165   DE UBD
#=GS A0A1U9X8S9/91-165   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS F6WF43/81-162       AC F6WF43
#=GS F6WF43/81-162       OS Ornithorhynchus anatinus
#=GS F6WF43/81-162       DE Uncharacterized protein
#=GS F6WF43/81-162       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; 
#=GS F6VVE1/85-158       AC F6VVE1
#=GS F6VVE1/85-158       OS Equus caballus
#=GS F6VVE1/85-158       DE Ubiquitin D
#=GS F6VVE1/85-158       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS A0A3Q1MHY8/104-187  AC A0A3Q1MHY8
#=GS A0A3Q1MHY8/104-187  OS Bos taurus
#=GS A0A3Q1MHY8/104-187  DE Uncharacterized protein
#=GS A0A3Q1MHY8/104-187  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS A0A2K6LT33/91-160   AC A0A2K6LT33
#=GS A0A2K6LT33/91-160   OS Rhinopithecus bieti
#=GS A0A2K6LT33/91-160   DE Uncharacterized protein
#=GS A0A2K6LT33/91-160   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; 
#=GS A0A2K5U1I5/92-160   AC A0A2K5U1I5
#=GS A0A2K5U1I5/92-160   OS Macaca fascicularis
#=GS A0A2K5U1I5/92-160   DE Uncharacterized protein
#=GS A0A2K5U1I5/92-160   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS H2PIC6/92-161       AC H2PIC6
#=GS H2PIC6/92-161       OS Pongo abelii
#=GS H2PIC6/92-161       DE UBD isoform 1
#=GS H2PIC6/92-161       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS G3R054/91-165       AC G3R054
#=GS G3R054/91-165       OS Gorilla gorilla gorilla
#=GS G3R054/91-165       DE Ubiquitin D
#=GS G3R054/91-165       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS H2QSL3/91-160       AC H2QSL3
#=GS H2QSL3/91-160       OS Pan troglodytes
#=GS H2QSL3/91-160       DE UBD isoform 1
#=GS H2QSL3/91-160       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2K5HQ64/93-159   AC A0A2K5HQ64
#=GS A0A2K5HQ64/93-159   OS Colobus angolensis palliatus
#=GS A0A2K5HQ64/93-159   DE Uncharacterized protein
#=GS A0A2K5HQ64/93-159   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; 
#=GS A0A2K5Y8C5/92-160   AC A0A2K5Y8C5
#=GS A0A2K5Y8C5/92-160   OS Mandrillus leucophaeus
#=GS A0A2K5Y8C5/92-160   DE Uncharacterized protein
#=GS A0A2K5Y8C5/92-160   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; 
#=GS A0A0D9R6U1/92-160   AC A0A0D9R6U1
#=GS A0A0D9R6U1/92-160   OS Chlorocebus sabaeus
#=GS A0A0D9R6U1/92-160   DE Uncharacterized protein
#=GS A0A0D9R6U1/92-160   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GS A0A2K5L584/92-160   AC A0A2K5L584
#=GS A0A2K5L584/92-160   OS Cercocebus atys
#=GS A0A2K5L584/92-160   DE Uncharacterized protein
#=GS A0A2K5L584/92-160   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS A0A2K6C262/92-160   AC A0A2K6C262
#=GS A0A2K6C262/92-160   OS Macaca nemestrina
#=GS A0A2K6C262/92-160   DE Uncharacterized protein
#=GS A0A2K6C262/92-160   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; 
#=GS A0A2K6NED7/92-160   AC A0A2K6NED7
#=GS A0A2K6NED7/92-160   OS Rhinopithecus roxellana
#=GS A0A2K6NED7/92-160   DE Uncharacterized protein
#=GS A0A2K6NED7/92-160   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A1D5R5X5/92-160   AC A0A1D5R5X5
#=GS A0A1D5R5X5/92-160   OS Macaca mulatta
#=GS A0A1D5R5X5/92-160   DE Uncharacterized protein
#=GS A0A1D5R5X5/92-160   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS G7P3V4/92-160       AC G7P3V4
#=GS G7P3V4/92-160       OS Macaca fascicularis
#=GS G7P3V4/92-160       DE Uncharacterized protein
#=GS G7P3V4/92-160       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS G7MRD6/92-160       AC G7MRD6
#=GS G7MRD6/92-160       OS Macaca mulatta
#=GS G7MRD6/92-160       DE Ubiquitin D
#=GS G7MRD6/92-160       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A0G2JSG8/90-161   AC A0A0G2JSG8
#=GS A0A0G2JSG8/90-161   OS Rattus norvegicus
#=GS A0A0G2JSG8/90-161   DE Ubiquitin D
#=GS A0A0G2JSG8/90-161   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS A0A3Q2I1W7/94-167   AC A0A3Q2I1W7
#=GS A0A3Q2I1W7/94-167   OS Equus caballus
#=GS A0A3Q2I1W7/94-167   DE Ubiquitin D
#=GS A0A3Q2I1W7/94-167   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS F1N0Q5/93-175       AC F1N0Q5
#=GS F1N0Q5/93-175       OS Bos taurus
#=GS F1N0Q5/93-175       DE Uncharacterized protein
#=GS F1N0Q5/93-175       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS F1MBR4/92-162       AC F1MBR4
#=GS F1MBR4/92-162       OS Bos taurus
#=GS F1MBR4/92-162       DE Uncharacterized protein
#=GS F1MBR4/92-162       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS A0A3Q1LU82/94-162   AC A0A3Q1LU82
#=GS A0A3Q1LU82/94-162   OS Bos taurus
#=GS A0A3Q1LU82/94-162   DE Uncharacterized protein
#=GS A0A3Q1LU82/94-162   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GF SQ 28
O15205/91-165               ----------FLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG-------------
P63072/89-162               -----------LVESKNEGQRHLLRVRRSSSVAQVKEMIESVTSVIPKKQVVNCNGKKLEDGKIMADYNIKSGSLLFLTTHCTGG-------------
Q921A3/90-161               -------------ESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCIGG-------------
A0A0G2JH67/91-165           ----------FLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLASYCIGG-------------
A0A1U9X8S6/91-165           ----------FLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG-------------
A0A1U9X8S9/91-165           ----------FLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLASYCIGG-------------
F6WF43/81-162               VRPSPEPVDVTLVDSRHEGQTYPLQVRRTDSVAAVQKMIQEKTGVPPQFQVVICNGKRLEAGKTMAEYGTLQKAVFFITSFC----------------
F6VVE1/85-158               -------LNVTLVESGDEGQRYLLQVRRSSSVAQVKEMIKAKTAISPKKQIVTCNGKKLEDGKTMADYGIRKDSLLFLTSH-----------------
A0A3Q1MHY8/104-187          --------------PGEGGQRHELQVRRSSSVAQVKEMIKMKTAIPPKNQIVNCNGKKLEDGKIMGDYGIKKGHLLFMTYPCIGGGHSVKEMVGEAKD
A0A2K6LT33/91-160           ----------YLVESVDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
A0A2K5U1I5/92-160           -----------LVESRDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
H2PIC6/92-161               -----------LVESGDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLASY-----------------
G3R054/91-165               ----------FLVESVDEGKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKIMADYGIRKGNLLFLASYCIGG-------------
H2QSL3/91-160               ----------FLVESVDEGKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLAS------------------
A0A2K5HQ64/93-159           -----------LVESGDEGQRHLLQVRRSSSVAQVKAMIETKTGITPETQIVNCNGKRLEDGKMMADYGIRKGN--FLTS------------------
A0A2K5Y8C5/92-160           -----------LVESGDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
A0A0D9R6U1/92-160           -----------LVESGDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
A0A2K5L584/92-160           -----------LVESGDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
A0A2K6C262/92-160           -----------LVESGDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
A0A2K6NED7/92-160           -----------LVESGDEGQRHLLRVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
A0A1D5R5X5/92-160           -----------LVESGDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
G7P3V4/92-160               -----------LVESVDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
G7MRD6/92-160               -----------LVESRDEGQRHLLQVRRSSSVAQVKAMIETKTGVTPETQIVNCNGKRLEDGKMMADYGIRKGNLLFLTS------------------
A0A0G2JSG8/90-161           -------------ESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQFVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCIGG-------------
A0A3Q2I1W7/94-167           -------LNVTLVESGDEGQRYLLQVRRSSSVAQVKEMIKAKTAISPKKQIVTCNGKKLEDGKTMADYGIRKDSLLFLTSH-----------------
F1N0Q5/93-175               ---------------GEGGQRHELQVRRSSSVAQVKEMIKMKTAIPPKNQIVNCNGKKLEDGKIMGDYGIKKGHLLFMTYPCIGGGHSVKEMVGEAKD
F1MBR4/92-162               --------------PGEGGQRHELQVRRSSSVAQVKEMIKMRTAIPPKKQIVNCNGKKLEDGKIMGDYGIKKGHLLFLTYPCIGG-------------
A0A3Q1LU82/94-162           ----------------EGGQRHELQVRRSSSVTQVKEMIKMKTAIPPKNQIVNCNGKKLEDGKIMGDYGIKKGHLLFLTYPCIGG-------------
#=GC scorecons              00000000000444656777885979998899889859964696749549795999979989959789786675779775221220000000000000
#=GC scorecons_70           ________________******_*************_**__**_*_*__***_**********_*********_*****___________________
#=GC scorecons_80           __________________****_*************_**___*___*__***_**********_*_****__*_*****___________________
#=GC scorecons_90           _______________________*_********_**_**___*___*__*_*_****_**_**_*_**_*______*_____________________
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