# STOCKHOLM 1.0 #=GF ID 2.60.40.10/FF/001866 #=GF DE T cell receptor gamma variable 3 #=GF AC 2.60.40.10/FF/001866 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 92.669 #=GS 4ndmA01/1-119 AC K7N5M4 #=GS 4ndmA01/1-119 OS Homo sapiens #=GS 4ndmA01/1-119 DE Human nkt tcr beta chain #=GS 4ndmA01/1-119 DR CATH; 4ndm; A:9-117; #=GS 4ndmA01/1-119 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P03979/17-118 AC P03979 #=GS P03979/17-118 OS Homo sapiens #=GS P03979/17-118 DE T cell receptor gamma variable 3 #=GS P03979/17-118 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P03979/17-118 DR GO; GO:0005886; GO:0006955; GO:0042287; GO:0042605; #=GS 4mnhC01/1-120 AC K7N5M4 #=GS 4mnhC01/1-120 OS Homo sapiens #=GS 4mnhC01/1-120 DE Human nkt tcr beta chain #=GS 4mnhC01/1-120 DR CATH; 4mnh; C:6-117; #=GS 4mnhC01/1-120 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 4mnhA01/1-120 AC K7N5M4 #=GS 4mnhA01/1-120 OS Homo sapiens #=GS 4mnhA01/1-120 DE Human nkt tcr beta chain #=GS 4mnhA01/1-120 DR CATH; 4mnh; A:8-117; #=GS 4mnhA01/1-120 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 4mngF02/147-262 AC Q6PJ56 #=GS 4mngF02/147-262 OS Homo sapiens #=GS 4mngF02/147-262 DE TRA@ protein #=GS 4mngF02/147-262 DR CATH; 4mng; F:147-256; #=GS 4mngF02/147-262 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 4mngE02/147-262 AC Q6PJ56 #=GS 4mngE02/147-262 OS Homo sapiens #=GS 4mngE02/147-262 DE TRA@ protein #=GS 4mngE02/147-262 DR CATH; 4mng; E:147-256; #=GS 4mngE02/147-262 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 4lhuG01/1-127 AC P0CF51 #=GS 4lhuG01/1-127 OS Homo sapiens #=GS 4lhuG01/1-127 DE T cell receptor gamma constant 1 #=GS 4lhuG01/1-127 DR CATH; 4lhu; G:10-127; #=GS 4lhuG01/1-127 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 4lfhG01/1-127 AC P0CF51 #=GS 4lfhG01/1-127 OS Homo sapiens #=GS 4lfhG01/1-127 DE T cell receptor gamma constant 1 #=GS 4lfhG01/1-127 DR CATH; 4lfh; G:10-127; #=GS 4lfhG01/1-127 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS A0A0A6YYE8/17-116 AC A0A0A6YYE8 #=GS A0A0A6YYE8/17-116 OS Mus musculus #=GS A0A0A6YYE8/17-116 DE T cell receptor gamma, variable 7 #=GS A0A0A6YYE8/17-116 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS A0A0B4J1U4/17-118 AC A0A0B4J1U4 #=GS A0A0B4J1U4/17-118 OS Homo sapiens #=GS A0A0B4J1U4/17-118 DE T cell receptor gamma variable 5 #=GS A0A0B4J1U4/17-118 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS A0A0C4DH28/18-118 AC A0A0C4DH28 #=GS A0A0C4DH28/18-118 OS Homo sapiens #=GS A0A0C4DH28/18-118 DE T cell receptor gamma variable 4 #=GS A0A0C4DH28/18-118 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS A0A075B6R0/18-118 AC A0A075B6R0 #=GS A0A075B6R0/18-118 OS Homo sapiens #=GS A0A075B6R0/18-118 DE T cell receptor gamma variable 2 #=GS A0A075B6R0/18-118 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS A0A0C4DH27/17-118 AC A0A0C4DH27 #=GS A0A0C4DH27/17-118 OS Homo sapiens #=GS A0A0C4DH27/17-118 DE T cell receptor gamma variable 8 #=GS A0A0C4DH27/17-118 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS A0A0A0MS02/18-117 AC A0A0A0MS02 #=GS A0A0A0MS02/18-117 OS Homo sapiens #=GS A0A0A0MS02/18-117 DE T cell receptor gamma variable 1 (non-functional) #=GS A0A0A0MS02/18-117 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS F6RLF8/20-121 AC F6RLF8 #=GS F6RLF8/20-121 OS Ornithorhynchus anatinus #=GS F6RLF8/20-121 DE Uncharacterized protein #=GS F6RLF8/20-121 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS A0A2J8UNG4/18-118 AC A0A2J8UNG4 #=GS A0A2J8UNG4/18-118 OS Pongo abelii #=GS A0A2J8UNG4/18-118 DE TRGV8 isoform 1 #=GS A0A2J8UNG4/18-118 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; #=GS G3SDV8/1-120 AC G3SDV8 #=GS G3SDV8/1-120 OS Gorilla gorilla gorilla #=GS G3SDV8/1-120 DE Uncharacterized protein #=GS G3SDV8/1-120 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; #=GS F6YCS2/18-112 AC F6YCS2 #=GS F6YCS2/18-112 OS Ornithorhynchus anatinus #=GS F6YCS2/18-112 DE Uncharacterized protein #=GS F6YCS2/18-112 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS K7EHZ3/86-195 AC K7EHZ3 #=GS K7EHZ3/86-195 OS Ornithorhynchus anatinus #=GS K7EHZ3/86-195 DE Uncharacterized protein #=GS K7EHZ3/86-195 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS F6TX87/17-133 AC F6TX87 #=GS F6TX87/17-133 OS Ornithorhynchus anatinus #=GS F6TX87/17-133 DE Uncharacterized protein #=GS F6TX87/17-133 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS F6Q149/17-117 AC F6Q149 #=GS F6Q149/17-117 OS Ornithorhynchus anatinus #=GS F6Q149/17-117 DE Uncharacterized protein #=GS F6Q149/17-117 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS F6VXQ9/17-117 AC F6VXQ9 #=GS F6VXQ9/17-117 OS Ornithorhynchus anatinus #=GS F6VXQ9/17-117 DE Uncharacterized protein #=GS F6VXQ9/17-117 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS F6VLD4/17-117 AC F6VLD4 #=GS F6VLD4/17-117 OS Ornithorhynchus anatinus #=GS F6VLD4/17-117 DE Uncharacterized protein #=GS F6VLD4/17-117 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS F7CDB6/19-135 AC F7CDB6 #=GS F7CDB6/19-135 OS Ornithorhynchus anatinus #=GS F7CDB6/19-135 DE Uncharacterized protein #=GS F7CDB6/19-135 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS F7F282/22-136 AC F7F282 #=GS F7F282/22-136 OS Ornithorhynchus anatinus #=GS F7F282/22-136 DE Uncharacterized protein #=GS F7F282/22-136 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS G3RR53/1-99 AC G3RR53 #=GS G3RR53/1-99 OS Gorilla gorilla gorilla #=GS G3RR53/1-99 DE Uncharacterized protein #=GS G3RR53/1-99 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; #=GS F7G888/14-139 AC F7G888 #=GS F7G888/14-139 OS Ornithorhynchus anatinus #=GS F7G888/14-139 DE Uncharacterized protein #=GS F7G888/14-139 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GF SQ 27 4ndmA01/1-119 A--DPSSNLEGGTKSVTRPTRSSAEITCDLTVI--NAFYIHWYLHQEGKAPQRLLYYDVSNSKDVLESGLSPGKYY-THTPRR-WSWILILRNLIENDSGVYYCATWDRNN------KKLFGSGTTLVVTE------ P03979/17-118 ---QKSSNLEGRTKSVTRQTGSSAEITCDLTVT--NTFYIHWYLHQEGKAPQRLLYYDVSTARDVLESGLSPGKYY-THTPRR-WSWILRLQNLIENDSGVYYCATWDR---------------------------- 4mnhC01/1-120 P--DLSSNLEGRTKSVIRQTGSSAEITCDLAEG--STGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYD-TYGSTR-KNLRMILRNLIENDSGVYYCATWDEKYYK-----KLFGSGTTLVVTE------ 4mnhA01/1-120 P--DLSSNLEGRTKSVIRQTGSSAEITCDLAEG--STGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYD-TYGSTR-KNLRMILRNLIENDSGVYYCATWDEKYYK-----KLFGSGTTLVVTE------ 4mngF02/147-262 ------------TKSVIRQTGSSAEITCDLAEG--STGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYD-TYGSTR-KNLRMILRNLIENDSGVYYCATWDEKYYK-----KLFGSGTKLIITDAASGAD 4mngE02/147-262 ------------TKSVIRQTGSSAEITCDLAEG--STGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYD-TYGSTR-KNLRMILRNLIENDSGVYYCATWDEKYYK-----KLFGSGTKLIITDAASGAD 4lhuG01/1-127 E--TGSSNLEGGTKSVTRPTRSSAEITCDLTVI--NAFYIHWYLHQEGKAPQRLLYYDVSNSKDVLESGLSPGKYY-THTPRR-WSWILILRNLIENDSGVYYCATWDRGNPKTHYYKKLFGSGTTLVVTDKQ---- 4lfhG01/1-127 E--TGSSNLEGGTKSVTRPTRSSAEITCDLTVI--NAFYIHWYLHQEGKAPQRLLYYDVSNSKDVLESGLSPGKYY-THTPRR-WSWILILRNLIENDSGVYYCATWDRGNPKTHYYKKLFGSGTTLVVTDKQ---- A0A0A6YYE8/17-116 ---QTSSNLEERIMSITKLEGSSAIMTCD-THR--TGTYIHWYRFQKGRAPEHLLYYNFVSSTTVVDSRFNLEKYH-VYEGPD-KRYKFVLRNVEESDSALYYCASWA----------------------------- A0A0B4J1U4/17-118 ---QKSSNLEGGTKSVTRPTRSSAEITCDLTVI--NAFYIHWYLHQEGKAPQRLLYYDVSNSKDVLESGLSPGKYY-THTPRR-WSWILILRNLIENDSGVYYCATWDR---------------------------- A0A0C4DH28/18-118 ----KSSNLEGRTKSVIRQTGSSAEITCDLAEG--STGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYD-TYGSTR-KNLRMILRNLIENDSGVYYCATWDG---------------------------- A0A075B6R0/18-118 ----KSSNLEGRTKSVIRQTGSSAEITCDLAEG--SNGYIHWYLHQEGKAPQRLQYYDSYNSKVVLESGVSPGKYY-TYASTR-NNLRLILRNLIENDFGVYYCATWDG---------------------------- A0A0C4DH27/17-118 ---QKSSNLEGRTKSVTRPTGSSAVITCDLPVE--NAVYTHWYLHQEGKAPQRLLYYDSYNSRVVLESGISREKYH-TYASTG-KSLKFILENLIERDSGVYYCATWDR---------------------------- A0A0A0MS02/18-117 ----ISSNLEGRTKSVTRLTGSSAEITCDLPGA--STLYIHWYLHQEGKAPQCLLYYEPYYSRVVLESGITPGKYD-T-GSTR-SNWNLRLQNLIKNDSGFYYCATWDR---------------------------- F6RLF8/20-121 ---SQISEGRRSLRPPSGKKGHSATFTCQVLHR--ASNYVHWYRVRGREPPQRLLYLSLAKSDVKWDPGMSPEKIT-AMEKQDGRSCTLSVLKLGSGDAATYYCASWD----------------------------- A0A2J8UNG4/18-118 ----KSSNLEGRTKSVTRPTGSSAEITCDLPGE--STVYIHWYLHQEGKAPQRLLYYDSYNSRVVLESGISPGKYD-TYGSTR-KNLRLILRNLIENDSGVYYCAIWDG---------------------------- G3SDV8/1-120 -----SSNLEGRTKSVIRQTGSSAEITCDLDGG--STGYIHWYLHQEGKAPQRLQYYDSYNSKVVLESGVSPGKYY-TYTSTR-KNLRLILRNLIENDSGVYYCATWDGHSDS-----DLPYTTLKICLVAASG--- F6YCS2/18-112 -----AVTLDQPVISITKKVGVLAMIPCRFSDK--RITYIHWYVPHLGRAPQRLLYYHLAKSE------VRSDKFF-VSKNKD-GSCNLLIQNLRESDAGTYYCASWDAT--------------------------- K7EHZ3/86-195 ---QTAVNIDQPIVSITRKAGTLAPFLCKFSGP--RNTYIHWYHQQPGKAPHRLLYCNVGTSKAWLESGFHSDKLL-TYKFVD-HTCTLKIQNLKKSDAGTYYCASWDSTMTQ----VPLP---------------- F6TX87/17-133 ---QTEVTTDKTMVSITKQTGTLASFFCEFSQK--SNSYIHWYLQQPGKAPQHVLYCNTETSQSTLDAGFSSSKFS-TFKSND-PSCTLKVRKVSISEAGIYYCASWDSTVTQ----FPLPFIQKNTV--------- F6Q149/17-117 ---QTALTMDQPMVSITKQTGKMASLPCEFSSR--SITYIHWYRQQPGKAPQLLLYFNLATSQQKLVSGFSSDKFY-TYKTKD-QSCTLSVRKLEVSDAGTYYCASWD----------------------------- F6VXQ9/17-117 ---QSALTMDQPVVSITRQAGKTAKILCQLSQK--SITYIHWYRQQPGKAPQRLLYYDMAASKQTLDAGFTSDKFY-AYKSKD-QSCTLTIEKLGTNDAGTYYCASWD----------------------------- F6VLD4/17-117 ---QAALSLDQPMVSITRQAGKSVKIPCELSQK--SITYIHWYRQLPEKAPQRLLYYNLATKKQTLDSGFNSEKFY-AYKYDE-QSCTLVVQNLGTSDAGIYYCASWD----------------------------- F7CDB6/19-135 -----ALTLNQPLSSITKKSGRYARLPCELSDK--SITYIHWYLQQPGKAPQRLLYYNLATSASTPESGFTSDKIY-AYKTKD-QTCMLVVEKLGTSDAGIYYCASWDSTVTK----VPLFLLQKNTVVT------- F7F282/22-136 -----ALTMNQPMVSITKQAGKSARIHCEFAQK--SITYIHWYRQQPGKAPQRLLYYNLGTSKQTLDSGFSSDKFS-AYRKKD-LNCFLEIETLGTSDAGTYYCAGWDSTVTQ----LPLLPVQKKSL--------- G3RR53/1-99 -----SSNLEGRTKSVTRPPGSSAVITCDLPVE--NAAYIHWYLHQEGKAPQRLLYYDSYNSRVVLESGISREKYH-AYASTG-KSLKFIVENLIEHDSGVYYCATWE----------------------------- F7G888/14-139 AGTNGQLELQQPKAPVIKKKGSTAFLDCKVQGTDFASAYIHWYRQRANQAPERILYLST-NGQVNFDQQQYKQKFEATKRNSD-STCTLRILKLDEKDVGTYYCASYHYYNTA----YGFLYLGLWVPLTPS----- #=GC scorecons 00011444554344766645755836595543300543989994574778977889654357434666745559630654445035436464684558585999958721001000001110010001010000000 #=GC scorecons_70 ______________****__*__*_*_*__________*****__*_**********____*___*_**____**__*__________*___**___*_*_****_**_____________________________ #=GC scorecons_80 ______________*_____*__*___*__________*****__*_*********_____*___________*___________________*___*_*_****_**_____________________________ #=GC scorecons_90 _______________________*___*__________*****______**__*_*_________________*___________________*___*___****_*______________________________ //