# STOCKHOLM 1.0
#=GF ID 2.60.200.20/FF/000045
#=GF DE Forkhead protein
#=GF AC 2.60.200.20/FF/000045
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 62.600
#=GS P40466/63-181      AC P40466
#=GS P40466/63-181      OS Saccharomyces cerevisiae S288C
#=GS P40466/63-181      DE Fork head protein homolog 1
#=GS P40466/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P40466/63-181      DR GO; GO:0000978; GO:0001227; GO:0001228; GO:0003682; GO:0003688; GO:0005634; GO:0005829; GO:0006338; GO:0006369; GO:0007535; GO:0019237; GO:0031124; GO:0032298; GO:0034244; GO:0043565; GO:0071406; GO:0071930; GO:0090055; GO:0090282; GO:0090419; GO:1903468; GO:2000221; 
#=GS P41813/68-188      AC P41813
#=GS P41813/68-188      OS Saccharomyces cerevisiae S288C
#=GS P41813/68-188      DE Fork head protein homolog 2
#=GS P41813/68-188      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P41813/68-188      DR GO; GO:0001085; GO:0003682; GO:0003688; GO:0003712; GO:0003713; GO:0005515; GO:0005634; GO:0005829; GO:0006338; GO:0032298; GO:0032968; GO:0043565; GO:0061186; GO:0071930; GO:0090282; GO:0090419; GO:1903468; GO:2000221; 
#=GS A0A120K1S1/49-154  AC A0A120K1S1
#=GS A0A120K1S1/49-154  OS Eremothecium sinecaudum
#=GS A0A120K1S1/49-154  DE HCL472Cp
#=GS A0A120K1S1/49-154  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium sinecaudum; 
#=GS A0A0L8RH50/59-179  AC A0A0L8RH50
#=GS A0A0L8RH50/59-179  OS Saccharomyces eubayanus
#=GS A0A0L8RH50/59-179  DE FKH1-like protein
#=GS A0A0L8RH50/59-179  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS H0GHS3/63-181      AC H0GHS3
#=GS H0GHS3/63-181      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GHS3/63-181      DE Fkh1p
#=GS H0GHS3/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VNH7/63-181  AC A0A0L8VNH7
#=GS A0A0L8VNH7/63-181  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VNH7/63-181  DE FKH1p Forkhead family transcription factor
#=GS A0A0L8VNH7/63-181  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS J8PIK2/68-186      AC J8PIK2
#=GS J8PIK2/68-186      OS Saccharomyces arboricola H-6
#=GS J8PIK2/68-186      DE Fkh2p
#=GS J8PIK2/68-186      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS Q755Z8/49-154      AC Q755Z8
#=GS Q755Z8/49-154      OS Eremothecium gossypii ATCC 10895
#=GS Q755Z8/49-154      DE AER369Cp
#=GS Q755Z8/49-154      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS I6NDK9/46-153      AC I6NDK9
#=GS I6NDK9/46-153      OS Eremothecium cymbalariae DBVPG#7215
#=GS I6NDK9/46-153      DE Uncharacterized protein
#=GS I6NDK9/46-153      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium cymbalariae; 
#=GS C8ZAY3/63-181      AC C8ZAY3
#=GS C8ZAY3/63-181      OS Saccharomyces cerevisiae EC1118
#=GS C8ZAY3/63-181      DE Fkh1p
#=GS C8ZAY3/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GUP8/63-181      AC C7GUP8
#=GS C7GUP8/63-181      OS Saccharomyces cerevisiae JAY291
#=GS C7GUP8/63-181      DE Fkh1p
#=GS C7GUP8/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WG20/63-181      AC G2WG20
#=GS G2WG20/63-181      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WG20/63-181      DE K7_Fkh1p
#=GS G2WG20/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P2E6/63-181      AC N1P2E6
#=GS N1P2E6/63-181      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P2E6/63-181      DE Fkh1p
#=GS N1P2E6/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZVE5/63-181      AC A6ZVE5
#=GS A6ZVE5/63-181      OS Saccharomyces cerevisiae YJM789
#=GS A6ZVE5/63-181      DE Forkhead protein
#=GS A6ZVE5/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VKH6/63-181      AC B5VKH6
#=GS B5VKH6/63-181      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VKH6/63-181      DE YIL131Cp-like protein
#=GS B5VKH6/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LTX8/63-181      AC B3LTX8
#=GS B3LTX8/63-181      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LTX8/63-181      DE Forkhead protein
#=GS B3LTX8/63-181      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WM36/68-188      AC G2WM36
#=GS G2WM36/68-188      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WM36/68-188      DE K7_Fkh2p
#=GS G2WM36/68-188      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0H0A9/68-187      AC H0H0A9
#=GS H0H0A9/68-187      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0H0A9/68-187      DE Fkh2p
#=GS H0H0A9/68-187      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VIP2/68-187  AC A0A0L8VIP2
#=GS A0A0L8VIP2/68-187  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VIP2/68-187  DE FKH2p Forkhead family transcription factor
#=GS A0A0L8VIP2/68-187  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS B3LNS7/68-188      AC B3LNS7
#=GS B3LNS7/68-188      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LNS7/68-188      DE Forkhead protein
#=GS B3LNS7/68-188      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZGG2/68-188      AC C8ZGG2
#=GS C8ZGG2/68-188      OS Saccharomyces cerevisiae EC1118
#=GS C8ZGG2/68-188      DE Fkh2p
#=GS C8ZGG2/68-188      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VQX6/68-188      AC B5VQX6
#=GS B5VQX6/68-188      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VQX6/68-188      DE YNL068Cp-like protein
#=GS B5VQX6/68-188      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GMM2/68-188      AC H0GMM2
#=GS H0GMM2/68-188      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GMM2/68-188      DE Fkh2p
#=GS H0GMM2/68-188      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8RCC5/68-187  AC A0A0L8RCC5
#=GS A0A0L8RCC5/68-187  OS Saccharomyces eubayanus
#=GS A0A0L8RCC5/68-187  DE FKH2-like protein
#=GS A0A0L8RCC5/68-187  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS A6ZS12/68-188      AC A6ZS12
#=GS A6ZS12/68-188      OS Saccharomyces cerevisiae YJM789
#=GS A6ZS12/68-188      DE Forkhead protein
#=GS A6ZS12/68-188      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 25
P40466/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
P41813/68-188              ---KLSGPNWTYYVKDLEVSIGRNTDPLNSALQENSDGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVVA---
A0A120K1S1/49-154          --AKISGRDWTYYVKDMFTSIGRNTSPQDQ-------------SVHIDLGPAKVVSRLHASIGFNLNTGIWELRVLGRNGAKINFHRIPSGPNTEPVPLSSGTILDIGGTQMMFILPDQGP------
A0A0L8RH50/59-179          -YAKIAGRDWTYYVQKLEVTIGRNTDSLSLNAHPDAVVQK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIIPD--
H0GHS3/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPXGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
A0A0L8VNH7/63-181          -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
J8PIK2/68-186              ---KLSGPNWTYYVKDLEVSIGRNTEPLNNPVQENSDGLKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRAHNGPKSPPIRLSSGTLLDIGGTQMMFILPDSDPV-----
Q755Z8/49-154              --AKISGRDWTYYVKDMMTSIGRNTSPQDR-------------SVHIDLGPAKVVSRQHASISFNLNTGIWELRVLGRNGAKINFHRIPSGPNTDPVPLSSGTILDIGGTQMMFILPDQGP------
I6NDK9/46-153              AYAKISGKDWTYYVKDMITSIGRNTSPQDH-------------SIHIDLGPAKVVSRQHASISFNLNTGIWELRVLGRNGAKINFHRIPSGPNTNPVPLSSGTILDIGGTQMMFILPDQGP------
C8ZAY3/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
C7GUP8/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
G2WG20/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
N1P2E6/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
A6ZVE5/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
B5VKH6/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
B3LTX8/63-181              -----AGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKK---NIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYC
G2WM36/68-188              ---KLSGPNWTYYVKDLEVSIGRNTDPLNSALQENSDGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVVA---
H0H0A9/68-187              ---KLSGPNWTYYVKDLEVSIGRNTEPLNNPLQENTDGVKTPYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHVLGRNGAKVNFQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVI----
A0A0L8VIP2/68-187          ---KLSGPNWTYYVKDLEVSIGRNTDPLNSALQENSDGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVV----
B3LNS7/68-188              ---KLSGPNWTYYVKDLEVSIGRNTDPLNSALQENSDGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNCQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVVA---
C8ZGG2/68-188              ---KLSGPNWTYYVKDLEVSIGRNTDPLNSALQENSDGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVVA---
B5VQX6/68-188              ---KLSGPNWTYYVKDLEVSIGRNTDPLNSALQENSDGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVVA---
H0GMM2/68-188              ---KLSGPNWTYYVKDLEVSIGRNTDPLNSALQENSDGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVVA---
A0A0L8RCC5/68-187          ---KLSGPTWTYYVKELEVSIGRNTEPMSNPLQENSEGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRAHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVI----
A6ZS12/68-188              ---KLSGPNWTYYVKDLEVSIGRNTDPLNSALQENSDGVKNSYRVNIDLGPAKVVSRKHAIIKYNMNIGGWELHILGRNGAKVNFQRTHNGPNNPPIRLSSGTLLDIGGTQMMFILPDSDPVVA---
#=GC scorecons             0003269469999965767699999666633333333336111575999999979997995957966594999676999999798595559965695495995669999599699997566442111
#=GC scorecons_70          ______*_*******_***_******_**_______________*_**************_*_***__*_***_***********_*___**__**__*_**_******_********_________
#=GC scorecons_80          ______*__*****__*___*****_____________________*******_***_**_*_**___*_***_*_*********_*___**___*__*_**___****_**_****__________
#=GC scorecons_90          ______*__*****______*****_____________________*******_***_**_*__*___*_***___******_**_*___**___*__*_**___****_**_****__________
//