# STOCKHOLM 1.0
#=GF ID 2.60.250.10/FF/000001
#=GF DE Early 35 kDa protein
#=GF AC 2.60.250.10/FF/000001
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 7.028
#=GS 2funC00/1-298     AC P08160
#=GS 2funC00/1-298     OS Autographa californica nucleopolyhedrovirus
#=GS 2funC00/1-298     DE Early 35 kDa protein
#=GS 2funC00/1-298     DR CATH; 2fun; C:1002-1299; 
#=GS 2funC00/1-298     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 2funC00/1-298     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 2funA00/1-298     AC P08160
#=GS 2funA00/1-298     OS Autographa californica nucleopolyhedrovirus
#=GS 2funA00/1-298     DE Early 35 kDa protein
#=GS 2funA00/1-298     DR CATH; 2fun; A:2-299; 
#=GS 2funA00/1-298     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 2funA00/1-298     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 1p35C00/1-299     AC P08160
#=GS 1p35C00/1-299     OS Autographa californica nucleopolyhedrovirus
#=GS 1p35C00/1-299     DE Early 35 kDa protein
#=GS 1p35C00/1-299     DR CATH; 1p35; C:2-300; 
#=GS 1p35C00/1-299     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 1p35C00/1-299     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 1p35B00/1-299     AC P08160
#=GS 1p35B00/1-299     OS Autographa californica nucleopolyhedrovirus
#=GS 1p35B00/1-299     DE Early 35 kDa protein
#=GS 1p35B00/1-299     DR CATH; 1p35; B:2-299; 
#=GS 1p35B00/1-299     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 1p35B00/1-299     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 1p35A00/1-299     AC P08160
#=GS 1p35A00/1-299     OS Autographa californica nucleopolyhedrovirus
#=GS 1p35A00/1-299     DE Early 35 kDa protein
#=GS 1p35A00/1-299     DR CATH; 1p35; A:2-300; 
#=GS 1p35A00/1-299     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 1p35A00/1-299     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 1i4eA00/1-299     AC P08160
#=GS 1i4eA00/1-299     OS Autographa californica nucleopolyhedrovirus
#=GS 1i4eA00/1-299     DE Early 35 kDa protein
#=GS 1i4eA00/1-299     DR CATH; 1i4e; A:2-299; 
#=GS 1i4eA00/1-299     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 1i4eA00/1-299     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 1i3sC00/1-298     AC P08160
#=GS 1i3sC00/1-298     OS Autographa californica nucleopolyhedrovirus
#=GS 1i3sC00/1-298     DE Early 35 kDa protein
#=GS 1i3sC00/1-298     DR CATH; 1i3s; C:12-299; 
#=GS 1i3sC00/1-298     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 1i3sC00/1-298     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 1i3sB00/1-298     AC P08160
#=GS 1i3sB00/1-298     OS Autographa californica nucleopolyhedrovirus
#=GS 1i3sB00/1-298     DE Early 35 kDa protein
#=GS 1i3sB00/1-298     DR CATH; 1i3s; B:12-299; 
#=GS 1i3sB00/1-298     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 1i3sB00/1-298     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 1i3sA00/1-298     AC P08160
#=GS 1i3sA00/1-298     OS Autographa californica nucleopolyhedrovirus
#=GS 1i3sA00/1-298     DE Early 35 kDa protein
#=GS 1i3sA00/1-298     DR CATH; 1i3s; A:12-298; 
#=GS 1i3sA00/1-298     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 1i3sA00/1-298     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS 1i3pA00/1-298     AC P08160
#=GS 1i3pA00/1-298     OS Autographa californica nucleopolyhedrovirus
#=GS 1i3pA00/1-298     DE Early 35 kDa protein
#=GS 1i3pA00/1-298     DR CATH; 1i3p; A:6-298; 
#=GS 1i3pA00/1-298     DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS 1i3pA00/1-298     DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS I7B5M8/2-299      AC I7B5M8
#=GS I7B5M8/2-299      OS Bombyx mandarina nucleopolyhedrovirus S2
#=GS I7B5M8/2-299      DE p35
#=GS I7B5M8/2-299      DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Bombyx mori nucleopolyhedrovirus; 
#=GS P08160/2-299      AC P08160
#=GS P08160/2-299      OS Autographa californica nucleopolyhedrovirus
#=GS P08160/2-299      DE Early 35 kDa protein
#=GS P08160/2-299      DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS P08160/2-299      DR GO; GO:0019050; GO:0043066; GO:1900369; 
#=GS S5G9L3/2-299      AC S5G9L3
#=GS S5G9L3/2-299      OS Autographa californica nucleopolyhedrovirus
#=GS S5G9L3/2-299      DE Ac-p35
#=GS S5G9L3/2-299      DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS A0A0N7CT29/2-299  AC A0A0N7CT29
#=GS A0A0N7CT29/2-299  OS Autographa californica multiple nucleopolyhedrovirus
#=GS A0A0N7CT29/2-299  DE Annihilator
#=GS A0A0N7CT29/2-299  DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GS Q8B9C7/2-300      AC Q8B9C7
#=GS Q8B9C7/2-300      OS Rachiplusia ou MNPV (strain R1)
#=GS Q8B9C7/2-300      DE p35
#=GS Q8B9C7/2-300      DR ORG; Viruses; Baculoviridae; Alphabaculovirus; Autographa californica multiple nucleopolyhedrovirus; 
#=GF SQ 15
2funC00/1-298             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
2funA00/1-298             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
1p35C00/1-299             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIKA
1p35B00/1-299             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIKA
1p35A00/1-299             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIKA
1i4eA00/1-299             XCVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
1i3sC00/1-298             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTMLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKPDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
1i3sB00/1-298             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTMLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKPDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
1i3sA00/1-298             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTMLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKPDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
1i3pA00/1-298             -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKPDEQFDQLEKDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
I7B5M8/2-299              -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
P08160/2-299              -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
S5G9L3/2-299              -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
A0A0N7CT29/2-299          -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIK-
Q8B9C7/2-300              -CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKIDEQFDQLERDYSDQMDGLHDNIKYFKDEYYSVSCQKGSVLKSKFAKILKSHDYTDEKSIEAYEKYCLPKLVDERKDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVLAYVDNVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNRSMIYKAVEFTTESNWSSRSEKYNWKIFCNGFIYDKKSKVLYTKLHNVTSALNKNVTLNMIK-
#=GC scorecons            0999999999999999999999999999999999999699999999999999999999999999999999499999999899999999699699999997999999699999999999999999996999999999999999999699999999999999999999999999999999999999999999999999699996999999999999999999999999999999999999799999969999996906799999999999999999999999699999999999996996990
#=GC scorecons_70         _*********************************************************************_***************************************************************************************************************************************************************************************_*************************_****************_**_
#=GC scorecons_80         _************************************_********************************_*****************_**_**************_*******************_******************_**************************************************_****_*******************************************_******_*__************************_*************_**_**_
#=GC scorecons_90         _************************************_********************************_*****************_**_*******_******_*******************_******************_**************************************************_****_************************************_******_******_*___***********************_*************_**_**_
//