# STOCKHOLM 1.0
#=GF ID 2.60.200.20/FF/000047
#=GF DE Tyrosyl-DNA phosphodiesterase 1
#=GF AC 2.60.200.20/FF/000047
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 66.856
#=GS Q8H1D9/14-112      AC Q8H1D9
#=GS Q8H1D9/14-112      OS Arabidopsis thaliana
#=GS Q8H1D9/14-112      DE Tyrosyl-DNA phosphodiesterase 1
#=GS Q8H1D9/14-112      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8H1D9/14-112      DR GO; GO:0005634; GO:0006281; GO:0017005; 
#=GS A0A178UHD6/14-112  AC A0A178UHD6
#=GS A0A178UHD6/14-112  OS Arabidopsis thaliana
#=GS A0A178UHD6/14-112  DE TDP1
#=GS A0A178UHD6/14-112  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q7XHY3/21-150      AC Q7XHY3
#=GS Q7XHY3/21-150      OS Oryza sativa Japonica Group
#=GS Q7XHY3/21-150      DE Os07g0530100 protein
#=GS Q7XHY3/21-150      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS E0CVK9/14-111      AC E0CVK9
#=GS E0CVK9/14-111      OS Vitis vinifera
#=GS E0CVK9/14-111      DE Uncharacterized protein
#=GS E0CVK9/14-111      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A0A0R0K4S5/16-111  AC A0A0R0K4S5
#=GS A0A0R0K4S5/16-111  OS Glycine max
#=GS A0A0R0K4S5/16-111  DE Uncharacterized protein
#=GS A0A0R0K4S5/16-111  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS V4LGH7/14-113      AC V4LGH7
#=GS V4LGH7/14-113      OS Eutrema salsugineum
#=GS V4LGH7/14-113      DE Uncharacterized protein
#=GS V4LGH7/14-113      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A1W0W6K4/22-115  AC A0A1W0W6K4
#=GS A0A1W0W6K4/22-115  OS Sorghum bicolor
#=GS A0A1W0W6K4/22-115  DE Uncharacterized protein
#=GS A0A1W0W6K4/22-115  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS I1GTU1/24-116      AC I1GTU1
#=GS I1GTU1/24-116      OS Brachypodium distachyon
#=GS I1GTU1/24-116      DE Uncharacterized protein
#=GS I1GTU1/24-116      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS D7M6S1/14-114      AC D7M6S1
#=GS D7M6S1/14-114      OS Arabidopsis lyrata subsp. lyrata
#=GS D7M6S1/14-114      DE Uncharacterized protein
#=GS D7M6S1/14-114      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A1D6IDV5/22-115  AC A0A1D6IDV5
#=GS A0A1D6IDV5/22-115  OS Zea mays
#=GS A0A1D6IDV5/22-115  DE Tyrosyl-DNA phosphodiesterase 1
#=GS A0A1D6IDV5/22-115  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A445KX81/16-111  AC A0A445KX81
#=GS A0A445KX81/16-111  OS Glycine soja
#=GS A0A445KX81/16-111  DE Tyrosyl-DNA phosphodiesterase 1 isoform B
#=GS A0A445KX81/16-111  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GS I1QE38/21-150      AC I1QE38
#=GS I1QE38/21-150      OS Oryza glaberrima
#=GS I1QE38/21-150      DE Uncharacterized protein
#=GS I1QE38/21-150      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS A0A1B6QEP1/22-115  AC A0A1B6QEP1
#=GS A0A1B6QEP1/22-115  OS Sorghum bicolor
#=GS A0A1B6QEP1/22-115  DE Uncharacterized protein
#=GS A0A1B6QEP1/22-115  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS A0A1D6IDU7/22-115  AC A0A1D6IDU7
#=GS A0A1D6IDU7/22-115  OS Zea mays
#=GS A0A1D6IDU7/22-115  DE Tyrosyl-DNA phosphodiesterase 1
#=GS A0A1D6IDU7/22-115  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6IDV4/22-115  AC A0A1D6IDV4
#=GS A0A1D6IDV4/22-115  OS Zea mays
#=GS A0A1D6IDV4/22-115  DE Tyrosyl-DNA phosphodiesterase 1
#=GS A0A1D6IDV4/22-115  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS C0PDG6/22-115      AC C0PDG6
#=GS C0PDG6/22-115      OS Zea mays
#=GS C0PDG6/22-115      DE Tyrosyl-DNA phosphodiesterase 1
#=GS C0PDG6/22-115      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1W0W6J8/22-115  AC A0A1W0W6J8
#=GS A0A1W0W6J8/22-115  OS Sorghum bicolor
#=GS A0A1W0W6J8/22-115  DE Uncharacterized protein
#=GS A0A1W0W6J8/22-115  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS A0A1D6IDV3/22-115  AC A0A1D6IDV3
#=GS A0A1D6IDV3/22-115  OS Zea mays
#=GS A0A1D6IDV3/22-115  DE Tyrosyl-DNA phosphodiesterase 1
#=GS A0A1D6IDV3/22-115  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6IDV7/22-115  AC A0A1D6IDV7
#=GS A0A1D6IDV7/22-115  OS Zea mays
#=GS A0A1D6IDV7/22-115  DE Tyrosyl-DNA phosphodiesterase 1
#=GS A0A1D6IDV7/22-115  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1JUA2/16-111      AC I1JUA2
#=GS I1JUA2/16-111      OS Glycine max
#=GS I1JUA2/16-111      DE Uncharacterized protein
#=GS I1JUA2/16-111      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A445KWH0/16-111  AC A0A445KWH0
#=GS A0A445KWH0/16-111  OS Glycine soja
#=GS A0A445KWH0/16-111  DE Tyrosyl-DNA phosphodiesterase 1 isoform A
#=GS A0A445KWH0/16-111  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GS I1JUA1/16-111      AC I1JUA1
#=GS I1JUA1/16-111      OS Glycine max
#=GS I1JUA1/16-111      DE Uncharacterized protein
#=GS I1JUA1/16-111      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0R0KBB5/16-111  AC A0A0R0KBB5
#=GS A0A0R0KBB5/16-111  OS Glycine max
#=GS A0A0R0KBB5/16-111  DE Uncharacterized protein
#=GS A0A0R0KBB5/16-111  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GF SQ 23
Q8H1D9/14-112              ADLKEDNSSPRITLSEGPNIIGRGNVSIVDKRLSRKHITIIVSTSGSASLSVDGTNPVVIRSSGDGERKKVKPSEEVSVCNDDLIELIPGHHFFKLVLL-----------------------------------
A0A178UHD6/14-112          ADLKEDNSSPRITLSEGPNIIGRGNVSIVDKRLSRKHITIIVSTSGSASLSVDGTNPVVIRSSGDGERKKVKPSEEVSVCNDDLIELIPGHHFFKLVLL-----------------------------------
Q7XHY3/21-150              --SSSNGSVSSIPIYLGANVVGRNHLVVVDKRVSRKHLSLHASADGSIEAVVEGPNPIIVRS--EGQRRKVCAQERVKIAHDDVLELIPGEYFVKYLNVGDNHKSSTSMGSSDFKKGKRLCEDDTVVIKRNRQI
E0CVK9/14-111              RNLEEDTSTPKLPIPTGANVIGRNSISVSDKRLSRKHLTLIASGNGSVDAVVEGTNPVVVAS--GNQRKKLRTGEKAVITNDDIIELIPGHYFFKYVTVA----------------------------------
A0A0R0K4S5/16-111          -NFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLLVEGTNPIVVNS--GNKRRKLNPKEEATICNGDIIELIPGHHLFKYQVL-----------------------------------
V4LGH7/14-113              ADLKEDNSSPRINLSEGPNIIGRGNVSIADKRLSRKHITIIASTSGSASLSVEGTNPVVIRSSGGGERKKIHPREEVSLTNDDLIELIPGHHFFKLVLLP----------------------------------
A0A1W0W6K4/22-115          ---SSNGSVSNIPIFQGSNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIMVRS--NGQRRKVCATGKAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
I1GTU1/24-116              -----GASLPSIPIFEGSNVVGRSNLVVVDKRVSRKHLSLRVSADGSIEVVVEGPNPIVVQS--EGQRRRVCAKERAKIIHDDVLELIPGDYFVKYVNMG----------------------------------
D7M6S1/14-114              ADLKEDDSSPRITLSEGPNFIGRGNVSIVDKRLSRKHITIMASTSGSASLSVEGTNPVVIRSSGGGERKKVKPREEVSVSNDDLIELIPGHHFFKLVLLP---------------------------------V
A0A1D6IDV5/22-115          ---SSNGSVSSIPIFQGPNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIIVRS--KGQRRKVCAKETAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
A0A445KX81/16-111          -NFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLLVEGTNPIVVNS--GNKRRKLNPKEEATICNGDIIELIPGHHLFKYQVL-----------------------------------
I1QE38/21-150              --SSSNGSVSSIPIYLGANVVGRNHLVVVDKRVSRKHLSLHASADGSIQAVVEGPNPIIVRS--EGQRRKVCAQERVKIAHDDVLELIPGEYFVKYLNVGDNHKSSTSMGSSDFKKGKRLCEDDTVVIKRNRQI
A0A1B6QEP1/22-115          ---SSNGSVSNIPIFQGSNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIMVRS--NGQRRKVCATGKAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
A0A1D6IDU7/22-115          ---SSNGSVSSIPIFQGPNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIIVRS--KGQRRKVCAKETAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
A0A1D6IDV4/22-115          ---SSNGSVSSIPIFQGPNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIIVRS--KGQRRKVCAKETAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
C0PDG6/22-115              ---SSNGSVSSIPIFQGPNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIIVRS--KGQRRKVCAKETAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
A0A1W0W6J8/22-115          ---SSNGSVSNIPIFQGSNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIMVRS--NGQRRKVCATGKAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
A0A1D6IDV3/22-115          ---SSNGSVSSIPIFQGPNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIIVRS--KGQRRKVCAKETAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
A0A1D6IDV7/22-115          ---SSNGSVSSIPIFQGPNVVGRDHLVVVDKRISRKHLSLHASTDGSIEVVVEGPNPIIVRS--KGQRRKVCAKETAKIAHGDVLELIPGDYFVKYVDM-----------------------------------
I1JUA2/16-111              -NFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLLVEGTNPIVVNS--GNKRRKLNPKEEATICNGDIIELIPGHHLFKYQVL-----------------------------------
A0A445KWH0/16-111          -NFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLLVEGTNPIVVNS--GNKRRKLNPKEEATICNGDIIELIPGHHLFKYQVL-----------------------------------
I1JUA1/16-111              -NFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLLVEGTNPIVVNS--GNKRRKLNPKEEATICNGDIIELIPGHHLFKYQVL-----------------------------------
A0A0R0KBB5/16-111          -NFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLLVEGTNPIVVNS--GNKRRKLNPKEEATICNGDIIELIPGHHLFKYQVL-----------------------------------
#=GC scorecons             01145549564656449497799556475999699997674795599555598969976759004659786454746474669669999957759653600000000000000000000000000000000000
#=GC scorecons_70          _______*___*_*__*_*****____*_***_*****_*_**__**____***_*****_*___*_****___*_*_*___*_******_**_**______________________________________
#=GC scorecons_80          _______*________*_**_**____*_***_*****_*_**__**____***_***_*_*_____***____*___*___*__*****____*_______________________________________
#=GC scorecons_90          _______*________*_*__**______***_****_____*__**____***_**____*_____*_*____________*__*****____*_______________________________________
//